FFCP PHASE1:Hg19::chr11:65207858..65207904,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1149 | |||
|description=CAGE_peak_at_chr11:65207858..65207904,+ | |||
|id=chr11:65207858..65207904,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.95e-08!42;CL:0000860!7.08e-07!45 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-22!115;UBERON:0001049!3.21e-12!57;UBERON:0005068!3.21e-12!57;UBERON:0006241!3.21e-12!57;UBERON:0007135!3.21e-12!57;UBERON:0002616!6.45e-11!59;UBERON:0000955!8.89e-10!69;UBERON:0006238!8.89e-10!69;UBERON:0003080!8.17e-09!42;UBERON:0002780!2.25e-08!41;UBERON:0001890!2.25e-08!41;UBERON:0006240!2.25e-08!41;UBERON:0003075!2.75e-08!86;UBERON:0007284!2.75e-08!86;UBERON:0002346!3.97e-08!90;UBERON:0001017!1.06e-07!82;UBERON:0005743!1.26e-07!86;UBERON:0000073!1.28e-07!94;UBERON:0001016!1.28e-07!94;UBERON:0002020!5.73e-07!34;UBERON:0003528!5.73e-07!34;UBERON:0000062!9.27e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;5.83e-08;9!UBERON:0002308;5.83e-08;9!UBERON:0003528;4.37e-07;34!UBERON:0002020;4.37e-07;34!UBERON:0000073;4.67e-07;53!UBERON:0002616;4.67e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.48e-22,114;UBERON:0001049,2.02e-14,56;UBERON:0005068,2.02e-14,56;UBERON:0006241,2.02e-14,56;UBERON:0007135,2.02e-14,56;UBERON:0003075,5.45e-13,82;UBERON:0007284,5.45e-13,82;UBERON:0000073,6.08e-13,53;UBERON:0002616,6.08e-13,53;UBERON:0002346,7.03e-12,86;UBERON:0000955,1.66e-09,68;UBERON:0006238,1.66e-09,68;UBERON:0001016,1.92e-09,89;UBERON:0010371,2.36e-09,104;UBERON:0002780,3.53e-09,41;UBERON:0001890,3.53e-09,41;UBERON:0003080,3.53e-09,41;UBERON:0006240,3.53e-09,41;UBERON:0001017,3.57e-09,81;UBERON:0010314,5.08e-09,132;UBERON:0003528,1.37e-08,34;UBERON:0002020,1.37e-08,34;UBERON:0000125,7.10e-08,9;UBERON:0002308,7.10e-08,9;UBERON:0003076,6.49e-07,15;UBERON:0003057,6.49e-07,15;UBERON:0002791,7.10e-07,32 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.422863212287913,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0.251085279189606,0.229240217243854,0.164201178899891,0.157421562627358,0,0,0.77408061658038,0,0,0,0,0.426507697462265,0,3.87796785972314,4.41197784434312,4.99125002646459,1.34349284543955,0.971680998056939,0,0.872389432677388,0,0.970336244751265,0.697287110717054,0,0.619412741790207,0.863077176966451,1.7931249457037,0.236482229888585,0.344745680736619,1.93645405075148,0,1.31769637679823,0.818718450173537,0.224723484445085,0.918251677112708,1.28371610830437,0.639337125799041,0,0.997318288108159,0.852449501065388,1.16083695451434,1.13477044938228,1.24564449799115,2.51248665256743,4.17186334736161,1.08594422352558,10.2917915447673,0.736555271975129,0.632924774881769,1.05627643155971,0.637812899895131,0.419317291016752,0.561643155732475,0.450530678524519,0.964353520182481,0.570025487482497,1.19350006319454,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.786021525498329,0,0.167186495390678,0.651844533267181,0,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.896639238079726,0.650296737799391,1.15106533222573,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.579297615531196,4.87613732627923,0,0.12786256184353,7.59022220007589,0,2.462390822334,0,0.973269740605272,0.378139268656271,0.665188192387692,1.58102614247627,1.24430121722827,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0,0,0.347140501607594,0,0,0,0,1.8089173141853,0.35576626268671,0.33472061276467,0.805658634218294,0,1.46437234528902,0.367663080345869,0,0.535798369704479,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,3.87780264148325,0,2.48485975847659,0.12663051166458,1.45650098894541,3.15520282823695,0,0,0,0.49333509683432,0,0.404132016209064,0,0,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0.408308342509787,0,0.413303124703062,0,0,0,0,0.505008341862199,0,0,0,0,0,0,2.15267562826634,0.427114777637135,0.635795703478686,0.900273288253207,0.206105058476878,1.8034837803194,0.558350568994769,2.70042131586026,0.194874010322397,2.77677151668526,0.276149695926898,0.161646056818812,1.77504796258307,0,