FFCP PHASE1:Hg19::chr13:46559452..46559474,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1383 | |||
|description=CAGE_peak_at_chr13:46559452..46559474,- | |||
|id=chr13:46559452..46559474,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.59e-11!235;DOID:14566!7.86e-11!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.27e-09!41;UBERON:0001890!3.27e-09!41;UBERON:0006240!3.27e-09!41;UBERON:0001049!8.56e-09!57;UBERON:0005068!8.56e-09!57;UBERON:0006241!8.56e-09!57;UBERON:0007135!8.56e-09!57;UBERON:0003080!1.46e-08!42;UBERON:0000955!2.24e-08!69;UBERON:0006238!2.24e-08!69;UBERON:0000073!2.32e-08!94;UBERON:0001016!2.32e-08!94;UBERON:0005743!3.71e-08!86;UBERON:0001017!6.57e-08!82;UBERON:0002020!6.66e-08!34;UBERON:0003528!6.66e-08!34;UBERON:0002616!9.68e-08!59;UBERON:0002791!1.12e-07!33;UBERON:0001893!1.24e-07!34;UBERON:0001869!6.32e-07!32;UBERON:0002346!6.98e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.59e-08;34!UBERON:0002020;1.59e-08;34!UBERON:0001893;1.87e-08;34!UBERON:0002791;2.21e-08;32!UBERON:0002780;6.90e-08;41!UBERON:0001890;6.90e-08;41!UBERON:0000073;1.50e-07;53!UBERON:0002616;1.50e-07;53!UBERON:0001869;1.74e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.04e-12,56;UBERON:0005068,1.04e-12,56;UBERON:0006241,1.04e-12,56;UBERON:0007135,1.04e-12,56;UBERON:0000073,3.60e-12,53;UBERON:0002616,3.60e-12,53;UBERON:0002780,1.16e-11,41;UBERON:0001890,1.16e-11,41;UBERON:0003080,1.16e-11,41;UBERON:0006240,1.16e-11,41;UBERON:0002346,1.06e-10,86;UBERON:0000955,1.54e-10,68;UBERON:0006238,1.54e-10,68;UBERON:0001017,5.35e-10,81;UBERON:0003528,1.35e-09,34;UBERON:0002020,1.35e-09,34;UBERON:0002791,2.04e-09,32;UBERON:0001893,2.30e-09,34;UBERON:0003075,2.85e-09,82;UBERON:0007284,2.85e-09,82;UBERON:0001016,2.90e-09,89;UBERON:0001869,2.53e-08,32;UBERON:0010371,2.69e-08,104;UBERON:0004121,8.93e-08,171;UBERON:0000924,8.93e-08,171;UBERON:0006601,8.93e-08,171;UBERON:0003056,1.39e-07,61 | |||
|phase1_expression=0,1.07050261945492,0.281908808191942,1.0007329835313,2.23480547213644,0.872338524100369,0,1.26343974685366,0.783556884599516,0,0,0,0,0.37129905888014,1.98838425436749,0.672325146451775,1.80808358407193,0,0.487932798790507,0.123121058076788,0,0.313454721478088,1.14494394852423,1.36874425072884,1.00434111675842,1.06978768047132,1.23150884174919,0.708397031823113,0,0,0,0,0,0,1.08454080812422,0.426507697462265,0,0,0.401088894940283,0,0.223915474239924,0,0,1.01778767145695,1.51150377475524,0.485168122375632,0.697287110717054,0.411167888021826,1.54853185447552,0.28769239232215,0.256160706529101,0,0.689491361473237,0,0,1.88242339542605,0.272906150057846,0,2.75475503133812,0.320929027076094,1.27867425159808,0.329851300186716,0.598390972864896,0,0.870627715885752,0,0,2.00998932205395,0.521482918420201,0,0,0,0,0,0.425208599930087,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0.393419540227666,1.17903228824749,0.822405995998037,0.167186495390678,0,0,0,0.334231370655521,0.294605907474837,0.443067789167242,0,0.640456598628376,1.04047478047903,0.986627427622057,1.65810010671509,0,0.296573126324121,0,0,0.226618685395132,0.383220493601921,0.34362744548263,0,0,0,0,0.150575119077773,0.511946444617674,0,0,0,0.80642697289893,1.06976078313403,1.15859523106239,0,0,0.12786256184353,0.722878304769133,0,1.15877215168659,0.795285947051099,0.486634870302636,0.283604451492204,0.665188192387692,1.49319135678314,0.0654895377488563,0,0.370784442784429,0,0.174129737299267,0.664789802594326,0,0,0,0,0,0,0,0.838998872419812,0.550236083880135,0.208994966536811,0,0.35576626268671,0,0,0.760272105718513,0.732186172644509,0.735326160691737,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0.993943903390637,0.759783069987479,0.397227542439656,2.86836620748814,1.41867352879343,0,0,0.98667019366864,0,0.67355336034844,0.490385709340376,0,0.576175924479999,0,0.624320153660641,0.570471821544449,1.49448680551801,0.939475989150119,0.323745888736263,0.280901613404497,0,1.47401180774122,0.516628905878827,0,0.989067717114227,0,0,0.505008341862199,0.125118519871964,0,0.877955241761676,0.30648779579902,0,0.340296549480063,5.02290979928813,1.70845