FFCP PHASE1:Hg19::chr11:33279850..33279931,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10114 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4915 | |||
|TSSclassifier=strong | |||
|UniProt=E9PKD7 | |||
|association_with_transcript=0bp_to_ENST00000456517,ENST00000531504,uc009yjv.1_5end | |||
|coexpression_cluster_id=C3145 | |||
|description=CAGE_peak_2_at_HIPK3_5end | |||
|id=chr11:33279850..33279931,+ | |||
|ontology_enrichment_celltype=CL:0000766!8.48e-27!76;CL:0002057!8.64e-26!42;CL:0000860!1.98e-24!45;CL:0002009!1.03e-23!65;CL:0000557!1.24e-23!71;CL:0000763!1.76e-23!112;CL:0000049!1.76e-23!112;CL:0002194!5.81e-23!63;CL:0000576!5.81e-23!63;CL:0000040!5.81e-23!63;CL:0000559!5.81e-23!63;CL:0000839!9.32e-21!70;CL:0000037!4.74e-11!172;CL:0000566!4.74e-11!172;CL:0002032!1.52e-10!165;CL:0000837!1.52e-10!165;CL:0000738!2.94e-10!140;CL:0000988!1.50e-09!182;CL:0002087!5.63e-08!119;CL:0002031!2.14e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.25e-23;33!CL:0002057;2.25e-23;33!CL:0000576;6.37e-21;48!CL:0000473;5.18e-19;39!CL:0000234;5.18e-19;39!CL:0000766;1.93e-15;69!CL:0000763;1.22e-10;100!CL:0000094;4.73e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.77e-34,72;CL:0000860,6.42e-31,42;CL:0002057,6.42e-31,42;CL:0000557,6.62e-30,67;CL:0002009,1.04e-29,61;CL:0000473,1.41e-29,48;CL:0000234,1.41e-29,48;CL:0000763,1.70e-29,108;CL:0000049,1.70e-29,108;CL:0002194,8.36e-29,59;CL:0000576,8.36e-29,59;CL:0000040,8.36e-29,59;CL:0000559,8.36e-29,59;CL:0000839,1.67e-26,66;CL:0000037,7.09e-15,168;CL:0002032,2.36e-14,161;CL:0000837,2.36e-14,161;CL:0000738,2.32e-13,136;CL:0000988,1.07e-12,177;CL:0002087,8.17e-11,115;CL:0002031,2.00e-10,120;CL:0000094,4.82e-07,8;CL:0002393,9.26e-07,9;CL:0002397,9.26e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-22;42!CL:0000049;6.32e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.46e-36!115;UBERON:0002390!6.74e-27!102;UBERON:0003061!6.74e-27!102;UBERON:0002193!3.41e-25!112;UBERON:0002371!7.27e-23!80;UBERON:0001474!7.63e-21!86;UBERON:0004765!3.65e-17!101;UBERON:0001434!3.65e-17!101;UBERON:0002405!1.41e-16!115;UBERON:0002204!2.03e-09!167;UBERON:0001049!8.64e-09!57;UBERON:0005068!8.64e-09!57;UBERON:0006241!8.64e-09!57;UBERON:0007135!8.64e-09!57;UBERON:0002616!5.16e-08!59;UBERON:0000955!2.09e-07!69;UBERON:0006238!2.09e-07!69;UBERON:0000479!2.11e-07!787;UBERON:0000062!2.49e-07!511;UBERON:0003080!3.81e-07!42;UBERON:0001017!4.22e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.37e-10;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.13e-41,114;UBERON:0002390,4.14e-32,98;UBERON:0003061,4.14e-32,98;UBERON:0002193,2.31e-29,108;UBERON:0002371,1.15e-28,76;UBERON:0001474,3.72e-26,82;UBERON:0004765,5.34e-25,90;UBERON:0002405,5.03e-24,93;UBERON:0001434,3.66e-22,100;UBERON:0003081,8.40e-12,203;UBERON:0002204,1.78e-11,167;UBERON:0001049,4.92e-08,56;UBERON:0005068,4.92e-08,56;UBERON:0006241,4.92e-08,56;UBERON:0007135,4.92e-08,56;UBERON:0000479,5.89e-08,773;UBERON:0000926,1.96e-07,315;UBERON:0004120,1.96e-07,315;UBERON:0006603,1.96e-07,315;UBERON:0000073,5.20e-07,53;UBERON:0002616,5.20e-07,53 | |||
