FFCP PHASE1:Hg19::chr12:6484722..6484736,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6337 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10599 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000542260,ENST00000544882_5end | |||
|coexpression_cluster_id=C3317 | |||
|description=CAGE_peak_2_at_SCNN1A_5end | |||
|id=chr12:6484722..6484736,- | |||
|ontology_enrichment_celltype=CL:0000066!1.07e-23!254;CL:0002076!7.81e-17!43;CL:0000223!1.63e-16!59;CL:0002368!6.27e-11!13;CL:0002202!3.90e-08!9;CL:0002632!3.90e-08!9;CL:0000082!6.72e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.85e-14;42!CL:0002368;6.93e-12;13!CL:1000507;7.91e-09;10!CL:1000494;7.91e-09;10!CL:0002202;2.49e-08;9!CL:0002632;2.49e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.59e-20,253;CL:0002076,3.55e-18,42;CL:0000223,5.17e-17,58;CL:0002368,6.87e-12,13;CL:1000507,7.80e-09,10;CL:1000494,7.80e-09,10;CL:0002202,2.38e-08,9;CL:0002632,2.38e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000223;3.24e-09;58!UBERON:0006595;4.42e-07;86!UBERON:0009117;8.97e-07;10!UBERON:0005564;8.97e-07;10 | |||
|ontology_enrichment_disease=DOID:305!2.22e-16!106;DOID:0050687!1.27e-11!143;DOID:299!1.44e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;4.47e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.55e-15,106;DOID:299,4.05e-10,25;DOID:0050687,6.30e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.64e-26!169;UBERON:0000925!4.64e-26!169;UBERON:0006595!4.64e-26!169;UBERON:0004921!3.50e-21!129;UBERON:0004185!3.50e-21!129;UBERON:0001007!9.62e-21!155;UBERON:0001555!9.62e-21!155;UBERON:0007026!9.62e-21!155;UBERON:0000464!2.97e-20!104;UBERON:0000466!1.54e-19!126;UBERON:0000077!1.34e-18!130;UBERON:0005177!6.28e-15!107;UBERON:0001041!2.35e-13!98;UBERON:0001008!1.74e-12!45;UBERON:0005153!2.73e-12!37;UBERON:0001004!4.30e-12!72;UBERON:0005911!5.16e-12!82;UBERON:0006554!7.65e-12!44;UBERON:0000062!5.13e-11!511;UBERON:0005178!5.99e-11!34;UBERON:0002224!5.99e-11!34;UBERON:0000065!9.92e-11!53;UBERON:0002553!1.24e-10!70;UBERON:0005181!2.09e-10!35;UBERON:0000160!1.40e-09!27;UBERON:0000058!1.57e-09!26;UBERON:0005157!2.66e-09!51;UBERON:0000481!3.12e-09!347;UBERON:0005409!3.39e-09!35;UBERON:0002048!3.94e-09!22;UBERON:0000117!3.94e-09!22;UBERON:0000171!3.94e-09!22;UBERON:0000170!3.94e-09!22;UBERON:0005597!3.94e-09!22;UBERON:0000118!3.94e-09!22;UBERON:0003886!7.73e-09!63;UBERON:0000922!1.03e-08!612;UBERON:0009569!1.99e-08!113;UBERON:0001048!2.04e-08!168;UBERON:0005156!2.68e-08!59;UBERON:0000990!2.68e-08!59;UBERON:0003104!4.66e-08!238;UBERON:0009142!4.66e-08!238;UBERON:0003064!5.12e-08!37;UBERON:0008947!1.23e-07!38;UBERON:0003258!1.23e-07!38;UBERON:0000468!1.31e-07!659;UBERON:0002113!1.36e-07!27;UBERON:0003918!1.36e-07!27;UBERON:0005095!1.36e-07!27;UBERON:0007687!1.36e-07!27;UBERON:0003101!1.54e-07!22;UBERON:0000079!1.54e-07!22;UBERON:0000064!1.56e-07!219;UBERON:0000161!2.30e-07!35;UBERON:0000489!2.33e-07!32;UBERON:0003135!3.29e-07!11;UBERON:0000063!4.68e-07!97;UBERON:0003133!4.68e-07!48;UBERON:0000072!6.15e-07!46;UBERON:0007196!6.20e-07!14;UBERON:0001558!6.20e-07!14;UBERON:0002108!6.23e-07!14;UBERON:0004802!6.72e-07!19;UBERON:0000115!6.72e-07!19;UBERON:0000467!7.99e-07!625;UBERON:0007023!8.20e-07!115;UBERON:0000080!8.49e-07!18;UBERON:0002120!8.49e-07!18;UBERON:0004875!8.49e-07!18;UBERON:0005721!8.49e-07!18;UBERON:0005754!8.49e-07!18;UBERON:0007297!8.49e-07!18;UBERON:0000480!9.70e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.33e-12;33!UBERON:0006554;2.77e-11;30!UBERON:0001008;2.77e-11;30!UBERON:0005178;1.99e-10;34!UBERON:0002224;1.99e-10;34!UBERON:0005409;1.28e-