FFCP PHASE1:Hg19::chr11:33279817..33279848,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10114 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4915 | |||
|TSSclassifier=strong | |||
|UniProt=E9PKD7 | |||
|association_with_transcript=-28bp_to_ENST00000456517,ENST00000531504,uc009yjv.1_5end | |||
|description=CAGE_peak_4_at_HIPK3_5end | |||
|id=chr11:33279817..33279848,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.07e-17!42;CL:0000860!4.54e-17!45;CL:0000766!2.12e-15!76;CL:0002009!5.10e-14!65;CL:0002194!5.97e-14!63;CL:0000576!5.97e-14!63;CL:0000040!5.97e-14!63;CL:0000559!5.97e-14!63;CL:0000557!1.92e-13!71;CL:0000839!9.83e-13!70;CL:0000763!4.35e-11!112;CL:0000049!4.35e-11!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.24e-15;33!CL:0002057;2.24e-15;33!CL:0000576;1.45e-14;48!CL:0000473;7.14e-12;39!CL:0000234;7.14e-12;39!CL:0000766;2.07e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.34e-21,42;CL:0002057,1.34e-21,42;CL:0000473,1.36e-19,48;CL:0000234,1.36e-19,48;CL:0000766,5.05e-18,72;CL:0002194,4.13e-17,59;CL:0000576,4.13e-17,59;CL:0000040,4.13e-17,59;CL:0000559,4.13e-17,59;CL:0002009,5.65e-17,61;CL:0000557,8.53e-16,67;CL:0000839,1.02e-14,66;CL:0000763,5.29e-13,108;CL:0000049,5.29e-13,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.52e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.59e-25!115;UBERON:0002390!7.89e-15!102;UBERON:0003061!7.89e-15!102;UBERON:0002193!2.75e-14!112;UBERON:0002371!1.30e-13!80;UBERON:0001474!9.22e-13!86;UBERON:0002405!3.65e-12!115;UBERON:0000468!1.85e-10!659;UBERON:0004765!6.45e-10!101;UBERON:0001434!6.45e-10!101;UBERON:0000062!1.12e-09!511;UBERON:0000467!1.80e-08!625;UBERON:0000480!3.04e-08!626;UBERON:0002204!1.03e-07!167;UBERON:0002050!3.15e-07!605;UBERON:0005423!3.15e-07!605;UBERON:0000923!3.58e-07!604;UBERON:0005291!3.58e-07!604;UBERON:0006598!3.58e-07!604;UBERON:0002532!3.58e-07!604;UBERON:0000922!6.68e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;7.93e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.76e-27,114;UBERON:0002390,4.54e-17,98;UBERON:0003061,4.54e-17,98;UBERON:0002193,1.29e-16,108;UBERON:0002371,3.52e-15,76;UBERON:0002405,3.64e-14,93;UBERON:0001474,5.93e-14,82;UBERON:0004765,2.99e-13,90;UBERON:0001434,1.93e-10,100;UBERON:0003081,6.76e-09,203;UBERON:0000926,1.58e-08,315;UBERON:0004120,1.58e-08,315;UBERON:0006603,1.58e-08,315;UBERON:0002204,3.88e-08,167;UBERON:0000923,7.98e-08,560;UBERON:0010316,7.98e-08,560;UBERON:0005291,7.98e-08,560;UBERON:0006598,7.98e-08,560;UBERON:0010317,7.98e-08,560;UBERON:0002532,7.98e-08,560;UBERON:0002050,2.27e-07,564;UBERON:0005423,9.30e-07,581 | |||
|phase1_expression=2.90685406832891,0.856402095563933,3.10099689011137,0,3.12872766099101,1.74467704820074,2.53299878168311,1.89515962028049,1.82829939739887,0,0,0.218441372130172,0,1.11389717664042,0.994192127183747,1.34465029290355,0,0,0,0.246242116153576,0.408001382488506,0.626909442956176,0.572471974262113,0.547497700291537,0.502170558379211,0,0,0,0.786728553697808,1.15148819429164,2.01260960310899,0.919421224478927,0.30120591877825,0.369754010166788,0.0774672005803016,0.426507697462265,2.34880351467878,2.76997704265939,1.20326668482085,1.30206522429511,1.11957737119962,0.32389366601898,1.54545340580512,2.90796477559129,2.26725566213286,2.66842467306598,3.95129362739664,1.6446715520873,3.71647645074124,4.02769349251011,3.84241059793651,4.25668013799453,5.5159308917859,2.5819387343353,2.70852973188684,4.1413314699373,2.18324920046277,2.47195832889593,5.81559395504715,4.17207735198922,3.83602275479425,4.28806690242731,3.19141852194611,3.83602275479425,2.90209238628584,0.56738522469114,3.73693349397345,4.01997864410789,3.12889751052121,3.9093992046921,2.42159801053347,3.31449872388808,3.48108626184973,3.80259515361495,3.61427309940574,3.77385561915077,5.95341745076424,5.55654503513573,5.78612112109488,3.42015292489498,7.35991705636633,7.30656615058536,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,0,5.28685314316103,0.560508562981536,1.58030450865046,0,0,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.752875595388864,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.144824403882799,7.31420598941885,7.37770945674,1.91793842765295,0.361439152384566,2.00535164254356,0.434539556882471,0.795285947051099,3.40644409211845,0.283604451492204,0.221729397462564,0.263504357079378,3.40545596294053,0.728590576585084,0.741568885568859,0.324547393654683,0.522389211897802,0.26591592103773,0.476981248610684,0,0,0,0,0,0.56530794192401,0.419499436209906,0.550236083880135,0.417989933073621,0,0.71153252537342,0.66944122552934,0,0.760272105718513,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,1.31780417436063,3.87780264148