FFCP PHASE1:Hg19::chr13:103451282..103451303,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79070 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19350 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_ENST00000460338_5end | |||
|description=CAGE_peak_2_at_KDELC1_5end | |||
|id=chr13:103451282..103451303,- | |||
|ontology_enrichment_celltype=CL:0000055!4.74e-29!180;CL:0000393!7.19e-14!60;CL:0000211!7.19e-14!60;CL:0000680!1.57e-13!57;CL:0000056!1.57e-13!57;CL:0000355!1.57e-13!57;CL:0000012!6.58e-13!682;CL:0000548!1.33e-12!679;CL:0000004!1.33e-12!679;CL:0000255!1.33e-12!679;CL:0000187!2.19e-12!54;CL:0000183!9.29e-12!59;CL:0002321!1.97e-11!248;CL:0000220!3.61e-11!246;CL:0000359!5.45e-11!32;CL:0000144!1.11e-10!625;CL:0000192!1.96e-10!42;CL:0000514!1.96e-10!42;CL:0000222!2.08e-10!119;CL:0000057!1.13e-09!75;CL:0000003!2.53e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.49e-12;32!CL:0000393;6.00e-08;61!CL:0000211;6.00e-08;61!CL:0000192;6.54e-08;43!CL:0000187;7.74e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.88e-15,61;CL:0000211,1.88e-15,61;CL:0000680,4.86e-15,58;CL:0000056,4.86e-15,58;CL:0000355,4.86e-15,58;CL:0000187,1.05e-13,55;CL:0000359,4.52e-13,32;CL:0000192,4.17e-11,43;CL:0000514,4.17e-11,43;CL:0000222,2.67e-10,121;CL:0000034,3.05e-10,441;CL:0000048,1.64e-09,427;CL:0000723,3.93e-09,433;CL:0000057,6.62e-09,76;CL:0002321,1.38e-08,250;CL:0002494,9.48e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;6.54e-08;43!CL:0000355;6.90e-08;58 | |||
|ontology_enrichment_disease=DOID:14566!5.25e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.83e-11!143;UBERON:0001134!3.04e-11!61;UBERON:0002036!3.04e-11!61;UBERON:0003082!3.04e-11!61;UBERON:0004290!3.63e-11!70;UBERON:0000914!1.74e-10!83;UBERON:0002329!1.74e-10!83;UBERON:0003077!1.74e-10!83;UBERON:0003059!1.74e-10!83;UBERON:0007282!1.74e-10!83;UBERON:0009618!1.74e-10!83;UBERON:0007285!1.74e-10!83;UBERON:0002385!1.97e-10!63;UBERON:0001015!1.97e-10!63;UBERON:0000383!1.97e-10!63;UBERON:0000486!1.04e-09!82;UBERON:0003914!1.80e-09!118;UBERON:0002100!2.94e-09!216;UBERON:0001637!2.38e-08!42;UBERON:0003509!2.38e-08!42;UBERON:0004572!2.38e-08!42;UBERON:0003104!3.96e-08!238;UBERON:0009142!3.96e-08!238;UBERON:0000490!6.30e-08!138;UBERON:0002049!7.03e-07!79;UBERON:0007798!7.03e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.00e-07;33!UBERON:0004571;7.00e-07;33!UBERON:0001637;9.34e-07;42!UBERON:0003509;9.34e-07;42!UBERON:0004572;9.34e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,5.60e-14,160;UBERON:0009142,5.60e-14,160;UBERON:0001134,8.11e-13,62;UBERON:0002036,8.11e-13,62;UBERON:0003082,8.11e-13,62;UBERON:0002329,2.09e-12,71;UBERON:0003059,2.09e-12,71;UBERON:0007282,2.09e-12,71;UBERON:0004290,2.09e-12,71;UBERON:0009618,2.09e-12,71;UBERON:0007524,3.33e-12,73;UBERON:0003077,5.87e-12,72;UBERON:0007285,5.87e-12,72;UBERON:0007503,5.91e-12,78;UBERON:0002385,7.79e-12,64;UBERON:0001015,7.79e-12,64;UBERON:0000383,7.79e-12,64;UBERON:0005256,3.65e-10,122;UBERON:0000486,6.17e-10,83;UBERON:0002100,6.63e-10,199;UBERON:0003914,1.38e-09,117;UBERON:0001637,2.03e-09,42;UBERON:0003509,2.03e-09,42;UBERON:0004572,2.03e-09,42;UBERON:0000490,8.97e-08,148;UBERON:0004573,2.01e-07,33;UBERON:0004571,2.01e-07,33 | |||
|phase1_expression=2.54349730978779,2.14100523890983,3.38290569830331,0,2.23480547213644,6.10636966870258,0,1.89515962028049,2.61185628199839,2.45733936501509,0.697801167972428,2.62129646556207,1.58260186937072,0.990130823680373,0.994192127183747,2.6893005858071,2.41077811209591,2.19093027116212,1.46379839637152,1.84681587115182,1.22400414746552,0.313454721478088,2.0036519099174,6.70684682857133,2.25976751270645,0.534893840235659,0.738905305049512,0.550975469195755,0.393364276848904,0,0.154816123316076,0,0,0,0,0.284338464974843,1.17440175733939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,0.560508562981536,1.58030450865046,0,0,0,0,0,0,0,1.44833593950726,0,0,0,0.896639238079726,0.910415432919148,0.986627427622057,1.10540007114339,0.579606171470105,0,0,0,0.453237370790265,