FFCP PHASE1:Hg19::chr13:78472028..78472037,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:78472028..78472037,- | |||
|id=chr13:78472028..78472037,- | |||
|ontology_enrichment_celltype=CL:0002541!4.35e-09!3;CL:0002617!4.97e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.71e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.83e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.81e-40;1!UBERON:0006241;1.71e-14;3!UBERON:0003057;1.71e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.39e-23!86;UBERON:0001049!3.53e-23!57;UBERON:0005068!3.53e-23!57;UBERON:0006241!3.53e-23!57;UBERON:0007135!3.53e-23!57;UBERON:0001017!5.17e-23!82;UBERON:0007023!1.34e-22!115;UBERON:0000073!2.23e-20!94;UBERON:0001016!2.23e-20!94;UBERON:0002616!3.43e-18!59;UBERON:0003075!2.46e-17!86;UBERON:0007284!2.46e-17!86;UBERON:0002346!3.02e-16!90;UBERON:0000955!7.39e-16!69;UBERON:0006238!7.39e-16!69;UBERON:0003076!1.51e-13!15;UBERON:0003057!1.51e-13!15;UBERON:0002780!7.13e-13!41;UBERON:0001890!7.13e-13!41;UBERON:0006240!7.13e-13!41;UBERON:0003080!1.76e-12!42;UBERON:0002020!1.84e-12!34;UBERON:0003528!1.84e-12!34;UBERON:0001893!4.62e-12!34;UBERON:0002298!7.82e-12!8;UBERON:0002308!1.66e-11!9;UBERON:0000125!1.66e-11!9;UBERON:0002420!2.14e-11!9;UBERON:0007245!2.14e-11!9;UBERON:0010009!2.14e-11!9;UBERON:0010011!2.14e-11!9;UBERON:0000454!2.14e-11!9;UBERON:0001869!3.30e-11!32;UBERON:0002791!8.74e-11!33;UBERON:0004733!2.17e-10!12;UBERON:0002028!2.17e-10!12;UBERON:0007277!2.17e-10!12;UBERON:0000033!6.67e-10!123;UBERON:0005383!9.47e-10!3;UBERON:0005382!9.47e-10!3;UBERON:0004121!1.54e-09!169;UBERON:0004732!1.65e-09!13;UBERON:0000153!3.87e-09!129;UBERON:0007811!3.87e-09!129;UBERON:0000924!3.87e-09!173;UBERON:0006601!3.87e-09!173;UBERON:0000988!4.23e-09!3;UBERON:0000476!4.35e-09!3;UBERON:0000920!4.35e-09!3;UBERON:0002771!6.05e-09!3;UBERON:0003056!1.15e-08!61;UBERON:0001896!1.29e-08!3;UBERON:0005290!1.29e-08!3;UBERON:0010096!1.29e-08!3;UBERON:0001871!1.34e-08!7;UBERON:0000369!2.18e-07!4;UBERON:0002435!2.18e-07!4;UBERON:0000204!2.18e-07!4;UBERON:0010082!2.18e-07!4;UBERON:0000200!2.42e-07!6;UBERON:0001873!3.93e-07!2;UBERON:0010122!3.93e-07!2;UBERON:0009663!4.31e-07!7;UBERON:0002148!6.82e-07!2;UBERON:0009662!6.82e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.81e-40;1!UBERON:0002082;1.81e-40;1!UBERON:0002771;3.11e-21;2!UBERON:0001896;1.71e-14;3!UBERON:0002240;1.71e-14;3!UBERON:0004151;1.71e-14;3!UBERON:0005174;1.71e-14;3!UBERON:0005290;1.71e-14;3!UBERON:0001137;1.71e-14;3!UBERON:0000200;5.54e-08;6!UBERON:0002298;6.55e-08;6!UBERON:0001871;5.08e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,9.91e-41,1;UBERON:0002082,9.91e-41,1;UBERON:0010226,9.91e-41,1;UBERON:0002771,3.11e-21,2;UBERON:0004151,1.40e-14,3;UBERON:0002240,1.60e-14,3;UBERON:0005174,1.60e-14,3;UBERON:0001137,1.60e-14,3;UBERON:0001896,2.09e-14,3;UBERON:0005290,2.09e-14,3;UBERON:0010096,2.09e-14,3;UBERON:0003076,1.50e-11,15;UBERON:0003057,1.50e-11,15;UBERON:0000200,5.54e-08,6;UBERON:0002298,7.25e-08,6;UBERON:0001049,4.78e-07,56;UBERON:0005068,4.78e-07,56;UBERON:0006241,4.78e-07,56;UBERON:0007135,4.78e-07,56;UBERON:0001871,5.08e-07,6 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0.719792448923265,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0,0,0.157611414598396,0,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,2.3184990331373,0.1251909307065,1.14681839138014,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.6124909547064,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0,0.135939465953663,0,0,0,0,0.314231179832004,0,0,0,0,0.285906176706625,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0.126698501011437,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:78472028..78472037,- | |||
}} |
Revision as of 18:09, 11 January 2014
Short description: | p@chr13:78472028..78472037, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:78472028..78472037, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.83e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 9.91e-41 | 1 |
cardiac ventricle | 9.91e-41 | 1 |
future cardiac ventricle | 9.91e-41 | 1 |
middle temporal gyrus | 3.11e-21 | 2 |
cardiac chamber | 1.40e-14 | 3 |
spinal cord | 1.60e-14 | 3 |
dorsal region element | 1.60e-14 | 3 |
dorsum | 1.60e-14 | 3 |
medulla oblongata | 2.09e-14 | 3 |
myelencephalon | 2.09e-14 | 3 |
future myelencephalon | 2.09e-14 | 3 |
posterior neural tube | 1.50e-11 | 15 |
chordal neural plate | 1.50e-11 | 15 |
gyrus | 5.54e-08 | 6 |
brainstem | 7.25e-08 | 6 |
neural tube | 4.78e-07 | 56 |
neural rod | 4.78e-07 | 56 |
future spinal cord | 4.78e-07 | 56 |
neural keel | 4.78e-07 | 56 |
temporal lobe | 5.08e-07 | 6 |