|phase1_expression=2.72517568905835,2.35510576280081,1.69145284915165,1.0007329835313,1.78784437770915,0.872338524100369,0,0.631719873426831,1.30592814099919,0.491467873003018,0,0.218441372130172,0,1.11389717664042,3.64537113300707,1.34465029290355,0,0,0.487932798790507,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0.251085279189606,0,0,0,8.65401409067589,17.6561523124718,17.3394058114005,0,0,0,0.232401601740905,0.142169232487422,12.6248188913984,17.1738576644882,18.8511780621933,14.5397283379621,4.03047853631864,3.2389366601898,4.63636021741536,34.0231878744181,31.3637033261712,42.4522107078678,40.4426524215891,25.0812411693314,33.4482880566712,47.756937125477,38.9364273924233,46.5869992880513,47.91964962239,38.7290810150296,29.7938270507552,36.1425291921801,16.9201813035864,30.3376704000864,48.3612549946026,34.9812639512942,35.8028790447463,72.8971373412643,47.2728868563267,62.2288135777734,40.9195026466303,30.0714169086304,33.632401445761,40.7022837715924,40.1541847183555,41.048691649267,41.7725656817024,34.9863754188186,45.2541214040465,20.4917627722584,17.8587611970637,22.2238164238878,33.0246175570696,40.5477610672067,68.7905511063503,14.8206626745449,21.6819178147008,21.1890418366975,0,2.73069305631066,0.889509253863555,4.26730222566507,0.400395987036012,0,0,0,1.1384259382189,1.17447437874188,0.764546456250458,5.28685314316103,8.40762844472304,8.95505888235262,0,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0.296573126324121,0,0,0,0.383220493601921,0,0.253019692019503,0.95569624297229,0.651083453856419,0,3.16207750063323,0.895906278080929,4.99722906209383,3.31488152861624,4.10563998460523,0.201606743224732,0.534880391567015,0.289648807765598,2.43806866313962,3.35350429851818,1.15076305659177,0.722878304769133,1.50401373190767,1.59331170856906,0,1.94653948121054,0.189069634328136,0.443458794925128,0.175669571386252,4.97720486891308,0,0.370784442784429,1.62273696827342,1.74129737299267,2.12732736830184,0.953962497221368,0.571994910780128,0.371457501329565,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0.71153252537342,0.66944122552934,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,44.8053419282615,46.533631697799,0,0.496971951695318,0,0.926864265692532,1.14734648299525,1.41867352879343,0,0,0.24666754841716,4.97937656639626,1.34710672069688,2.61539044981534,1.51357427644931,4.60940739583999,0,0.624320153660641,1.1409436430889,0.896692083310806,0,0,0.140450806702248,0.61246251376468,0.122834317311768,0.929932030581889,1.18800285728205,1.23633464639278,0,0,0,0.375355559615893,0,0,0.919463387397059,1.35214253015937,0.226864366320042,1.25572744982203,0.640672166455702,0.847727604638247,0,0.206105058476878,1.8034837803194,0.18611685633159,1.5189869901714,0.389748020644795,1.26216887122057,0.920498986422993,1.2931684545505,2.13005755509969,0.403008392910561,0.339121184620975,0,0,0.286804595389004,0.243947412259191,0.132529768321485,0,0.10366105501537,0,0.36497735907583,1.56449532329816,0,0,0.928735856063958,0.721879481669586,0.473227200159376,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0.269662616320329,0.98110732562673,0,0,0,0.4115740113314,0,2.53510069643662,4.91413608338813,6.49868897349544,0,1.22988438543114,0,0.109750285408626,0,0.201057944823262,0.277765335475589,0,0,0,0.115930404975077,0.234817388471643,0.721832238805369,2.77791307545966,2.47330397904978,0,0,3.69325509131096,2.34004265139238,2.37809859661965,0,0.16798212819886,0.141775097242386,0.268675568108545,0.290633938513962,0,0,0.176096868026452,5.80518723514162,9.07955706526857,6.81709140502452,0,0,0,1.71072446022705,0.205654985406647,0,0,0,0.43596006883328,0.22001485746285,0.775630294546667,0,0.845302752556,0,1.04007436911366,0.257207374262142,0,0.532844358032199,1.71573592389777,0.542621605391443,0,0.977208552881205,1.06617584622764,0,0,1.74306691720059,0.299918973546171,1.2162378064119,1.50677127429638,0,0.239624855491583,1.14861935834114,1.42636905040718,1.44781