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,4.69490601792545,4.98663991189768,0.722878304769133,3.50936537445123,2.462390822334,2.3858578411533,1.94653948121054,1.79616152611729,2.4390233720882,3.51339142772504,0.785874452986276,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0.56530794192401,0,2.20094433552054,0.626984899610432,1.8089173141853,0.71153252537342,1.67360306382335,0.805658634218294,2.28081631715554,0.488124115096339,1.10298924103761,0.81014194788176,0.892997282840798,0.44905874525234,0.675668882899933,0,0,0.916008719652036,0,0,0.436094052142534,0.993943903390637,5.44511200157693,2.1185468930115,12.0471380714502,6.02936249737207,2.80338800071154,1.06748995729705,1.72667283892012,4.66816553099649,2.42479209725439,3.59616186849609,0.302714855289863,2.88087962239999,0.70296429550139,0.936480230490962,0.570471821544449,1.34503812496621,1.29177948508141,1.61872944368132,1.12360645361799,0.816616685019573,0.491337269247072,0.309977343527296,0,0.494533858557114,0.910161361938026,0.718618141816238,1.0100166837244,0.625592599359821,1.6623846929051,1.31693286264251,1.22595118319608,0.751190294532984,6.57906662328122,2.33206526395521,1.70845911054854,1.69545520927649,3.90118424909723,0.92747276314595,1.28820270022815,1.11670113798954,8.43881661206331,2.92311015483596,3.02920529092937,1.28869858099219,0.969876340912871,4.26011511019937,1.81353776809752,1.86516651541536,0.773043412653187,0.545492241181669,0.860413786167011,1.34171076742555,2.12047629314376,3.60201222895507,2.28054321033815,5.80337957013945,1.82488679537915,4.69348596989448,2.57296375277154,0,0.928735856063958,1.44375896333917,1.8929088006375,1.68584690078102,1.44606617930089,1.32352767278873,3.4860711054785,1.42362371466658,2.02246962240247,1.56977172100277,1.53898862778556,0,0,4.115740113314,2.94017422771084,1.26755034821831,0.982827216677626,0.590789906681404,0.882926198829301,1.22988438543114,8.57839051492628,0.329250856225877,0,1.20634766893957,0.833296006426766,0.325808305310325,0,4.3299402607582,2.78232971940184,7.27933904262094,1.44366447761074,1.85194205030644,1.90254152234598,0,0.858486162094873,0,0,0,0.93733833986777,0.671928512795438,0.992425680696705,0.716468181622786,0.581267877027924,0.766765358330422,7.38994856843915,1.58487181223807,0.414656231081544,0.144119953416961,0,0.317489471460845,0.763976851116555,0,0,0.822619941626588,1.20137223137567,1.71495859578347,1.90622843387113,0.87192013766656,2.6401782895542,7.10994436667778,0,5.071816515336,3.19125739901845,2.08014873822732,0.514414748524284,0,0,3.43147184779554,1.62786481617433,1.64648067356154,2.93162565864362,1.42156779497018,5.543663110534,10.2489388200259,6.97226766880235,12.6965698801212,0,0,2.10833939483032,1.67737398844108,1.14861935834114,7.13184525203592,3.90909528002464,4.9314317412092,2.14873155887875,1.00876629594175,0,0,0.128343036279748,0.76228387266739,0,1.54657762555539,1.00509759200609,1.91381625495949,0,0,0,1.59498939234882,1.00034104211935,0.542530047399471,1.03985430765404,1.96271887676878,0.946214490203608,0.468565659970853,0.601892199455438,2.27407504055985,0,1.32845119707087,1.47495334833363,1.82455590382974,0.195801157462741,0.686286847621712,0,0.215714200818617,0,1.21251028578504,0,1.81434175997808,3.96972492510043,3.6830873589135,3.64858122762996,3.07533958213682,1.53512174720011,5.46903331888265,0,7.24785560872481,10.6537035187876,8.1305884453671,2.07701771673448,9.87788216909654,2.05461064305758,0,0.460404944679482,1.83703117063371,1.45672934405374,1.18011973463482,0.451199612907412,2.0794141018192,2.35304930753057,4.38417673959782,2.84989398010764,1.13733384070897,0.340187410553031,2.59099099322567,0,3.79325012561394,1.50506932156456,3.82314409567557,1.66215201785745,4.47749509444357,0,0,16.1563578823325,6.88830755969382,2.60302715731442,0.515205058238611,2.83865340936865,3.96045599618822,0.574265537996172,0.650060246036521,3.21367859688319,1.25671933779759,1.69453478826109,2.91656981979646,1.65403886981437,3.11518710117994,1.30515024522806,2.38634556765083,1.4245125703478,0.165284915360978,0.384