FFCP PHASE1:Hg19::chr10:76781782..76781814,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:76781782..76781814,+ | |||
|id=chr10:76781782..76781814,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.40e-13!115;UBERON:0002020!1.07e-12!34;UBERON:0003528!1.07e-12!34;UBERON:0001049!1.47e-12!57;UBERON:0005068!1.47e-12!57;UBERON:0006241!1.47e-12!57;UBERON:0007135!1.47e-12!57;UBERON:0002791!4.80e-12!33;UBERON:0001893!6.27e-12!34;UBERON:0002780!6.77e-12!41;UBERON:0001890!6.77e-12!41;UBERON:0006240!6.77e-12!41;UBERON:0001869!2.95e-11!32;UBERON:0003080!2.95e-11!42;UBERON:0002619!1.35e-10!22;UBERON:0000956!9.26e-10!25;UBERON:0000203!9.26e-10!25;UBERON:0002616!9.78e-10!59;UBERON:0001017!1.71e-09!82;UBERON:0000955!2.15e-09!69;UBERON:0006238!2.15e-09!69;UBERON:0001950!2.41e-09!20;UBERON:0005743!1.19e-08!86;UBERON:0002346!2.46e-08!90;UBERON:0003075!5.92e-08!86;UBERON:0007284!5.92e-08!86;UBERON:0000073!2.03e-07!94;UBERON:0001016!2.03e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.94e-18;22!UBERON:0001950;2.90e-16;20!UBERON:0000956;1.87e-15;25!UBERON:0000203;1.87e-15;25!UBERON:0003528;1.90e-13;34!UBERON:0002020;1.90e-13;34!UBERON:0001869;1.40e-12;32!UBERON:0002791;3.38e-12;32!UBERON:0001893;6.17e-12;34!UBERON:0002780;3.31e-11;41!UBERON:0001890;3.31e-11;41!UBERON:0001871;4.26e-09;6!UBERON:0001876;8.56e-09;2!UBERON:0000073;9.52e-09;53!UBERON:0002616;9.52e-09;53!UBERON:0001872;1.68e-07;5!UBERON:0000349;1.88e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.12e-18,22;UBERON:0001950,8.43e-17,20;UBERON:0000956,5.33e-16,25;UBERON:0000203,5.33e-16,25;UBERON:0003528,1.06e-15,34;UBERON:0002020,1.06e-15,34;UBERON:0001049,3.48e-15,56;UBERON:0005068,3.48e-15,56;UBERON:0006241,3.48e-15,56;UBERON:0007135,3.48e-15,56;UBERON:0002780,9.13e-15,41;UBERON:0001890,9.13e-15,41;UBERON:0003080,9.13e-15,41;UBERON:0006240,9.13e-15,41;UBERON:0002791,2.25e-14,32;UBERON:0001869,2.25e-14,32;UBERON:0000073,2.78e-14,53;UBERON:0002616,2.78e-14,53;UBERON:0001893,2.12e-13,34;UBERON:0001017,6.22e-12,81;UBERON:0000955,1.06e-11,68;UBERON:0006238,1.06e-11,68;UBERON:0001016,2.49e-10,89;UBERON:0003075,3.44e-09,82;UBERON:0007284,3.44e-09,82;UBERON:0001871,3.87e-09,6;UBERON:0003056,5.53e-09,61;UBERON:0001876,1.13e-08,2;UBERON:0002346,1.36e-08,86;UBERON:0010371,1.58e-08,104;UBERON:0001872,9.11e-08,5;UBERON:0000349,1.71e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0,0,0,0.286235987131057,0.136874425072884,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.309868802321207,0.426507697462265,0,0,0.401088894940283,0.651032612147555,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0.822335776043652,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0,0.545812300115692,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0.398927315243264,0.426224750532694,0.580418477257168,0.56738522469114,0,0.502497330513487,1.5644487552606,0.217188844705117,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,0,0,0,0.786839080455332,0.786021525498329,2.05601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0.812411591295047,0.384273959177026,0.130059347559878,0.328875809207352,0,0,0.296573126324121,0.267540828089713,1.04535523804977,0.339928028092699,0,0,0,0,0,0,0.150575119077773,0,0,0,0,1.00803371612366,0.534880391567015,0.868946423296794,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0,0,0.491337269247072,0.103325781175765,1.18800285728205,0,0,0,0.505008341862199,0.125118519871964,0,0,0,0,0,0,0,0.635795703478686,0.300091096084402,0.206105058476878,0.257640540045629,0.37223371266318,0,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0.365921118388786,0.397589304964456,0.348581828608555,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0.352193736052904,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