325,0,0.496971951695318,0.506522046658319,1.45650098894541,1.43418310374407,0,0.560677600142307,1.06748995729705,0,3.11211035399766,1.75123873690594,2.61539044981534,1.05950199351452,4.60940739583999,0,0.312160076830321,0.570471821544449,0.149448680551801,0.587172493218824,0.323745888736263,0.702254033511242,0.61246251376468,0.491337269247072,0.929932030581889,0,0.989067717114227,0,0,0,0.375355559615893,0.277064115484183,0,0,0.901428353439581,0.680593098960126,2.15267562826634,1.2813443329114,1.05965950579781,0.600182192168805,0.824420233907511,0.515281080091258,0.744467425326359,0.506328996723799,1.16924406193438,1.00973509697646,1.84099797284599,2.7479829659198,1.06502877754984,0.906768884048762,1.01736355386293,0.386521706326594,0.818238361772504,0.286804595389004,0,0.265059536642971,0,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,4.64367928031979,2.88751792667834,0.709840800239063,0.674338760312407,0.482022059766964,0.772057809126758,1.30727666455444,0.237270619111097,0.674156540800822,0,0,0,0,0.4115740113314,0,10.1404027857465,17.6908899001973,7.68026878685825,0,1.8448265781467,0.343135620597051,0,1.1240175325762,0.301586917234893,2.03694579348765,0,2.07986957055916,0,0,0.117408694235822,2.02113026865503,1.85194205030644,4.18559134916116,0,1.71697232418975,1.47730203652438,1.40402559083543,0.743155811443641,0.93733833986777,0.335964256397719,0.425325291727159,1.16426079513703,2.03443756959773,0.383382679165211,0.492663237895943,0.088048434013226,1.24396869324463,0.576479813667846,1.76739406796932,0.317489471460845,0,1.17217447210047,0,0.102827492703324,0.600686115687835,0,0.336393253036082,0,0.36669142910475,0.775630294546667,0,0.845302752556,0.26593811658487,0,1.02882949704857,2.83698264046557,0.532844358032199,2.7165818795048,1.08524321078289,1.64648067356154,0.977208552881205,3.19852753868291,1.58390374586686,0.301439377059586,0,0.899756920638513,2.43247561282381,0.502257091432126,0,0.479249710983165,1.14861935834114,0,0.579125226670317,3.6985738059069,1.07436577943937,0.112085143993527,0,0,0.385029108839245,1.01637849688985,0,0,0,0.637938751653163,6.74106321552464,2.99161459204025,7.87389475528467,2.57652132610194,2.50085260529839,1.08506009479894,0.623912584592421,0.535286966391485,0.788512075169673,1.52283839490527,0.300946099727719,2.27407504055985,1.03473071292505,0.664225598535437,0.737476674166813,0.260650843404249,0.391602314925481,0,2.68798433959754,1.07857100409308,1.17400313583789,0.303127571446259,0,0,1.73675465473144,0.61384789315225,0.841980283299221,1.02511319404561,3.07024349440022,1.60853921143608,0,0.462629081407967,0.532685175939381,0.410635780069046,1.03850885836724,0.232420756919918,0.120859449591622,0,0.828728900423067,2.64073230778596,0.364182336013434,1.57349297951309,0,0.15403067420883,1.56869953835371,0,0.211103257785751,0,0,0.64774774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| |||
|short_description=p4@HIPK3 | |||
}} |
Revision as of 07:08, 11 January 2014
Short description: | p4@HIPK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HIPK3_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENST00000456517, ENST00000531504, uc009yjv.1_5end |
EntrezGene: | HIPK3 |
HGNC: | 4915 |
UniProt: | E9PKD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.34e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.34e-21 | 42 |
defensive cell | 1.36e-19 | 48 |
phagocyte | 1.36e-19 | 48 |
myeloid leukocyte | 5.05e-18 | 72 |
monopoietic cell | 4.13e-17 | 59 |
monocyte | 4.13e-17 | 59 |
monoblast | 4.13e-17 | 59 |
promonocyte | 4.13e-17 | 59 |
macrophage dendritic cell progenitor | 5.65e-17 | 61 |
granulocyte monocyte progenitor cell | 8.53e-16 | 67 |
myeloid lineage restricted progenitor cell | 1.02e-14 | 66 |
myeloid cell | 5.29e-13 | 108 |
common myeloid progenitor | 5.29e-13 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.76e-27 | 114 |
hematopoietic system | 4.54e-17 | 98 |
blood island | 4.54e-17 | 98 |
hemolymphoid system | 1.29e-16 | 108 |
bone marrow | 3.52e-15 | 76 |
immune system | 3.64e-14 | 93 |
bone element | 5.93e-14 | 82 |
skeletal element | 2.99e-13 | 90 |
skeletal system | 1.93e-10 | 100 |
lateral plate mesoderm | 6.76e-09 | 203 |
mesoderm | 1.58e-08 | 315 |
mesoderm-derived structure | 1.58e-08 | 315 |
presumptive mesoderm | 1.58e-08 | 315 |
musculoskeletal system | 3.88e-08 | 167 |
germ layer | 7.98e-08 | 560 |
germ layer / neural crest | 7.98e-08 | 560 |
embryonic tissue | 7.98e-08 | 560 |
presumptive structure | 7.98e-08 | 560 |
germ layer / neural crest derived structure | 7.98e-08 | 560 |
epiblast (generic) | 7.98e-08 | 560 |
embryonic structure | 2.27e-07 | 564 |
developing anatomical structure | 9.30e-07 | 581 |