306667579,2.4657158706046,0.358121926479791,0,1.37921532141349,0,1.28343036279748,0.76228387266739,0,0.773288812777695,0.335032530668698,0.637938751653163,64.4146040594577,62.8239064328452,102.360631818701,5.15304265220388,2.00068208423871,1.62759014219841,1.87173775377726,0.356857977594324,0.788512075169673,1.40569697991256,1.20378439891088,0,1.03473071292505,0,0.368738337083406,0.781952530212746,0.195801157462741,0.686286847621712,11.1654734106359,16.1785650613963,9.07184241329277,0,0,0,0.992431231275107,1.99500565274481,0.280660094433074,1.15325234330131,2.55853624533352,0.804269605718038,0,0.308419387605311,0.710246901252508,0.410635780069046,1.03850885836724,0.581051892299796,0.966875596732978,0,0.184161977871793,1.14814448164607,0.364182336013434,1.96686622439136,0,0,0,0,0.211103257785751,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0.261435451024901,0,0,0,5.15205058238611,0.183138929636687,0,0,0,0,0.676695028044854,1.07834031980251,0.921022048356777,0.964856007391714,2.47066563197029,1.59518363305651,0.93749290157711,1.15741646340759,0.661139661443912,0.960950336825531,2.4246415373971,0.4046311234222,0,0.62962469366128,2.0911118104818,0,0.532306030317022,0.869932992075073,0,0,1.116475108079,0.949138274156178,0.762520775695299,0,0.855877976067841,1.90921948755562,0,1.07923474549989,0,0.706874414074119,0,0,0,0,0,0,0.818999468447914,1.41405431953713,4.52032466480971,1.10273068709225,0,0.876901770507525,0,0.655894752046633,0,0.6196469961995,0.281695602532241,0,0.294747123039363,0,0,2.74439925886963,3.29294892959902,0,0.349934720244983,0.0962221127255121,0,0,4.61304623806218,0,0,0.443430153536676,0,31.4617517723945,42.819683599973,46.1414221611072,28.8260448303925,28.7953591160336,35.6660321155995,38.8822634811443,34.8975077569479,0.213648142254946,0,1.96032172784825,0.371606350251437,0.144269212976445,0.142283686696828,0.159426272728822,1.59663497146253,8.0432255455594,1.2700414963433,13.6341214915313,3.36956613736151,8.21644844519492,3.13359791546046,7.51903431270201,1.18504244461122,3.85411380248879,4.03599414382095,5.96184732766457,2.74804275804612,11.3679082794129,8.27601599201939,19.3545004385814,1.36771666781428,0,1.23087398947712,0,0.66614393599564,2.81974010175699,0.561421621224659,58.6032717087576,0.242721043499027,0,0,0.71623345421307,0.593929361665277,0.921482106297696,8.94732882989668,8.72150381745179,0.556543525114529,1.48323486804084,0.422250816255987,19.1278068721027,10.7750727057148,0.755798243562828,0.920418142519393,1.47701766553283,0.622079175323615,0.808815160325942,0.179021174675609,11.2545921449912,29.9875953136278,19.1586473877552,2.22273980289274,1.93866549219044,5.47331779154922,1.99613798001194,0.7812832832557,0.262379999988587,47.8499719786964,0.227586896570999,0,0,0.689486746482929,0,0.173624994933292,12.4003794013937,10.4918901604105,3.05163472634166,4.97606669690511,1.18219047581419,5.26524953169534,1.0893846351899,0.278847488557207,21.623022639567,0.113942055847001,0,0,0.325942115766024,1.91400695839152,0.0915975934018623,2.13213910407454,0,3.29658538429552,1.32969345520125,0,0.19606253431774,0.167821586975843,0.189753732724185,0,0.210998064528027,2.44849212238722,0.424059214301822,0.216388639742091,4.97630965539252,8.40346862781722,10.9985426088053,0.889563386041866,0.741383633679017,0.313265848516366,5.45949177143484,21.6695964770673,1.40558667435203,0,0.586993856796269,1.21390189767046,7.10251925128903,4.83962864194656,0.61214552326098,22.1784894495993,0.150323419414493,0.103688191397247,0,0,0,1.19472429