0,0.57191197463259,1.08524321078289,0,0,0,0,0,0,0.099972991182057,0,0,4.21667878966063,0,1.14861935834114,0,0,0,0.179060963239896,0.112085143993527,0.788123040807709,1.07813787429759,1.02674429023799,0,0,1.54657762555539,0,0,0,2.99161459204025,0,0.12269149171914,0.500170521059677,0,0.623912584592421,0.178428988797162,0.315404830067869,0,0,0,0,0.664225598535437,0,0.521301686808497,0,0,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0,0,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0,0,0.116210378459959,0.241718899183244,0,0,0.229628896329213,0.728364672026868,0.393373244878272,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.322260734604821,0.145016693914229,0.0852266274161009,0.623224249527161,0,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,0.320472213382419,0,0.245040215981032,1.11481905075431,0.144269212976445,0.142283686696828,0.159426272728822,0.199579371432817,0.191505370132367,1.05836791361941,0.649243880549111,1.40398589056729,0,0,0,0.846458889008016,0.481764225311099,0.80719882876419,0,0.343505344755765,0,0,0,0.781552381608161,0,1.23087398947712,0.270455678475983,0.66614393599564,0,0.18714054040822,0,0,0.111443384277478,0.284136146806413,0,0,0.307160702099232,2.98244294329889,1.1253553312841,0.333926115068718,0.16480387422676,0.211125408127993,0.796991953004279,0.276283915531148,1.0077309914171,0.102268682502155,0.123084805461069,0,0.179736702294654,0,0,0.789147245095469,0,0,1.93866549219044,0.463840490809256,0,0.520855522170466,3.06109999986685,0,0.910347586283997,0.254253650292766,0.236387681767936,0.344743373241465,0.291604613383254,0.173624994933292,0.885741385813839,0.964771509003264,0,1.3269511191747,0.295547618953547,0.438770794307945,0,0.139423744278603,0.153900517007594,0.113942055847001,0,0.0897576444097721,0.434589487688032,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.282706142867882,0.865554558968364,0.995261931078505,0.0884575645033392,0.611030144933625,0.296521128680622,0.370691816839509,0,0.337005664903385,0,1.1713222286267,1.27718352450966,0.19566461893209,0.242780379534093,0,2.41981432097328,0.91821828489147,0.063186579628488,0,0.103688191397247,0.664653872707185,0,0,0,0,0.693373365065693,0.347119476670262,0,0.0870592065804026,0.17472666824203,0.687944129886466,0.19351266257817,0.365446585430928,0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| |||
|short_description=p@chr10:76781782..76781814,+ | |||
}} |
Revision as of 03:35, 11 January 2014
Short description: | p@chr10:76781782..76781814, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:76781782..76781814, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.12e-18 | 22 |
neocortex | 8.43e-17 | 20 |
cerebral cortex | 5.33e-16 | 25 |
pallium | 5.33e-16 | 25 |
brain grey matter | 1.06e-15 | 34 |
gray matter | 1.06e-15 | 34 |
neural tube | 3.48e-15 | 56 |
neural rod | 3.48e-15 | 56 |
future spinal cord | 3.48e-15 | 56 |
neural keel | 3.48e-15 | 56 |
regional part of forebrain | 9.13e-15 | 41 |
forebrain | 9.13e-15 | 41 |
anterior neural tube | 9.13e-15 | 41 |
future forebrain | 9.13e-15 | 41 |
regional part of telencephalon | 2.25e-14 | 32 |
cerebral hemisphere | 2.25e-14 | 32 |
regional part of nervous system | 2.78e-14 | 53 |
regional part of brain | 2.78e-14 | 53 |
telencephalon | 2.12e-13 | 34 |
central nervous system | 6.22e-12 | 81 |
brain | 1.06e-11 | 68 |
future brain | 1.06e-11 | 68 |
nervous system | 2.49e-10 | 89 |
neural plate | 3.44e-09 | 82 |
presumptive neural plate | 3.44e-09 | 82 |
temporal lobe | 3.87e-09 | 6 |
pre-chordal neural plate | 5.53e-09 | 61 |
amygdala | 1.13e-08 | 2 |
neurectoderm | 1.36e-08 | 86 |
ecto-epithelium | 1.58e-08 | 104 |
parietal lobe | 9.11e-08 | 5 |
limbic system | 1.71e-07 | 5 |