FFCP PHASE1:Hg19::chr10:17271799..17271813,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=169bp_to_uc001iot.1_5end | |||
|description=CAGE_peak_8_at_uc001iot.1_5end | |||
|id=chr10:17271799..17271813,- | |||
|ontology_enrichment_celltype=CL:0000055!4.06e-22!180;CL:0002371!3.37e-17!591;CL:0000144!8.72e-16!625;CL:0000048!1.11e-13!430;CL:0000723!9.08e-13!436;CL:0000057!3.79e-12!75;CL:0000222!6.85e-12!119;CL:0000034!1.05e-11!444;CL:0000183!5.09e-11!59;CL:0000187!2.91e-10!54;CL:0000548!3.88e-10!679;CL:0000004!3.88e-10!679;CL:0000255!3.88e-10!679;CL:0000680!4.03e-10!57;CL:0000056!4.03e-10!57;CL:0000355!4.03e-10!57;CL:0000012!8.08e-10!682;CL:0000192!2.98e-09!42;CL:0000514!2.98e-09!42;CL:0000393!4.61e-09!60;CL:0000211!4.61e-09!60;CL:0000359!5.00e-09!32;CL:0002320!3.34e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0002559;1.89e-07;5!CL:0000359;4.96e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.00e-11,427;CL:0000723,3.99e-11,433;CL:0000034,2.34e-10,441;CL:0000222,2.52e-08,121;CL:0000192,6.73e-08,43;CL:0000514,6.73e-08,43;CL:0000393,1.40e-07,61;CL:0000211,1.40e-07,61;CL:0000057,1.46e-07,76;CL:0000187,1.56e-07,55;CL:0002559,1.59e-07,5;CL:0000359,1.76e-07,32;CL:0000680,2.15e-07,58;CL:0000056,2.15e-07,58;CL:0000355,2.15e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.24e-14!167;UBERON:0000914!4.40e-13!83;UBERON:0002329!4.40e-13!83;UBERON:0003077!4.40e-13!83;UBERON:0003059!4.40e-13!83;UBERON:0007282!4.40e-13!83;UBERON:0009618!4.40e-13!83;UBERON:0007285!4.40e-13!83;UBERON:0002049!5.47e-13!79;UBERON:0007798!5.47e-13!79;UBERON:0004290!1.85e-12!70;UBERON:0001637!4.46e-12!42;UBERON:0003509!4.46e-12!42;UBERON:0004572!4.46e-12!42;UBERON:0003081!3.14e-11!216;UBERON:0001981!3.30e-11!60;UBERON:0007500!3.30e-11!60;UBERON:0004537!3.30e-11!60;UBERON:0006965!3.30e-11!60;UBERON:0004872!8.41e-11!84;UBERON:0004535!1.10e-10!110;UBERON:0000055!1.12e-10!69;UBERON:0001009!2.92e-10!113;UBERON:0000486!1.11e-09!82;UBERON:0001134!2.28e-09!61;UBERON:0002036!2.28e-09!61;UBERON:0003082!2.28e-09!61;UBERON:0004573!6.64e-09!33;UBERON:0004571!6.64e-09!33;UBERON:0002385!7.51e-09!63;UBERON:0001015!7.51e-09!63;UBERON:0000383!7.51e-09!63;UBERON:0000926!3.26e-08!448;UBERON:0004120!3.26e-08!448;UBERON:0006603!3.26e-08!448;UBERON:0002384!1.39e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.68e-07;14!UBERON:0002073;1.89e-07;5!UBERON:0001637;2.20e-07;42!UBERON:0003509;2.20e-07;42!UBERON:0004572;2.20e-07;42!UBERON:0004905;6.12e-07;8!UBERON:0000982;6.12e-07;8!UBERON:0004770;6.12e-07;8!UBERON:0002049;8.67e-07;75!UBERON:0007798;8.67e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.24e-11,167;UBERON:0001637,8.10e-11,42;UBERON:0003509,8.10e-11,42;UBERON:0004572,8.10e-11,42;UBERON:0002049,1.01e-10,78;UBERON:0007798,1.01e-10,78;UBERON:0000926,5.57e-10,315;UBERON:0004120,5.57e-10,315;UBERON:0006603,5.57e-10,315;UBERON:0007503,1.18e-09,78;UBERON:0007524,1.19e-09,73;UBERON:0002329,2.91e-09,71;UBERON:0003059,2.91e-09,71;UBERON:0007282,2.91e-09,71;UBERON:0004290,2.91e-09,71;UBERON:0009618,2.91e-09,71;UBERON:0003077,5.23e-09,72;UBERON:0007285,5.23e-09,72;UBERON:0007500,7.00e-09,59;UBERON:0001981,7.00e-09,59;UBERON:0004537,7.00e-09,59;UBERON:0006965,7.00e-09,59;UBERON:0000055,8.34e-09,68;UBERON:0000486,3.76e-08,83;UBERON:0001009,3.92e-08,112;UBERON:0004535,4.11e-08,109;UBERON:0001013,8.68e-08,14;UBERON:0004872,1.53e-07,83;UBERON:0002073,1.59e-07,5;UBERON:0005086,1.59e-07,5;UBERON:0004905,2.73e-07,8;UBERON:0000982,2.73e-07,8;UBERON:0004770,2.73e-07,8;UBERON:0002384,5.27e-07,371;UBERON:0004573,6.63e-07,33;UBERON:0004571,6.63e-07,33 | |||
