FFCP PHASE1:Hg19::chr12:124086704..124086715,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57696 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20085 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=14bp_to_ENST00000536079_5end | |||
|description=CAGE_peak_2_at_DDX55_5end | |||
|id=chr12:124086704..124086715,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002321;6.98e-08;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.04e-12!235;DOID:14566!2.85e-12!239;DOID:0050686!1.30e-09!137;DOID:0050687!2.16e-07!143;DOID:2531!4.62e-07!51;DOID:0060083!4.62e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.37e-15!94;UBERON:0001016!1.37e-15!94;UBERON:0001017!4.54e-14!82;UBERON:0005743!1.04e-13!86;UBERON:0002616!1.05e-12!59;UBERON:0000955!1.39e-12!69;UBERON:0006238!1.39e-12!69;UBERON:0001049!3.15e-12!57;UBERON:0005068!3.15e-12!57;UBERON:0006241!3.15e-12!57;UBERON:0007135!3.15e-12!57;UBERON:0003080!5.37e-12!42;UBERON:0002780!8.92e-12!41;UBERON:0001890!8.92e-12!41;UBERON:0006240!8.92e-12!41;UBERON:0001893!1.64e-10!34;UBERON:0002791!5.62e-10!33;UBERON:0001869!1.17e-09!32;UBERON:0002020!1.17e-09!34;UBERON:0003528!1.17e-09!34;UBERON:0002619!1.45e-09!22;UBERON:0001950!1.13e-08!20;UBERON:0000956!2.21e-08!25;UBERON:0000203!2.21e-08!25;UBERON:0003075!2.40e-08!86;UBERON:0007284!2.40e-08!86;UBERON:0002346!7.06e-08!90;UBERON:0003056!1.78e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.62e-11;34!UBERON:0002619;1.14e-10;22!UBERON:0001950;2.94e-10;20!UBERON:0002780;9.39e-10;41!UBERON:0001890;9.39e-10;41!UBERON:0002791;2.39e-09;32!UBERON:0000073;3.39e-09;53!UBERON:0002616;3.39e-09;53!UBERON:0001869;4.56e-09;32!UBERON:0000956;4.91e-09;25!UBERON:0000203;4.91e-09;25!UBERON:0003528;4.67e-08;34!UBERON:0002020;4.67e-08;34!UBERON:0000955;3.63e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.61e-16,89;UBERON:0000073,3.76e-15,53;UBERON:0002616,3.76e-15,53;UBERON:0001017,6.71e-15,81;UBERON:0002780,1.01e-14,41;UBERON:0001890,1.01e-14,41;UBERON:0003080,1.01e-14,41;UBERON:0006240,1.01e-14,41;UBERON:0001049,6.02e-14,56;UBERON:0005068,6.02e-14,56;UBERON:0006241,6.02e-14,56;UBERON:0007135,6.02e-14,56;UBERON:0000955,4.56e-13,68;UBERON:0006238,4.56e-13,68;UBERON:0001893,1.52e-12,34;UBERON:0002619,3.38e-11,22;UBERON:0001869,9.11e-11,32;UBERON:0001950,1.10e-10,20;UBERON:0002791,1.74e-10,32;UBERON:0003528,1.24e-09,34;UBERON:0002020,1.24e-09,34;UBERON:0000956,1.73e-09,25;UBERON:0000203,1.73e-09,25;UBERON:0003056,5.00e-09,61;UBERON:0010371,1.74e-08,104;UBERON:0003075,3.25e-08,82;UBERON:0007284,3.25e-08,82;UBERON:0004121,6.44e-08,171;UBERON:0000924,6.44e-08,171;UBERON:0006601,6.44e-08,171;UBERON:0002346,1.61e-07,86;UBERON:0000200,7.09e-07,6 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0,0.286235987131057,0.547497700291537,0,1.14620108621927,0.492603536699674,0.550975469195755,0.393364276848904,0.767658796194425,0.619264493264304,0,0,0.369754010166788,0.697204805222715,0.426507697462265,1.76160263600908,0,0.200544447470142,0.434021741431704,0.895661896959697,0.971680998056939,0.77272670290256,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0,0.645484683583826,0,0,0.545812300115692,0.224723484445085,0,0,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0,0.209658645508376,0.673971786878971,0,0.32145117339416,1.14005097496499,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0.560508562981536,1.31692042387539,1.180258620683,0.786021525498329,0.822405995998037,0.668745981562712,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0,0.270803863765016,0.640456598628376,0.260118695119756,0.493313713811028,0.552700035571697,0.289803085735052,0.444859689486181,0.535081656179426,1.04535523