FFCP PHASE1:Hg19::chr11:8704298..8704345,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6157 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10329 | |||
|TSSclassifier=strong | |||
|UniProt=E9PJD9,E9PLL6,E9PLX7,E9PKT2 | |||
|association_with_transcript=0bp_to_ENST00000524496,ENST00000529227,ENST00000530585,ENST00000531978,ENST00000532359,ENST00000534599_5end | |||
|coexpression_cluster_id=C270 | |||
|description=CAGE_peak_1_at_RPL27A_5end | |||
|id=chr11:8704298..8704345,+ | |||
|ontology_enrichment_celltype=CL:0000144!1.10e-23!625;CL:0000003!2.02e-22!722;CL:0002371!5.98e-22!591;CL:0000012!7.42e-22!682;CL:0000548!3.78e-20!679;CL:0000004!3.78e-20!679;CL:0000255!3.78e-20!679;CL:0000034!1.10e-17!444;CL:0000048!2.55e-16!430;CL:0000723!6.59e-16!436;CL:0000860!6.05e-15!45;CL:0002057!1.93e-14!42;CL:0000988!5.73e-12!182;CL:0002032!6.36e-12!165;CL:0000837!6.36e-12!165;CL:0000037!1.46e-11!172;CL:0000566!1.46e-11!172;CL:0002031!1.86e-11!124;CL:0000063!5.36e-10!578;CL:0002320!6.63e-10!365;CL:0000134!1.61e-09!358;CL:0002087!2.53e-09!119;CL:0000738!4.76e-09!140;CL:0000763!5.47e-09!112;CL:0000049!5.47e-09!112;CL:0002009!8.33e-09!65;CL:0000219!1.15e-08!390;CL:0000839!3.23e-08!70;CL:0000393!4.36e-08!60;CL:0000211!4.36e-08!60;CL:0002194!4.92e-08!63;CL:0000576!4.92e-08!63;CL:0000040!4.92e-08!63;CL:0000559!4.92e-08!63;CL:0000183!6.82e-08!59;CL:0000557!1.03e-07!71;CL:0000187!6.08e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-12;33!CL:0002057;1.13e-12;33!CL:0000473;1.78e-09;39!CL:0000234;1.78e-09;39!CL:0000576;4.49e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,8.98e-17,441;CL:0000048,1.88e-15,427;CL:0000723,4.74e-15,433;CL:0000860,1.93e-14,42;CL:0002057,1.93e-14,42;CL:0000473,2.20e-13,48;CL:0000234,2.20e-13,48;CL:0002032,1.43e-11,161;CL:0000837,1.43e-11,161;CL:0000988,1.89e-11,177;CL:0000037,3.27e-11,168;CL:0002031,4.00e-11,120;CL:0002320,2.57e-09,361;CL:0002087,5.28e-09,115;CL:0000134,6.05e-09,354;CL:0000738,9.99e-09,136;CL:0000763,1.13e-08,108;CL:0000049,1.13e-08,108;CL:0002009,1.58e-08,61;CL:0000219,4.06e-08,386;CL:0000839,6.28e-08,66;CL:0000393,6.79e-08,61;CL:0000211,6.79e-08,61;CL:0002194,9.40e-08,59;CL:0000576,9.40e-08,59;CL:0000040,9.40e-08,59;CL:0000559,9.40e-08,59;CL:0000557,2.03e-07,67;CL:0000187,9.23e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002057;8.98e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!7.01e-11!167;UBERON:0002384!8.86e-09!375;UBERON:0002371!4.95e-08!80;UBERON:0004290!1.62e-07!70;UBERON:0000914!2.47e-07!83;UBERON:0002329!2.47e-07!83;UBERON:0003077!2.47e-07!83;UBERON:0003059!2.47e-07!83;UBERON:0007282!2.47e-07!83;UBERON:0009618!2.47e-07!83;UBERON:0007285!2.47e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.42e-10,167;UBERON:0007503,9.43e-09,78;UBERON:0002384,3.15e-08,371;UBERON:0002371,9.87e-08,76;UBERON:0002329,2.34e-07,71;UBERON:0003059,2.34e-07,71;UBERON:0007282,2.34e-07,71;UBERON:0004290,2.34e-07,71;UBERON:0009618,2.34e-07,71;UBERON:0007524,6.46e-07,73;UBERON:0003077,6.81e-07,72;UBERON:0007285,6.81e-07,72;UBERON:0004765,7.14e-07,90 | |||