|phase1_expression=2.18014055124668,0.642301571672949,0.281908808191942,1.0007329835313,0.893922188854576,0.872338524100369,2.53299878168311,1.26343974685366,2.61185628199839,0,0,1.09220686065086,0.527533956456907,1.36142988256051,1.98838425436749,0.672325146451775,0.602694528023977,0,0.975865597581014,0.61560529038394,1.83600622119828,5.32873026512749,1.14494394852423,1.64249310087461,2.00868223351684,0,0,0,0,0,0.464448369948228,0.919421224478927,0.30120591877825,0,0,0.142169232487422,0.293600439334847,1.10799081706375,0.601633342410425,1.73608696572681,0.223915474239924,0,0,1.89017710413434,0.377875943688809,1.4555043671269,0.464858073811369,2.05583944010913,2.16794459626573,3.16461631554365,1.2808035326455,0.709446689665756,2.41321976515633,0.645484683583826,0,1.12945403725563,0.818718450173537,0.674170453335254,1.53041946185451,0.641858054152187,3.83602275479425,0.989553900560148,0.199463657621632,0.426224750532694,1.16083695451434,1.70215567407342,1.24564449799115,0.75374599577023,1.0429658368404,1.3031330682307,2.42159801053347,0,1.26584954976354,0.211255286311942,0,0.209658645508376,0.336985893439485,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0,0,0.222820913770347,0.294605907474837,0,0.270803863765016,0.768547918354051,0.390178042679635,0.493313713811028,0.552700035571697,0,0,0,0,0.453237370790265,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0.802320587350522,0.434473211648397,0,1.34140171940727,0.895037932904712,1.44575660953827,0,4.20054904986389,0,3.89307896242109,1.03988298880475,1.33037638477538,1.93236528524877,0.130979075497713,0,0,1.9472843619281,0.522389211897802,1.99436940778298,0.715471872916026,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0.56530794192401,2.51699661725944,1.37559020970034,1.67195973229448,0,1.06729878806013,0,0.805658634218294,0,1.46437234528902,0.367663080345869,4.0507097394088,0.357198913136319,0.22452937262617,0.337834441449967,1.53316637465883,0,2.38162267109529,0,0,0,2.98183171017191,1.01304409331664,1.58891016975863,0.573673241497627,1.41867352879343,1.68203280042692,1.06748995729705,4.44001587150888,0,0.538842688278752,0.326923806226917,0.605429710579726,1.15235184896,0.234321431833797,2.49728061464256,0.570471821544449,8.51857479145266,0.469737994575059,0.485618833104395,1.54495887372473,1.22492502752936,3.93069815397658,0.516628905878827,1.18800285728205,1.7308685049499,0,0,1.34668891163253,1.00094815897571,0,0.438977620880838,4.90380473278431,1.20190447125277,0.340296549480063,0.538168907066586,0.213557388818567,0.423863802319124,2.10063767259082,0.309157587715317,2.31876486041066,0.930584281657949,1.35021065793013,0.389748020644795,3.02920529092937,0.460249493211497,0.323292113637624,0.355009592516614,0.705264687593482,0.847802961552438,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,1.56449532329816,5.14592750554308,5.52539685409922,2.3218396401599,5.0531563716871,0,0.337169380156203,0.241011029883482,0,0,0.237270619111097,0.134831308160164,0,0,0,2.80483547606892,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0.109750285408626,0,0,0.185176890317059,0.325808305310325,2.07986957055916,0,2.31860809950154,0.469634776943287,1.29929802984966,0.925971025153221,4.18559134916116,0,0,0.492434012174795,0.234004265139238,0.891786973732369,0,0,0.141775097242386,0.626