772959,0.284609546029793,0.277349346026277,0.173559738335131,0.489961987071888,1.30588809870604,16.2495801465088,0.51595809741485,0.870806981601766,1.09633975629278,0.574808199372465,12.9965282094482,0.353024506766001,5.64951851951331,0.274083849293502,0.397429223405979,0.696418755514666,1.75996244461323,0.400794101257669,9.17847877379216,0.19980960958213,0.432271251462318,0.114536596165916,7.89336990165037,0.576219191952599,1.98804056904692,2.12124631155116,0.271808412147228,0.104602846312333,1.83596791745379,1.15580235960608,10.2071449080664,13.2798217525233,49.8211693461192,0.859530882839914,0,13.9641200636127,14.2079462887244,38.765143327148,15.7746410394203,48.9317694875691,59.8099505944218,18.0723540989294,0,0,0.157566364614447,0.329663433524666,0.26961417541674,0.393709926058995,0.677386656526276,3.97614844904652,10.3514588644797,0.160753148465019,0.550157746388935,0,10.1238251198175,8.51182150013745,1.09349201984444,0.335434687599266,4.4131196087551,2.62272940674991,0.739202355635845,0,0.191915197319445,21.440859791201,79.4510364438518,0.25426853765475,0,0.864221491201268,0.979762080328227,1.19730191562487,0.246277562248017,0.511164065356265,1.69968137280189,5.27588041241097,5.30027555648885,9.56693877075474,12.5620971655555,0.171086837884329,1.40963004463334,16.0181118851542,24.9954845108469,11.1844544943743,10.419486458051,0,0.121792598380896,1.91502377331055,50.5936557133611,36.8514144213369,45.3391453609923,47.5415314529216,1.57054096250234,3.54427271986794,3.66078794705889,9.63970166440049,25.2300046103631,16.8612158336015,7.1410863382591,0.691743174681154,0.249960815924213,0.454947352624943,5.13837600380941,0,0,0.434763085832475,1.94031243752936,3.27198633786114,3.88364103051829,1.7046270474758,3.52195062453605,1.77962244319307,1.60188047877847,3.32708032279126,0.621748802331122,1.18284119991707,0.955780602982214,0,0.931577741257556,0.829412415681711,0,0,0.150257608997218,0,1.62748293281865,0.181848659202559,0.214821114084977,0,0.398095888698616,0.800055529326307,0.343395705182793,0.673498977531838,1.26184898228651,0.385239660814607,0.214441591374926,0,0.453411851024545,0,1.22368352253234,0,0.308801447160972,0,0.176689145945881,0.192914038270915,0.168942440653073,0.256241518587947,0.345430341731199,1.21543982470953,7.46595555219346,0.974301544196942,0.398594520940089,0.163565394255844,0,0.245772908753719,0,0,11.8427819960496,2.58322469491223,0,0.552317850755522,0.139879507719444,0.622077260032973,0,0.970423302570136,0.314531883711793,0,1.18812770967818,0,1.98297222814403,2.23457967189298,1.59002175326709,0.94634094001504,0,2.46873160583479,6.4311550244172,1.79841830270087,1.41696576325585,8.77986224814332,0.82046545696302,1.00828678488687,0.96820153449905,1.77623210195036,25.6984956466478,0.588886311006154,0.353909170043221,0.917142992608395,0.577628330751691,0.762764190934334,3.4517996303005,0.198916222116275,18.426530445568,0.80682027481408,7.03362610109783,0,0.982631505060581,1.33070477595341,1.55336444622308,3.90539049306924,10.7477134180616,1.14148458349032,0.546974809018219,4.38606213485746,13.8939129949002,0.879356221798103,1.14986184875636,4.28561468702629,8.07080933325178,6.67662164660295,5.46389259243114,4.61252324845722,0.115233987555779,1.02892805662451,3.19457744991109,0.789273282754189,0.709163045303809,0.222462803784138,12.9513603203348,3.45654297815204,0.560544326627578,4.56579360254748,0.431855182437243,2.38875843943525,3.85973338553944,0.316027223465453,0.116241425368125,1.21700790611806,4.81026818838152,1.86494547746