|phase1_expression=31.6120379930769,37.0393906331401,27.0632455864265,74.0542407813165,61.2336699365384,96.8295761751409,116.517943957423,43.5886712664513,66.0799639345591,94.6075655530809,253.999625141964,83.8814868979862,120.277742072175,44.9271861244969,104.390173354293,318.682119418141,289.293373451509,332.291091126255,203.467977095641,81.6292615049104,135.660459677428,118.799339440195,55.529781503425,68.0265892612234,73.0658162441752,48.7517528671929,52.0517737112656,46.3606501937571,94.0140621668881,97.492667116692,90.1029837699562,109.411125712992,105.723277491166,101.3125987857,64.9175140862928,70.8002777787359,228.127541363176,27.6997704265939,20.8566225368947,44.7042393674655,21.7198010012727,16.518576966968,17.5151385991247,112.392838576604,221.435303001642,154.040878854263,118.073950748088,217.507812763546,169.409384879622,140.681579845532,208.258654408159,240.029463336914,114.455566004557,249.157087863357,207.202524489343,114.827827120989,233.0618521494,240.229404871795,149.981107261742,223.045673817885,188.604452110717,102.583754358069,167.948399717414,147.473763684312,139.010225303092,240.571335269043,168.162007228805,110.800661378224,240.403625391713,201.985625575758,102.917915447673,229.068689584265,237.346790580663,279.068233218075,260.440267457178,312.39138180748,118.394377228406,169.399535125219,112.507910687956,236.560577305236,300.960932602223,303.222495249292,198.875756241295,176.948910048931,179.680869280438,142.95462455978,163.761958697729,173.575236866254,207.568090054447,293.848556396892,68.3055562931338,78.1025461863349,113.917421981318,359.50601373495,196.177997043538,274.44621633563,57.4392528732393,42.0521516141606,47.6995477678861,291.238874970561,390.454875427041,475.815044763407,681.89354942769,225.940406563132,415.98354135447,433.541831700147,297.342642413987,200.975280649584,198.730683071494,261.620706224449,286.298618426139,259.953367904342,365.971237883965,507.524950886186,594.807130450318,234.550339383962,390.501682980358,326.446073208498,452.90524871491,159.919837990697,288.429970058393,237.613011112094,180.991293131483,179.437228838495,84.9528940555952,144.670900998894,213.493279199472,48.184011630711,42.5229911295777,78.0603536928287,31.694892620815,110.6656418511,239.614440894776,54.2158728576849,58.1551976337632,59.5319192928986,42.1501551937083,76.8883095078165,57.4771688357533,71.175136585483,78.6121331953478,15.7174890597255,113.295834658981,138.673381601377,20.7710331938997,18.9801413656201,28.3200455905183,34.5811405242746,147.574686981273,140.039478001246,44.7215416575086,129.895423861025,52.0710752411391,46.9205591796928,89.7728793489199,40.9925882490701,101.153563803816,45.9981831321405,25.9709371761298,22.0915604424682,57.2017630294989,71.4655779375402,94.2079542135934,37.1339711149327,76.1533431008854,40.9885752823926,54.7851669207854,56.5309632026278,118.05381084873,47.4632829784064,72.5478905964413,21.0848667897701,38.7780264148325,126.467275121335,54.1699427347897,56.8570997373963,36.5449339044484,31.5520282823695,68.8056661464813,77.9341864197807,53.3744978648525,79.9202856871598,33.299580787775,77.4586364400706,82.3847991691832,72.9542801248569,69.1411109375999,84.121394028333,115.187068350388,112.953420665801,90.5659004143915,88.3107429801112,107.969253893544,90.7312211296525,59.6130180064288,76.5257796852314,49.1830718396644,35.6400857184616,35.1119039575551,80.0941998505463,110.667193839701,70.7011678607078,65.4369858930373,39.6201685142382,58.3840235771514,50.2639985110392,54.6866534420012,69.6473604602529,37.3130442232833,50.6131011500005,42.3863802319124,47.71448427742,50.5987918560735,28.0828188649736,46.3430972265659,46.919820363072,51.0569907044681,41.6515727502789,31.665165132951,230.668923080445,35.1459496591448,61.7610362135435,61.550495008707,37.106083807353,39.0026952444894,47.3227