909658919938,1.45316969256981,1.15014803749563,0,0.264145302039678,0.829312462163088,0.432359860250884,0.37872730027914,0.444485260045183,0,0,1.71072446022705,0.719792448923265,0.600686115687835,0.285826432630578,0,0,0.22001485746285,1.42198887333556,3.57656445851882,4.22651376278,0.26593811658487,1.04007436911366,0.257207374262142,0,1.0656887160644,0.428933980974443,0.542621605391443,0,1.62868092146868,0.710783897485092,0.791951872933429,0.904318131178758,0,0.699810938274399,0,0.502257091432126,6.32501818449095,0.479249710983165,0,0,0.579125226670317,1.02738161275192,0,0.448340575974109,0,0.646882724578552,0.385029108839245,0.76228387266739,0,1.54657762555539,0,1.91381625495949,0,2.99161459204025,0.414415513436035,1.34960640891054,4.50153468953709,1.62759014219841,2.49565033836969,1.78428988797162,1.73472656537328,1.52283839490527,0.902838299183157,0,1.03473071292505,1.99267679560631,0.921845842708516,1.12948698808508,0.587403472388222,1.37257369524342,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0.907170879989041,0.992431231275107,0.920771839728375,1.40330047216537,0.128139149255701,0.511707249066704,0.804269605718038,1.48418066444991,1.85051632563187,3.72879623157567,0.98552587216571,1.03850885836724,2.67283870457906,0,0.200506470303285,0,0.459257792658427,1.0925470080403,1.44236856455367,0,0.693138033939733,0,0,0.211103257785751,1.13733384070897,0.340187410553031,0.647747748306418,1.54227252690289,0.270946437543853,1.50506932156456,0.254876273045038,0,1.56712328305525,0,0,0.769350375349168,0.328014645699706,0.325378394664303,0.206082023295445,0,0.082509499920588,0,0,0,0.96670718292122,1.3864375540318,1.07452572308291,1.65403886981437,0.537101224341368,0.725083469571143,0.596586391912706,0.178064071293475,0,0.192190067365106,0,0.10115778085555,1.85938219718914,1.25924938732256,0,1.54016790088044,1.06461206063404,1.73986598415015,0.55597265731176,0.143124886741991,1.48863347743867,0.949138274156178,0.762520775695299,1.02359116524534,1.28381696410176,3.18203247925937,1.56989728039846,0.719489830333259,0.54907405947211,1.64937363283961,1.2130948894399,7.92551605865041,2.10629228119491,0,0.731140468893853,1.05650146756755,0.272999822815972,1.1312434556297,3.39024349860728,1.65409603063837,1.99031692572366,0.876901770507525,0,1.31178950409327,1.62328301570163,1.54911749049875,1.69017361519345,0.286822704408103,0.392996164052485,0.35667105148125,0.354761064070598,2.9555068941673,3.62224382255892,0,2.0996083214699,0.192444225451024,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0.79312517629427,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.445773537109913,0.568272293612826,0,0,0,0,0.140669416410513,0.556543525114529,0.16480387422676,0,1.59398390600856,0,0,0.102268682502155,0,1.86623752597084,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0.21787692703798,0,0.384751292518985,0,0,0,0,0.31900115973192,0.366390373607449,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0.313265848516366,0,0.802577647298789,0.468528891450678,0,0,0.485560759068186,0,0,0,0.442306057399416,0,0.311064574191741,0,0.992975867626496,0,0,0,1.24807205711825,0,0,0,0.34945333648406,0.171986032471617,0.19351266257817,0.0730893170861856,0,0.193978032976839,0.176512253383001,2.03382666702479,0.959293472527256,0.397429223405979,0,0,0,0.640358984218058,0,0,0,0,0.14405479798815,0.621262677827163,0,0.271808412147228,0.209205692624666,0,0.288950589901519,0,0.136905378891993,0,1.71906