FFCP PHASE1:Hg19::chr12:6309493..6309505,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=928 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1709 | |||
|TSSclassifier=strong | |||
|UniProt=P21926 | |||
|association_with_transcript=11bp_to_NM_001769_5end | |||
|coexpression_cluster_id=C3314 | |||
|description=CAGE_peak_2_at_CD9_5end | |||
|id=chr12:6309493..6309505,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.60e-18!254;CL:0002321!1.76e-14!248;CL:0002078!6.03e-14!44;CL:0000220!8.63e-14!246;CL:0000115!7.56e-13!35;CL:0000213!9.32e-12!57;CL:0000215!9.32e-12!57;CL:0002139!2.99e-10!24;CL:0000222!1.74e-09!119;CL:1000449!7.84e-09!16;CL:0000071!3.68e-08!18;CL:0002546!3.68e-08!18;CL:1000497!4.66e-08!18;CL:0002518!4.66e-08!18;CL:0002681!5.73e-08!13;CL:0002584!5.73e-08!13;CL:0000076!1.07e-07!62;CL:1000507!3.50e-07!12;CL:1000494!3.50e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.62e-11;36!CL:0002139;2.72e-10;24!CL:0002078;5.30e-10;45!CL:1000449;1.22e-08;15!CL:0000071;3.35e-08;18!CL:1000497;8.13e-08;17!CL:0002518;8.13e-08;17!CL:0002681;8.55e-08;12!CL:0002584;8.55e-08;12!CL:0000213;1.60e-07;58!CL:0000215;1.60e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.17e-17,253;CL:0002321,6.39e-15,250;CL:0002078,1.43e-14,45;CL:0000115,1.74e-13,36;CL:0000213,2.97e-12,58;CL:0000215,2.97e-12,58;CL:0002139,2.87e-10,24;CL:0000222,4.84e-10,121;CL:1000449,1.06e-08,15;CL:0000071,3.57e-08,18;CL:0002546,3.57e-08,18;CL:1000497,6.77e-08,17;CL:0002518,6.77e-08,17;CL:0002681,7.47e-08,12;CL:0002584,7.47e-08,12;CL:0000076,1.09e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;3.35e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.29e-22!659;UBERON:0000922!1.52e-20!612;UBERON:0000480!7.55e-20!626;UBERON:0000467!9.15e-20!625;UBERON:0004111!2.75e-18!241;UBERON:0000477!6.22e-18!286;UBERON:0002050!9.43e-18!605;UBERON:0005423!9.43e-18!605;UBERON:0000923!1.57e-17!604;UBERON:0005291!1.57e-17!604;UBERON:0006598!1.57e-17!604;UBERON:0002532!1.57e-17!604;UBERON:0000119!4.25e-13!312;UBERON:0000483!7.58e-13!309;UBERON:0000055!6.44e-12!69;UBERON:0000025!1.02e-11!194;UBERON:0002049!5.92e-11!79;UBERON:0007798!5.92e-11!79;UBERON:0000062!4.84e-10!511;UBERON:0001981!5.09e-10!60;UBERON:0007500!5.09e-10!60;UBERON:0004537!5.09e-10!60;UBERON:0006965!5.09e-10!60;UBERON:0003914!6.82e-10!118;UBERON:0004876!9.56e-10!20;UBERON:0000080!1.40e-09!18;UBERON:0002120!1.40e-09!18;UBERON:0004875!1.40e-09!18;UBERON:0005721!1.40e-09!18;UBERON:0005754!1.40e-09!18;UBERON:0007297!1.40e-09!18;UBERON:0000064!2.19e-09!219;UBERON:0006555!5.86e-09!17;UBERON:0005103!5.86e-09!17;UBERON:0000083!5.86e-09!17;UBERON:0009201!5.86e-09!17;UBERON:0004819!5.86e-09!17;UBERON:0006553!5.86e-09!17;UBERON:0003074!5.86e-09!17;UBERON:0003060!5.86e-09!17;UBERON:0004211!7.84e-09!16;UBERON:0001285!7.84e-09!16;UBERON:0007684!7.84e-09!16;UBERON:0003220!7.84e-09!16;UBERON:0004208!7.84e-09!16;UBERON:0000481!1.16e-08!347;UBERON:0000487!3.12e-08!22;UBERON:0001986!3.68e-08!18;UBERON:0004638!3.68e-08!18;UBERON:0004852!3.68e-08!18;UBERON:0004535!4.04e-08!110;UBERON:0003064!4.87e-08!37;UBERON:0001225!5.73e-08!13;UBERON:0008987!5.73e-08!13;UBERON:0001009!6.83e-08!113;UBERON:0001637!1.09e-07!42;UBERON:0003509!1.09e-07!42;UBERON:0004572!1.09e-07!42;UBERON:0000353!1.26e-07!17;UBERON:0001851!1.28e-07!16;UBERON:0006914!1.44e-07!25;UBERON:0000464!1.69e-07!104;UBERON:0000058!2.38e-07!26;UBERON:0009773!3.50e-07!12;UBERON:0001231!3.50e-07!12;UBERON:0004810!3.50e-07!12;UBERON:0000926!6.22e-07!448;UBERON:0004120!6.22e-07!448;UBERON:0006603!6.22e-07!448;UBERON:0004121!8.33e-07!169;UBERON:0000475!9.56e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.22e-08;15!UBERON:0004819;1.22e-08;15!UBERON:0001285;1.22e-08;15!UBERON:0007684;1.22e-08;15!UBERON:0000487;2.90e-08;22!UBERON:0004638;3.35e-08;18!UBERON:0001986;3.35e-08;18!UBERON:0004852;3.35e-08;18!UBERON:0001225;8.55e-08;12!UBERON:0008987;8.55e-08;12!UBERON:0006914;1.50e-07;25!UBERON:0003914;1.95e-07;74!UBERON:0001851;2.03e-07;15!UBERON:0000353;4.90e-07;15!UBERON:0000490;7.87e-07;33!UBERON:0001637;9.77e-07;42!UBERON:0003509;9.77e-07;42!UBERON:0004572;9.77e-07;42 | |||
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| |||
|short_description=p2@CD9 | |||
}} |
Revision as of 11:37, 11 January 2014
Short description: | p2@CD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD9_5end |
Coexpression cluster: | C3314_leiomyoma_Endothelial_Renal_Monocytederived_testicular_smallcell_mesenchymal |
Association with transcript: | 11bp_to_NM_001769_5end |
EntrezGene: | CD9 |
HGNC: | 1709 |
UniProt: | P21926 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.17e-17 | 253 |
embryonic cell | 6.39e-15 | 250 |
meso-epithelial cell | 1.43e-14 | 45 |
endothelial cell | 1.74e-13 | 36 |
lining cell | 2.97e-12 | 58 |
barrier cell | 2.97e-12 | 58 |
endothelial cell of vascular tree | 2.87e-10 | 24 |
mesodermal cell | 4.84e-10 | 121 |
epithelial cell of nephron | 1.06e-08 | 15 |
blood vessel endothelial cell | 3.57e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.57e-08 | 18 |
kidney cell | 6.77e-08 | 17 |
kidney epithelial cell | 6.77e-08 | 17 |
kidney cortical cell | 7.47e-08 | 12 |
renal cortical epithelial cell | 7.47e-08 | 12 |
squamous epithelial cell | 1.09e-07 | 63 |