911054854,0.423863802319124,2.70081986475962,0.618315175430633,3.34932702059318,0.18611685633159,1.85653965465393,0.389748020644795,3.78650661366172,0.0920498986422993,0.484938170456436,3.55009592516614,0.503760491138201,0.508681776931463,0,0.545492241181669,0,1.58565817968474,0.662648841607426,1.51052125730374,1.65857688024593,1.26160425437814,0.36497735907583,0,0.643240938192885,0,1.85747171212792,0,0.473227200159376,0,0,1.54411561825352,0,0.474541238222193,0.674156540800822,0,0,0,0,0,0,3.80265104465493,0,7.08947888017685,0,0.737930631258681,1.02940686179115,0.109750285408626,0,1.40740561376283,0.555530670951178,0,0,0,0.115930404975077,0.234817388471643,0,0,0.380508304469197,0,0,0,0.234004265139238,0.148631162288728,0,0.671928512795438,0.283550194484773,1.16426079513703,1.16253575405585,0.383382679165211,0,0.352193736052904,0.414656231081544,0.144119953416961,0.12624243342638,1.39695367442772,0,0,0,3.59896224461632,2.40274446275134,0.285826432630578,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0.845302752556,1.32969058292435,0,0,0,0,1.00084595560703,0.542621605391443,0,0.325736184293735,0.355391948742546,1.58390374586686,0.602878754119172,0,1.89948683245908,0,1.00451418286425,4.21667878966063,1.4377491329495,0,0,0.579125226670317,1.43833425785268,0.358121926479791,1.90544744788996,0.394061520403854,0.215627574859517,1.15508732651774,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0.736148950314839,0,1.35632511849868,0.831883446123229,0.892144943985809,0.788512075169673,1.28855556491985,0,0,0,0,0.184369168541703,1.21637060255316,0,0,0.620304078368662,0.215714200818617,0,0,0,0.30239029332968,0,1.53461973288062,1.12264037773229,0,0.511707249066704,1.60853921143608,0,0.308419387605311,0.710246901252508,0.492762936082855,0.519254429183621,1.74315567689939,1.57117284469109,1.00253235151642,3.31491560169227,0.229628896329213,1.63882051206045,1.18011973463482,0,0.539107359730903,0,0,0.844413031143006,0,0.170093705276516,1.0795795805107,0,0.270946437543853,0,0.254876273045038,0,0,0.438519753291869,0.261435451024901,2.05160100093111,0.656029291399411,0.325378394664303,0.515205058238611,0.732555718546747,0.165018999841176,0,0,0,0.48335359146061,0.154048617114644,1.07452572308291,0.827019434907183,0.644521469209642,0.580066775656914,0.596586391912706,0.623224249527161,0.165284915360978,0.576570202095319,0.638063562472921,1.11273558941105,0,1.88887408098384,0,0,0,0,0,0,0,0.632758849437452,0.762520775695299,0.255897791311334,0.855877976067841,0,0,0.359744915166629,0.823611089208164,0.235624804691373,0,0,0,0,0.487426979262569,0,0.409499734223957,2.12108147930569,0,0,0,0,0,0,0,0,0,1.00387946542836,0.491245205065606,0,0.35476106407059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| |||
|short_description=p@chr13:46559452..46559474,- | |||
}} |
Revision as of 17:37, 11 January 2014
Short description: | p@chr13:46559452..46559474, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr13:46559452..46559474, - |
Coexpression cluster: | C1383_neuroectodermal_neuroblastoma_Hepatocyte_testicular_amygdala_Monocytederived_olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.04e-12 | 56 |
neural rod | 1.04e-12 | 56 |
future spinal cord | 1.04e-12 | 56 |
neural keel | 1.04e-12 | 56 |
regional part of nervous system | 3.60e-12 | 53 |
regional part of brain | 3.60e-12 | 53 |
regional part of forebrain | 1.16e-11 | 41 |
forebrain | 1.16e-11 | 41 |
anterior neural tube | 1.16e-11 | 41 |
future forebrain | 1.16e-11 | 41 |
neurectoderm | 1.06e-10 | 86 |
brain | 1.54e-10 | 68 |
future brain | 1.54e-10 | 68 |
central nervous system | 5.35e-10 | 81 |
brain grey matter | 1.35e-09 | 34 |
gray matter | 1.35e-09 | 34 |
regional part of telencephalon | 2.04e-09 | 32 |
telencephalon | 2.30e-09 | 34 |
neural plate | 2.85e-09 | 82 |
presumptive neural plate | 2.85e-09 | 82 |
nervous system | 2.90e-09 | 89 |
cerebral hemisphere | 2.53e-08 | 32 |
ecto-epithelium | 2.69e-08 | 104 |
ectoderm-derived structure | 8.93e-08 | 171 |
ectoderm | 8.93e-08 | 171 |
presumptive ectoderm | 8.93e-08 | 171 |
pre-chordal neural plate | 1.39e-07 | 61 |