09;22!UBERON:0005181;2.43e-09;35!UBERON:0004211;7.91e-09;10!UBERON:0009773;7.91e-09;10!UBERON:0001231;7.91e-09;10!UBERON:0004810;7.91e-09;10!UBERON:0002048;1.41e-08;22!UBERON:0000117;1.41e-08;22!UBERON:0000171;1.41e-08;22!UBERON:0000170;1.41e-08;22!UBERON:0000160;5.72e-08;17!UBERON:0000489;2.89e-07;29!UBERON:0002113;3.42e-07;24!UBERON:0011143;3.42e-07;24!UBERON:0003101;6.02e-07;22!UBERON:0000079;6.02e-07;22!UBERON:0007196;6.84e-07;15!UBERON:0001558;6.84e-07;15!UBERON:0000065;8.29e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.85e-21,160;UBERON:0000925,1.85e-21,160;UBERON:0006595,1.85e-21,160;UBERON:0004921,1.82e-18,118;UBERON:0001007,3.54e-17,145;UBERON:0001555,3.54e-17,145;UBERON:0007026,3.54e-17,145;UBERON:0005177,6.53e-16,101;UBERON:0001008,1.35e-14,48;UBERON:0006554,8.27e-14,47;UBERON:0005178,1.37e-11,34;UBERON:0002224,1.37e-11,34;UBERON:0005153,1.57e-11,37;UBERON:0005181,4.47e-11,35;UBERON:0001004,3.82e-10,74;UBERON:0000065,6.68e-10,54;UBERON:0001041,1.49e-09,87;UBERON:0005157,2.47e-09,47;UBERON:0009569,4.58e-09,112;UBERON:0005911,7.61e-09,82;UBERON:0004810,7.80e-09,10;UBERON:0002113,1.32e-08,26;UBERON:0003918,1.32e-08,26;UBERON:0011143,1.32e-08,26;UBERON:0005095,1.32e-08,26;UBERON:0007687,1.32e-08,26;UBERON:0000489,1.34e-08,31;UBERON:0002048,1.38e-08,22;UBERON:0000117,1.38e-08,22;UBERON:0000171,1.38e-08,22;UBERON:0000170,1.38e-08,22;UBERON:0005597,1.38e-08,22;UBERON:0000118,1.38e-08,22;UBERON:0005409,4.76e-08,25;UBERON:0000160,5.19e-08,17;UBERON:0005156,5.59e-08,59;UBERON:0000990,5.59e-08,59;UBERON:0008947,1.55e-07,38;UBERON:0003258,1.55e-07,38;UBERON:0006555,1.60e-07,16;UBERON:0004819,1.60e-07,16;UBERON:0001046,4.65e-07,19;UBERON:0000915,5.60e-07,52;UBERON:0003101,6.33e-07,22;UBERON:0000079,6.33e-07,22;UBERON:0007196,6.40e-07,15;UBERON:0001558,6.40e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,12.532430761577,51.6372864299596,5.46103430325431,6.85794143393979,0,0,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,7.35536979583142,3.91567694411725,9.61360426433648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0.263504357079378,8.71010852059789,2.91436230634034,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54141078213801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.272746120590835,0.573609190778008,7.68434348616451,4.5060121229305,8.13357600086629,4.97573064073778,6.30802127189071,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,53.3769823277113,1.02940686179115,0.329250856225877,0,0.201057944823262,2.12953423864618,0,0,0,0.115930404975077,0,0,0,0,0,1.71697232418975,0,0,0,0,0.16798212819886,0,12.8068687465073,14.8223308642121,29.9038489748865,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,1.66435439510497,3.93107381328584,0,0,0,0,0,0,0,0,0,0,0,0,25.3804844142407,6.01519410909855,22.0073563556792,0,0,0,23.9135794840928,7.62451837333706,7.84349769176855,4.38417673959782,3.58875538235777,0,0,0,0,0.812839312631559,1.50506932156456,47.9167393324672,49.8645605357235,6.71624264166535,0,0,0,0,0,11.8497163394881,0,0,0.574265537996172,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,5.12383237619032,6.3422722230485,19.014294161693,4.6532579193553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86954887625624,10.7248364085726,16.3336477291984,12.8977007064187,6.45758059006845,1.68471475667626,8.86860307073351,3.21612760289743,0,0,0,0,0,0,0,0,2.88424992044177,3.84991942105343,4.90080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.42132431836989,0,0,0,0.284136146806413,6.20735660317994,0.593929361665277,1.84296421259539,0,0,0,0,14.9899039770875,3.98495976502139,8.28851746593