733,1.3657478167516,4.14755797088455,3.01159151174194,0.236664001461131,0.255640214277473,4.65725755210022,1.14553434272025,1.5510319283216,0.955538938977433,1.4541206133713,0.196300467230486,0.487671699929078,18.7754362784489,18.273979620412,6.95888658802919,8.25708688200537,0.233939463462106,0.596852325484105,0.356760272332706,0.11294608203896,0.109940516745429,0,5.55653938377201,1.09279780251979,0,30.1532435757304,0.235676547101626,12.5637418953565,14.8523200163543,5.4945244585842,0.509781344063451,9.77432746990477,4.25422060625609,0.199882311849858,0.178553938605658,0,0.401206833445841,17.5280733179164,5.04602211744995,9.17373332169288,0.946629373159108,0.883889372481891,0,1.5870805215462,0.743990036333503,1.84870251452567,0.865253124247578,0.756998549010474,0.764859003745869,0.126698501011437,0.61193297845189,0,0.18378979906969,0.250707539292375,13.8675017739378,2.41167717140561,13.2667110313405,8.6883716523992,15.3528466968706,10.2367705529408,0.452122368852043,3.22788514338461,1.23345048838675,16.8664969437137,7.07410161353767,15.6756058485812,19.1650648607757,4.44523549896278,19.938773099164,21.9555835320369,0.162806537221949,1.06727345877715,0,0.449126010532934,14.0784565442073,18.0917337390642,4.47585796147312,17.3096761288233,12.8815227898257,0.320568492303233 | |||
|short_description=p2@HIPK3 | |||
}} |
Revision as of 07:08, 11 January 2014
Short description: | p2@HIPK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HIPK3_5end |
Coexpression cluster: | C3145_Neutrophils_left_CD14_heart_Eosinophils_breast_mature |
Association with transcript: | 0bp_to_ENST00000456517, ENST00000531504, uc009yjv.1_5end |
EntrezGene: | HIPK3 |
HGNC: | 4915 |
UniProt: | E9PKD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.77e-34 | 72 |
classical monocyte | 6.42e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.42e-31 | 42 |
granulocyte monocyte progenitor cell | 6.62e-30 | 67 |
macrophage dendritic cell progenitor | 1.04e-29 | 61 |
defensive cell | 1.41e-29 | 48 |
phagocyte | 1.41e-29 | 48 |
myeloid cell | 1.70e-29 | 108 |
common myeloid progenitor | 1.70e-29 | 108 |
monopoietic cell | 8.36e-29 | 59 |
monocyte | 8.36e-29 | 59 |
monoblast | 8.36e-29 | 59 |
promonocyte | 8.36e-29 | 59 |
myeloid lineage restricted progenitor cell | 1.67e-26 | 66 |
hematopoietic stem cell | 7.09e-15 | 168 |
hematopoietic oligopotent progenitor cell | 2.36e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.36e-14 | 161 |
leukocyte | 2.32e-13 | 136 |
hematopoietic cell | 1.07e-12 | 177 |
nongranular leukocyte | 8.17e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.00e-10 | 120 |
granulocyte | 4.82e-07 | 8 |
intermediate monocyte | 9.26e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.26e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.13e-41 | 114 |
hematopoietic system | 4.14e-32 | 98 |
blood island | 4.14e-32 | 98 |
hemolymphoid system | 2.31e-29 | 108 |
bone marrow | 1.15e-28 | 76 |
bone element | 3.72e-26 | 82 |
skeletal element | 5.34e-25 | 90 |
immune system | 5.03e-24 | 93 |
skeletal system | 3.66e-22 | 100 |
lateral plate mesoderm | 8.40e-12 | 203 |
musculoskeletal system | 1.78e-11 | 167 |
neural tube | 4.92e-08 | 56 |
neural rod | 4.92e-08 | 56 |
future spinal cord | 4.92e-08 | 56 |
neural keel | 4.92e-08 | 56 |
tissue | 5.89e-08 | 773 |
mesoderm | 1.96e-07 | 315 |
mesoderm-derived structure | 1.96e-07 | 315 |
presumptive mesoderm | 1.96e-07 | 315 |
regional part of nervous system | 5.20e-07 | 53 |
regional part of brain | 5.20e-07 | 53 |