804977,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0.637130828648193,0,0.950452044448374,0,0,0,0,0,0.80642697289893,0.534880391567015,0.289648807765598,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0,0.458426764241994,0.728590576585084,0.370784442784429,2.59637914923747,0.870648686496336,0.930705723632056,1.66943437013739,0.571994910780128,0.371457501329565,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0,0.81014194788176,0.17859945656816,0,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0.379891534993739,1.98613771219828,1.43418310374407,0,0.560677600142307,0,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.448346041655403,0.117434498643765,0.161872944368132,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0,0,0,0.168336113954066,0,0,0,0.612975591598039,0.600952235626387,0.226864366320042,0.358779271377724,0.427114777637135,0,0.300091096084402,0.103052529238439,0.257640540045629,0,1.18143432568886,0.194874010322397,0,0,0,0,0.403008392910561,0,0,0.545492241181669,0.286804595389004,1.21973706129595,1.06023814657188,2.20768491452085,0.725627385107593,1.26160425437814,0.72995471815166,0,0,0,0,1.44375896333917,0.473227200159376,0.505754070234305,0,0.661763836394364,0.217879444092406,0.949082476444386,1.34831308160164,0.588664395376038,0,0.738155454624648,0,0.4115740113314,0,0,0,0.590789906681404,0.882926198829301,0.737930631258681,0.686271241194102,0.109750285408626,0,0.201057944823262,0.185176890317059,0,0,0,0.115930404975077,0.352226082707465,0,0,0.190254152234598,0,0,2.21595305478658,2.34004265139238,1.18904929830983,0,0.16798212819886,0,0.53735113621709,0.290633938513962,0,0.492663237895943,1.05658120815871,0.207328115540772,0.432359860250884,0.25248486685276,2.22242630022592,1.14596527667483,1.17217447210047,0,0.205654985406647,0.300343057843917,1.42913216315289,0.112131084345361,0,0.1466765716419,0,0,0,0.26593811658487,2.08014873822732,0,0,0,0,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0,1.74306691720059,0,2.43247561282381,0.502257091432126,0,0.718874566474748,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.672510863961164,0.394061520403854,0.862510299438069,0.641715181398742,0.508189248444927,0,0,0.837581326671744,2.55175500661265,0,0,0.828831026872071,0.24538298343828,0,0,0.415941723061614,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0.413536052245775,0,0.320182673410333,0,0,0,0.744323423456331,0.306923946576125,0.280660094433074,0.384417447767103,1.02341449813341,0.321707842287215,1.48418066444991,0,0.355123450626254,0.246381468041427,0,0.116210378459959,1.0877350463246,0,0.184161977871793,0.229628896329213,0.364182336013434,0.524497659837696,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0.522870902049801,0.769350375349168,0,0.325378394664303,0,0.366277859273374,1.15513299888823,0,0,0,0,0.462145851343933,0,0.137836572484531,0.214840489736547,0.290033387828457,0.0852266274161009,0.445160178233687,0.330569830721956,0.192190067365106,0.765676274967505,0.10115778085555,0,0.62962469366128,0,0,0,0.869932992075073,0.37064843820784,0.286249773483982,0.372158369359667,1.2655176988749,0.571890581771475,0,0,0,0,0,0.274537029736055,0.235624804691373,0.202182481573316,1.58510321173008,0.421258456238981,0,1.21856744815642,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0.86101074534246,0,0,0.459446800413919,0.507447609232169,0,0,0.238231775457789,0,0.648473311192717,0,0,0.534120355637366,0.962479855263359,0.245040215981032,2.60124445176006,1.44269212976445,0.924843963529383,0.637705090915289,0.399158742865633,0.383010740264733,2.11673582723883,0,0.842391534340376,2.28234679033192,0.783399478865116,0,0.846458889008016,0.963528