176567983,0,0,0.687481272035051,0,0,1.28767814440971,0,0.134366944973453,1.08089965062721,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0,0.0524545881349981,0.105600336519406,0.537862017998534,0,0.714695326373367,0,0.25426853765475,3.25799761052228,4.32110745600634,1.95952416065645,0,0.082092520749339,1.19271615249795,0.566560457600628,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0.592834895693833,0,0,0,0.2506898940227,0.612691153526923,0.655745261419609,0,0,0,0,0,0.110929051536852,0,0.276697269872462,0.124980407962107,0.151649117541648,0,0.705797459094515,0,0,1.94031243752936,0.701139929541673,0,0.757612021100357,1.25783950876288,0,1.37304041038154,0.756154618816195,1.5543720058278,0.443565449968902,0.159296767163702,0.449803112163605,0.776314784381297,1.24411862352257,1.06336685823198,0,0.450772826991655,0,0,0.909243296012797,0.751873899297419,1.39210127963548,0,1.60011105865261,2.74716564146234,3.36749488765919,0,0.385239660814607,0,0.260994291965212,0.680117776536817,1.62065732026684,0.489473409012935,0.895444205407437,0.308801447160972,0,0.353378291891762,0,1.35153952522458,0,0,0.607719912354764,0,0.389720617678777,0,0,0,0.737318726261158,0,1.9998739585493,0,0.344429959321631,0,0.552317850755522,0,0,0,0.323474434190045,0,0.327628914576042,0.169732529954025,0.212574920101683,0.123935764259002,0,1.27201740261367,0,0,3.17408349321616,0.918736432059601,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,1.1441462864015,0,0.198916222116275,0.376051641746286,1.81534561833168,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0.351742488719241,0,0,0,0,0,0.354809480650555,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0.111231401892069,0.156986185701028,0,0,3.65263488203798,0,1.9110067515482,0.500335809236594,0.158013611732727,0.464965701472501,0,0,0,0,0,0,0.473328002922261,0.340853619036631,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0.118920090777569,0,0,0,0,0.655678681511872,0,0.245148321753905,0,0,0,0.4226557275834,1.52934403219035,0,0.322289439867886,0.199882311849858,0,0,0,0,0,0,0.157771562193185,0,0,0,2.23197010900051,0.924351257262837,2.59575937274273,0.126166424835079,0.327796715891087,1.0135880080915,0,0,0,0.250707539292375,0.151557396436479,0,0,0,0.426467963801962,0.23806443146374,0.0645889098360061,0.0620747142958579,0.897054900644907,0.0636471582781649,0.606351566874658,0.217716747896961,0.342233301085281,0.0673520530145875,0.0717222053926763,0.665320713092027,0,0.533636729388577,0,0.538951212639521,0,0.122241444182866,0.813792356631477,0.665756774185513,0.402547587182052,0 | |||
|short_description=p8@uc001iot.1 | |||
}} |
Revision as of 01:57, 11 January 2014
Short description: | p8@uc001iot.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_uc001iot.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 169bp_to_uc001iot.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.00e-11 | 427 |
somatic stem cell | 3.99e-11 | 433 |
stem cell | 2.34e-10 | 441 |
mesodermal cell | 2.52e-08 | 121 |
smooth muscle cell | 6.73e-08 | 43 |
smooth muscle myoblast | 6.73e-08 | 43 |
electrically responsive cell | 1.40e-07 | 61 |
electrically active cell | 1.40e-07 | 61 |
fibroblast | 1.46e-07 | 76 |
muscle cell | 1.56e-07 | 55 |
hair follicle cell | 1.59e-07 | 5 |
vascular associated smooth muscle cell | 1.76e-07 | 32 |
muscle precursor cell | 2.15e-07 | 58 |
myoblast | 2.15e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.15e-07 | 58 |