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,1.28648187638577,0,3.25057549622385,0.721879481669586,0.473227200159376,0.168584690078102,0,0.330881918197182,0.217879444092406,0,0.269662616320329,0.392442930250692,0,0.738155454624648,0,0,0,0,4.91413608338813,7.08947888017685,0,0.122988438543114,0.514703430895577,0.219500570817251,0,0.301586917234893,0.555530670951178,0,0,0,0.463721619900307,0,0,0.462985512576611,0.761016608938393,0,0,0.492434012174795,0,0.594524649154913,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0.880484340132261,0.207328115540772,0.720599767084807,0.25248486685276,0.190493682876507,0,0,0,0,0,0.571652865261156,0,0,0,0.517086863031111,0,0,0.531876233169741,0,0,0,0,0.57191197463259,0.542621605391443,0,0,0,0,0,0,0.599837947092342,0,0,0,0,0,1.42636905040718,0.144781306667579,0.61642896765115,0.358121926479791,0.224170287987055,0.591092280605782,0.431255149719035,0.898401253958239,0,0,0,0,0,2.24702107184155,5.9832291840805,2.90090859405225,0.12269149171914,0.500170521059677,0,17.0536106455262,9.99202337264106,7.41201350659493,1.05427273493442,0,0,0,0,0,0.173767228936166,0,0,0.620304078368662,1.07857100409308,0.853820462427555,0,0,0.604780586659361,0.744323423456331,4.75732117192994,0,1.28139149255701,0.511707249066704,0.321707842287215,0,0,0,0.410635780069046,0.519254429183621,0,0,0.200506470303285,2.85451065701279,0,0,0.131124414959424,0,0.231046011313244,0,0,0.316654886678627,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0.256450125116389,0.328014645699706,0,1.44257416306811,0,0.082509499920588,0,0,0,0,0.154048617114644,0.307007349452259,0.137836572484531,1.82614416276065,0.870100163485371,0.255679882248303,0.356128142586949,0.330569830721956,0,5.87018477475087,0.6069466851333,0,2.83331112147576,0,0,0,0,0,0,0.372158369359667,0.632758849437452,1.33441135746677,0,0.855877976067841,0,0,0.359744915166629,0,0.589062011728432,0,0,0,0,0.731140468893853,0,0.136499911407986,1.1312434556297,0,0,0,0,0.578775534266688,0,0,0,0,1.00387946542836,0.196498082026242,0,0,2.9555068941673,2.96365403663912,0,0,0,0,0,2.2594512186427,0,0,0,0.459446800413919,1.52234282769651,0.764637207142375,2.27858874869665,2.1440859791201,0.822724546172388,1.29694662238543,0,5.55187623405989,0.640944426764839,0.962479855263359,0.490080431962063,0,0.144269212976445,0.213425530045242,0,0,0.191505370132367,0.423347165447766,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0,0,0.278406173895242,0,0.270455678475983,0,0,0.561421621224659,0.439524537815682,0.36408156524854,0.334330152832435,0.568272293612826,0.23874448473769,0,0,0.994147647766298,1.96937182974718,2.0035566904123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| |||
|short_description=p@chr11:65207858..65207904,+ | |||
}} |
Revision as of 08:36, 11 January 2014
Short description: | p@chr11:65207858..65207904, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65207858..65207904, + |
Coexpression cluster: | C1149_skeletal_spinal_heart_medulla_globus_substantia_penis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.48e-22 | 114 |
neural tube | 2.02e-14 | 56 |
neural rod | 2.02e-14 | 56 |
future spinal cord | 2.02e-14 | 56 |
neural keel | 2.02e-14 | 56 |
neural plate | 5.45e-13 | 82 |
presumptive neural plate | 5.45e-13 | 82 |
regional part of nervous system | 6.08e-13 | 53 |
regional part of brain | 6.08e-13 | 53 |
neurectoderm | 7.03e-12 | 86 |
brain | 1.66e-09 | 68 |
future brain | 1.66e-09 | 68 |
nervous system | 1.92e-09 | 89 |
ecto-epithelium | 2.36e-09 | 104 |
regional part of forebrain | 3.53e-09 | 41 |
forebrain | 3.53e-09 | 41 |
anterior neural tube | 3.53e-09 | 41 |
future forebrain | 3.53e-09 | 41 |
central nervous system | 3.57e-09 | 81 |
structure with developmental contribution from neural crest | 5.08e-09 | 132 |
brain grey matter | 1.37e-08 | 34 |
gray matter | 1.37e-08 | 34 |
neural nucleus | 7.10e-08 | 9 |
nucleus of brain | 7.10e-08 | 9 |
posterior neural tube | 6.49e-07 | 15 |
chordal neural plate | 6.49e-07 | 15 |
regional part of telencephalon | 7.10e-07 | 32 |