443,0,0,0,0,0.269605053441981,52.8112465293047,0,5.52403071566828,0,0,0,0.0927680981618513,0,0,0.0874599999961957,13.7749919332611,20.8242010362464,110.091830576768,11.8193840883968,0.344743373241465,0,0,0,0,0,0,0,0.658156191461918,0,1.25481369850743,6.54077197282275,0,0.46112780877612,2.51321404347362,0.108647371922008,2.87101043758728,1.19076871422421,3.73124343213044,0,0,0,0,0,0,0,0,2.95397290339238,19.914402595416,7.6330658574328,0,52.7488823471608,10.6149077404007,17.1088440581415,0,0,0,0.741412462787447,0,0,0,51.8511240170038,10.1967759404319,15.3887917111262,9.67925728389311,0,0.189559738885464,0,0,0.664653872707185,0.330991955875499,0.627865836814451,9.55779438183671,13.9458677554598,0,13.8847790668105,37.3351034148779,0,7.68797340264933,0,0,0,0,23.9562870726396,0.353024506766001,3.61569185248852,0,0,0,37.741416867817,0,4.26905989478705,0,26.0803655048932,0,0,0,0,20.5053810116612,0,0,0,0,0,0,0,0,0,0,0,0,10.5829870264465,0,0,0.134366944973453,0,3.49487848582361,1.10296455230113,1.07140615895516,0.606631894687664,0.196854963029498,0,0,0.408610218334727,2.08979093004525,3.71356478812531,1.66176135211674,0,1.5476039091159,0,1.67717343799633,61.232034571477,21.0867444302692,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0,0,0.439656701034247,0,0.129282956361551,0.13223260174269,0,124.752258950051,70.2661174695431,5.65935498358797,21.5404308780542,0,0,0,0,0,0,0,0,19.4747079350291,0,0,0,6.30750115259078,3.88251680378983,1.17983165588629,0,0.37494122388632,0,0,0,59.0101981316671,53.1860175001728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0.308801447160972,0,0,0.578742114812744,4.39250345697989,0,0.345430341731199,0,0,0,0,0,0,0,2.53574548030352,0,0,0,0,0,1.95831310807222,7.46492712039567,0,0,0,0,0,0,0,0,0,0,18.4131272105658,0,0,0,0,0,0,0,0,0,0,5.88886311006154,9.31960814447149,0,6.23838597211826,0,0,0,1.72983755203292,0,7.81514011233093,0,0,80.7294230745067,0,0,0,0,0,2.74128883428591,0.992422356778588,0,16.6091155931474,0,0,1.21393120847326,4.55324382702595,0.709618961301111,0,0,0,0,6.50066124861825,0.111231401892069,7.14287144939678,0,40.3591915171856,1.82631744101899,0,0,3.28792103212619,0,25.5731135809876,0,0,0,0,7.60385627995501,13.7672754822489,0,0,5.92741870267301,24.2853280656693,0,0,64.8761504427195,21.2004504608925,22.9205698966667,0.647428837187895,0,0,0.971421986118279,54.7418344501327,0.198950775161368,0,14.3441524189479,0.109940516745429,3.92503393273351,12.4250394553791,1.96703604453562,103.469805199535,0.490296643507811,27.8098325579919,0,0,0,0,0,0,0,52.8519658272746,0,1.28386186702669,19.719082482656,3.21110498383179,0,0,0.0679914901909147,0,2.1161073620616,0,0,0,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| |||
|short_description=p2@SCNN1A | |||
}} |
Revision as of 11:39, 11 January 2014
Short description: | p2@SCNN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCNN1A_5end |
Coexpression cluster: | C3317_smallcell_lung_merkel_small_kidney_bronchioalveolar_Renal |
Association with transcript: | 0bp_to_ENST00000542260, ENST00000544882_5end |
EntrezGene: | SCNN1A |
HGNC: | 10599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.59e-20 | 253 |
endo-epithelial cell | 3.55e-18 | 42 |
endodermal cell | 5.17e-17 | 58 |
respiratory epithelial cell | 6.87e-12 | 13 |
kidney tubule cell | 7.80e-09 | 10 |
nephron tubule epithelial cell | 7.80e-09 | 10 |
epithelial cell of tracheobronchial tree | 2.38e-08 | 9 |
epithelial cell of lower respiratory tract | 2.38e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.55e-15 | 106 |
adenocarcinoma | 4.05e-10 | 25 |
cell type cancer | 6.30e-10 | 143 |