582391856,79.4048826903666,55.6625026950238,61.6989836637143,82.3068776822041,246.265150454613,343.443694890356,104.821186660977,39.8809381679589,117.414683149608,78.0138119093725,162.422883375657,229.041964877138,244.110631233091,247.277316660453,226.433526019605,253.829552367653,248.185067590207,274.786206030415,273.728943849858,301.257023889024,83.4115663725853,187.923976896617,74.083322039652,221.983154192168,22.8159062679296,37.3474342337498,25.9947558939818,43.2633837426358,33.2068784066407,165.391369127779,40.2783547449656,61.8209642916908,92.3861256462887,56.6641284370201,90.5747088762703,165.349630859453,99.5886259974386,143.753702169095,114.35606818569,38.5458415522067,261.123829093208,181.502461231807,34.7689935102081,45.4997665910282,23.1443985722153,29.484537407544,41.4680942785552,138.72607430043,156.391361353138,271.641086316412,40.6595693070931,54.9298143791388,121.915691974537,25.1258251326931,56.7031915045176,77.1260589811672,81.4277736805832,63.7524288803219,90.9924825206782,26.7391897890794,50.4035023003202,56.4539071874927,68.8944201112268,152.874616442554,184.358049046723,58.9809503656597,87.6279738354893,54.4170080791449,31.283755213382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| |||
|short_description=p1@RPL27A | |||
}} |
Revision as of 06:27, 11 January 2014
Short description: | p1@RPL27A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL27A_5end |
Coexpression cluster: | C270_CD4_Fibroblast_acute_iPS_Aortic_CD34_Smooth |
Association with transcript: | 0bp_to_ENST00000524496, ENST00000529227, ENST00000530585, ENST00000531978, ENST00000532359, ENST00000534599_5end |
EntrezGene: | RPL27A |
HGNC: | 10329 |
UniProt: | E9PJD9E9PLL6E9PLX7E9PKT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 8.98e-17 | 441 |
multi fate stem cell | 1.88e-15 | 427 |
somatic stem cell | 4.74e-15 | 433 |
classical monocyte | 1.93e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.93e-14 | 42 |
defensive cell | 2.20e-13 | 48 |
phagocyte | 2.20e-13 | 48 |
hematopoietic oligopotent progenitor cell | 1.43e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.43e-11 | 161 |
hematopoietic cell | 1.89e-11 | 177 |
hematopoietic stem cell | 3.27e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 4.00e-11 | 120 |
connective tissue cell | 2.57e-09 | 361 |
nongranular leukocyte | 5.28e-09 | 115 |
mesenchymal cell | 6.05e-09 | 354 |
leukocyte | 9.99e-09 | 136 |
myeloid cell | 1.13e-08 | 108 |
common myeloid progenitor | 1.13e-08 | 108 |
macrophage dendritic cell progenitor | 1.58e-08 | 61 |
motile cell | 4.06e-08 | 386 |
myeloid lineage restricted progenitor cell | 6.28e-08 | 66 |
electrically responsive cell | 6.79e-08 | 61 |
electrically active cell | 6.79e-08 | 61 |
monopoietic cell | 9.40e-08 | 59 |
monocyte | 9.40e-08 | 59 |
monoblast | 9.40e-08 | 59 |
promonocyte | 9.40e-08 | 59 |
granulocyte monocyte progenitor cell | 2.03e-07 | 67 |
muscle cell | 9.23e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.42e-10 | 167 |
epithelial vesicle | 9.43e-09 | 78 |
connective tissue | 3.15e-08 | 371 |
bone marrow | 9.87e-08 | 76 |
somite | 2.34e-07 | 71 |
presomitic mesoderm | 2.34e-07 | 71 |
presumptive segmental plate | 2.34e-07 | 71 |
dermomyotome | 2.34e-07 | 71 |
trunk paraxial mesoderm | 2.34e-07 | 71 |
dense mesenchyme tissue | 6.46e-07 | 73 |
paraxial mesoderm | 6.81e-07 | 72 |
presumptive paraxial mesoderm | 6.81e-07 | 72 |
skeletal element | 7.14e-07 | 90 |