450622197,1.00899853595524,2.12923118845163,1.03051603426729,0.921722292925374,0.447352215784832,0.500547425135725,0.586164286206121,0.556812347790485,0,0.540911356951966,1.33228787199128,5.63948020351398,0.18714054040822,0.73254089635947,0.242721043499027,0.557216921387392,0.568272293612826,0,0,0.307160702099232,1.9882952955326,0.844016498463076,0,1.15362711958732,0.844501632511974,0.19924798825107,0.552567831062295,0.503865495708552,0.102268682502155,0.984678443688556,0.311039587661807,0.179736702294654,0.716084698702437,0,0.493217028184668,0,1.11136990144637,1.93866549219044,1.11321717794222,0,1.04171104434093,1.39935999993913,0.724999575434793,0.341380344856499,1.01701460117107,1.18193840883968,1.03423011972439,1.74962768029953,0.694499979733169,0.885741385813839,0.60298219312704,4.5774520895125,0.663475559587348,1.77328571372128,2.4132393686937,0.871507708151921,0.139423744278603,0.230850775511391,0.683652335082007,0.46112780877612,0.718061155278177,0.108647371922008,0.31900115973192,0.183195186803725,0,1.02193298195737,0.784901281975124,0.498635045700469,0.225595660617181,0.588187602953219,0.671286347903371,0.569261198172555,0.317873157960757,1.05499032264014,0.326465616318295,0.989471500037586,0,0,0.0884575645033392,0,1.18608451472249,0.494255755786011,0.626531697032732,1.41542379259422,0.802577647298789,1.1713222286267,2.18945747058799,0,0.971121518136371,0.394584402849391,0,0.61214552326098,0.63186579628488,2.55549813004637,0.518440956986236,0.664653872707185,0.661983911750998,0,0,0.569219092059585,0.138674673013139,0.520679215005393,0.489961987071888,0.435296032902013,0.698906672968121,0.51595809741485,0.774050650312681,0.365446585430928,0.821154570532092,0.290967049465258,0.706049013532002,0,0.137041924646751,0,1.83601308272048,0.586654148204409,0.480952921509202,0,0.599428828746391,0.432271251462318,0.343609788497747,0.514784993585894,0.14405479798815,0.248505071130865,0.235694034616795,0.135904206073614,0.627617077873999,0.203996435272644,0.577901179803038,0,0.547621515567972,0,1.71906176567983,0.525774708558629,0.837847203816763,0.229160424011684,0,0.998395002494955,0,0.223171457441873,0.134366944973453,0.360299883542404,0,0.472699093843342,0.247247575143499,0.202210631562555,0.885847333632739,0.508039992394707,1.59045937961861,0.953423842781029,1.28602518772015,1.2378549293751,1.24632101408756,1.5748172408605,0,2.24773359634691,0.335434687599266,0.0788057072991982,0.314727528809989,0.211200673038813,0.35857467866569,0.191915197319445,0.714695326373367,0,0.5085370753095,0,0,0,2.39460383124975,0.410462603746695,0.681552087141687,0.566560457600628,0.146552233678082,0,0.775697738169303,0.39669780522807,0.342173675768659,0,0.320362237703084,0.157204305099666,0,0.496166021811951,0.592834895693833,0.974340787047167,1.27668251554036,0,1.7548292581589,1.22538230705385,0.327872630709804,0.942324577501406,1.77213635993397,1.46431517882356,1.1267183763585,0.573409195690071,0.665574309221114,1.17983165588629,0.968440444553616,0.249960815924213,2.27473676312472,0.856396000634902,0,2.34167452903441,1.59413131471908,0.298509605773748,0.233713309847224,0,0.378806010550178,1.0062716070103,0,0.228840068396924,0.151230923763239,0.621748802331122,0.295710299979268,0.63718706865481,0.449803112163605,0,0,0,1.04349012362347,0.150257608997218,0.761610424337591,0,0,0,0.928067519756987,0,0.400027764663154,0.343395705182793,0,3.78554694685953,0.385239660814607,1.50109113962448,1.30497145982606,0.453411851024545,0.231522474323834,0,0.358177682162975,0,0.877136198314828,0.176689145945881,0.578742114812744,0,0.512483037175893,0.690860683462397,0,0.829550616910385,0.194860308839388,0.132864840313363,0.