FFCP PHASE1:Hg19::chr1:246729724..246729794,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163882 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26486 | |||
|TSSclassifier=strong | |||
|UniProt=Q6PJW8 | |||
|association_with_transcript=0bp_to_ENST00000366512,ENST00000366513,ENST00000483271_5end | |||
|description=CAGE_peak_1_at_CNST_5end | |||
|id=chr1:246729724..246729794,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.60e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.21e-35!115;UBERON:0000073!1.23e-19!94;UBERON:0001016!1.23e-19!94;UBERON:0001049!1.33e-19!57;UBERON:0005068!1.33e-19!57;UBERON:0006241!1.33e-19!57;UBERON:0007135!1.33e-19!57;UBERON:0001017!4.83e-19!82;UBERON:0005743!1.35e-18!86;UBERON:0000955!2.70e-18!69;UBERON:0006238!2.70e-18!69;UBERON:0002780!2.85e-18!41;UBERON:0001890!2.85e-18!41;UBERON:0006240!2.85e-18!41;UBERON:0003080!3.77e-18!42;UBERON:0002616!7.30e-17!59;UBERON:0001893!7.81e-16!34;UBERON:0001869!1.45e-15!32;UBERON:0002020!3.00e-15!34;UBERON:0003528!3.00e-15!34;UBERON:0002791!3.21e-15!33;UBERON:0002619!2.33e-14!22;UBERON:0001950!1.62e-13!20;UBERON:0000956!2.80e-12!25;UBERON:0000203!2.80e-12!25;UBERON:0002346!7.47e-11!90;UBERON:0003075!3.27e-10!86;UBERON:0007284!3.27e-10!86;UBERON:0003056!1.55e-08!61;UBERON:0000924!4.84e-07!173;UBERON:0006601!4.84e-07!173;UBERON:0000153!9.16e-07!129;UBERON:0007811!9.16e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.38e-14;22!UBERON:0001869;2.75e-14;32!UBERON:0001893;7.13e-14;34!UBERON:0001950;9.43e-14;20!UBERON:0002791;9.65e-14;32!UBERON:0003528;1.68e-13;34!UBERON:0002020;1.68e-13;34!UBERON:0002780;2.36e-13;41!UBERON:0001890;2.36e-13;41!UBERON:0000956;1.43e-12;25!UBERON:0000203;1.43e-12;25!UBERON:0000073;1.91e-11;53!UBERON:0002616;1.91e-11;53!UBERON:0007023;1.26e-09;114!UBERON:0000955;3.22e-09;68!UBERON:0001017;3.33e-09;75!UBERON:0001016;9.04e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.10e-35,114;UBERON:0001016,4.83e-20,89;UBERON:0001049,1.14e-19,56;UBERON:0005068,1.14e-19,56;UBERON:0006241,1.14e-19,56;UBERON:0007135,1.14e-19,56;UBERON:0000073,3.99e-19,53;UBERON:0002616,3.99e-19,53;UBERON:0001017,4.80e-19,81;UBERON:0000955,2.57e-18,68;UBERON:0006238,2.57e-18,68;UBERON:0002780,2.85e-18,41;UBERON:0001890,2.85e-18,41;UBERON:0003080,2.85e-18,41;UBERON:0006240,2.85e-18,41;UBERON:0001893,7.80e-16,34;UBERON:0001869,1.45e-15,32;UBERON:0003528,2.99e-15,34;UBERON:0002020,2.99e-15,34;UBERON:0002791,6.06e-15,32;UBERON:0002619,2.33e-14,22;UBERON:0001950,1.62e-13,20;UBERON:0000956,2.80e-12,25;UBERON:0000203,2.80e-12,25;UBERON:0002346,2.65e-11,86;UBERON:0003075,1.18e-10,82;UBERON:0007284,1.18e-10,82;UBERON:0003056,7.77e-09,61;UBERON:0004121,3.29e-07,171;UBERON:0000924,3.29e-07,171;UBERON:0006601,3.29e-07,171;UBERON:0010371,7.06e-07,104 | |||
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| |||
|short_description=p1@CNST | |||
}} |
Revision as of 01:12, 11 January 2014
Short description: | p1@CNST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNST_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000366512, ENST00000366513, ENST00000483271_5end |
EntrezGene: | CNST |
HGNC: | 26486 |
UniProt: | Q6PJW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.10e-35 | 114 |
nervous system | 4.83e-20 | 89 |
neural tube | 1.14e-19 | 56 |
neural rod | 1.14e-19 | 56 |
future spinal cord | 1.14e-19 | 56 |
neural keel | 1.14e-19 | 56 |
regional part of nervous system | 3.99e-19 | 53 |
regional part of brain | 3.99e-19 | 53 |
central nervous system | 4.80e-19 | 81 |
brain | 2.57e-18 | 68 |
future brain | 2.57e-18 | 68 |
regional part of forebrain | 2.85e-18 | 41 |
forebrain | 2.85e-18 | 41 |
anterior neural tube | 2.85e-18 | 41 |
future forebrain | 2.85e-18 | 41 |
telencephalon | 7.80e-16 | 34 |
cerebral hemisphere | 1.45e-15 | 32 |
brain grey matter | 2.99e-15 | 34 |
gray matter | 2.99e-15 | 34 |
regional part of telencephalon | 6.06e-15 | 32 |
regional part of cerebral cortex | 2.33e-14 | 22 |
neocortex | 1.62e-13 | 20 |
cerebral cortex | 2.80e-12 | 25 |
pallium | 2.80e-12 | 25 |
neurectoderm | 2.65e-11 | 86 |
neural plate | 1.18e-10 | 82 |
presumptive neural plate | 1.18e-10 | 82 |
pre-chordal neural plate | 7.77e-09 | 61 |
ectoderm-derived structure | 3.29e-07 | 171 |
ectoderm | 3.29e-07 | 171 |
presumptive ectoderm | 3.29e-07 | 171 |
ecto-epithelium | 7.06e-07 | 104 |