163565394255844,0,0.245772908753719,0.633936370075881,0.59996218756479,0.106691729694141,0.172214979660816,1.13503190713367,1.47284760201473,0,0.622077260032973,2.42999305476938,1.07824811396682,1.10086159299127,0.873677105536111,0.509197589862076,0,0.371807292777007,1.11728983594649,0.318004350653419,1.81382013502883,2.40171224485641,0,0,2.18379365327962,1.41696576325585,0.638535436228605,1.02558182120378,0.756215088665154,1.59061680667701,1.77623210195036,0,0.687034029507179,0.589848616738702,0.183428598521679,0.115525666150338,0,0,1.5913297769302,0.225630985047772,0.20170506870352,0.781514011233092,0.523813388962845,0.163771917510097,0.443568258651136,1.75597720007826,0.781078098613847,0.826747186004736,1.39514782426595,1.09394961803644,0.548257766857182,0,0.175871244359621,0.127762427639595,1.60710550763486,1.00885116665647,0.606965604236632,0.682986574053893,0,0.230467975111559,0.342976018874837,1.35939465953663,1.11813715056843,0.118193840883968,0.222462803784138,0,1.57115589916002,0.560544326627578,0.913158720509496,0.431855182437243,1.43325506366115,0.500335809236594,0.632054446930906,0.697448552208751,0.347716544605159,0,0,0.3414369541879,0.691259661814092,0.430227358820278,0.828324005113957,0.937347452350735,0,0.9164274741762,0,0,0.335566295393377,0.392600934460972,0.365753774946808,0,0.205325613712494,0,0.485710993059139,0.701818390386317,0.397901550322736,0.356760272332706,1.58124514854544,0.989464650708862,1.50962843566674,0.308696632431779,0,2.82190377816914,0,0,0.588925401344836,0.891139200981258,0,0.339854229375634,0.0939839179798536,0.0644578879735772,0.89947040332436,0.535661815816973,0.705789743431384,0.962896400270019,0.730336388246517,0.458729283404541,1.00337708206016,0.788857810965923,1.63179576458195,1.30905207102113,0,0.371995018166751,0,0,0.126166424835079,0.546327859818478,0.506794004045748,0.509944148709909,1.3360870263278,2.02168778976659,2.005660314339,0.530450887527676,0.803892390468535,0,1.13776295448085,0,0.23806443146374,0.129177819672012,0.682821857254437,0,0.12729431655633,0,0,0,0.202056159043763,0.143444410785353,0.332660356546013,0.651226148887796,0.106727345877715,0,0.449126010532934,0,0.244482888365733,0,0,0,0.961705476909699 | |||
|short_description=p2@DDX55 | |||
}} |
Revision as of 16:34, 11 January 2014
Short description: | p2@DDX55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DDX55_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000536079_5end |
EntrezGene: | DDX55 |
HGNC: | 20085 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.61e-16 | 89 |
regional part of nervous system | 3.76e-15 | 53 |
regional part of brain | 3.76e-15 | 53 |
central nervous system | 6.71e-15 | 81 |
regional part of forebrain | 1.01e-14 | 41 |
forebrain | 1.01e-14 | 41 |
anterior neural tube | 1.01e-14 | 41 |
future forebrain | 1.01e-14 | 41 |
neural tube | 6.02e-14 | 56 |
neural rod | 6.02e-14 | 56 |
future spinal cord | 6.02e-14 | 56 |
neural keel | 6.02e-14 | 56 |
brain | 4.56e-13 | 68 |
future brain | 4.56e-13 | 68 |
telencephalon | 1.52e-12 | 34 |
regional part of cerebral cortex | 3.38e-11 | 22 |
cerebral hemisphere | 9.11e-11 | 32 |
neocortex | 1.10e-10 | 20 |
regional part of telencephalon | 1.74e-10 | 32 |
brain grey matter | 1.24e-09 | 34 |
gray matter | 1.24e-09 | 34 |
cerebral cortex | 1.73e-09 | 25 |
pallium | 1.73e-09 | 25 |
pre-chordal neural plate | 5.00e-09 | 61 |
ecto-epithelium | 1.74e-08 | 104 |
neural plate | 3.25e-08 | 82 |
presumptive neural plate | 3.25e-08 | 82 |
ectoderm-derived structure | 6.44e-08 | 171 |
ectoderm | 6.44e-08 | 171 |
presumptive ectoderm | 6.44e-08 | 171 |
neurectoderm | 1.61e-07 | 86 |
gyrus | 7.09e-07 | 6 |