380134730212,0.893288987462089,0.30347334256665,1.39453664789186,10.3888074454111,1.3940745403212,1.84820148105653,3.19383618190213,4.34966496037536,4.26245703939016,4.43687148900173,1.86079184679834,1.58189712359363,3.62197368455267,0.255897791311334,0.855877976067841,4.45484547096312,1.56989728039846,2.69808686374972,1.09814811894422,3.41655966802491,4.24583211303964,4.75530963519025,3.79132610615083,0.48763373908959,5.84912375115083,0,1.36499911407986,0.848432591722276,2.26016233240486,6.06501877900737,3.3171948762061,3.94605796728386,1.15755106853338,1.31178950409327,4.05820753925408,5.5768229657955,3.3803472303869,1.43411352204052,3.83171259951173,4.63672366925625,1.77380532035299,2.9555068941673,0.658589785919804,1.13841952129715,0.699869440489966,0.0962221127255121,0,0,1.12972560932135,0.43050537267123,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,3.09789806269672,1.92495971052672,0.735120647943095,0,0,0,2.39139409093234,0,20.4910746041632,2.32840940996271,2.27235358192189,10.6702927683114,0.684704037099577,0.783399478865116,2.50634477090067,5.2480451118497,0.481764225311099,0,0,0,0,0,0.500547425135725,0,0.556812347790485,1.23087398947712,1.6227340708559,2.66457574398256,2.81974010175699,0,0.146508179271894,0.606802608747567,3.67763168115679,1.42068073403207,2.86493381685228,1.48482340416319,0.614321404198464,0.994147647766298,0.140669416410513,0.890469640183247,2.14245036494787,2.95575571379191,0.398495976502139,0,1.76352923497993,1.1249555075237,0.738508832766417,0.622079175323615,0.539210106883961,0,1.02314474045374,0.394573622547734,0,0,0,0.371072392647405,0,0,0.262379999988587,0,0.227586896570999,0.254253650292766,0.472775363535873,1.72371686620732,0.583209226766509,1.21537496453305,0,0.723578631752448,0,0.552896299656123,0,0.438770794307945,0.871507708151921,0.557694977114413,0.230850775511391,9.91295885868911,0.69169171316418,0.987334088507493,0.869178975376065,1.91400695839152,2.65633020865401,0.533034776018635,0,2.66866435871542,0.498635045700469,1.57916962432026,0.980312671588698,0.167821586975843,1.3282761290693,1.11255605286265,3.37596903244843,1.30586246527318,1.83758992864123,3.46221823587346,0.995261931078505,0,0,1.18608451472249,0.741383633679017,1.14864144456001,0.067401132980677,0.802577647298789,0,0,0.19566461893209,0.485560759068186,1.57833761139756,1.20990716048664,1.83643656978294,0.695052375913368,3.00646838828985,3.11064574191741,1.32930774541437,1.98595173525299,0.941798755221676,1.19472429772959,1.42304773014896,1.66409607615766,0.520679215005393,1.27390116638691,0.435296032902013,0,2.92376255201748,2.90268993867255,2.99666200053361,4.84481196613934,0.387956065953678,0,0.90392296312213,0.959293472527256,2.58328995213887,0.569797163602908,1.75996244461323,0.881747022766871,0,1.39866726707491,0.288180834308212,0.916292769327325,4.11827994868715,0.432164393964449,0.49701014226173,0,4.07712618220842,3.13808538937,1.01998217636322,2.88950589901519,0.600420288709789,0.684526894459965,1.27746588066972,1.71906176567983,1.57732412567589,0.279282401272254,0.229160424011684,0,0.599037001496973,0,0.223171457441873,1.07493555978762,3.24269895188163,0,5.04212366766231,5.60427836991932,5.05526578906387,0.885847333632739,2.2015066337104,1.59045937961861,0,4.01882871162548,4.81388028090318,3.32352270423348,0.674921674654501,0,0.182248669974074,1.34173875039706,1.49730843868477,2.36045646607491,2.64000841298516,0.35857467866569,0,0.714695326373367,0.662091970365432,2.28841683889275,3.25799761052228,2.5926644736038,2.28611152076586,1.19730191562487,0.656740165994712,2.3854323049959,4.4191715692849,1.46552233678082,1.32506888912221,0.258565912723101,0.39669780522807,0.342173675768659,0,0.106787412567695,0.471612915298998,0,0,0,0,3.19170628885091,0,0.2506898940227,0,0,0.314108192500469,0,0.488105059607853,0.1251909307065,0,0.554645257684261,0.124192805882767,3.04366996859708,0.999843263696853,1.36484205787483,0.285465333544967,2.11739237728355,0.936669811613763,1.7390523433299,3.13435086062435,2.57084640831947,1.10961172300523,1.51522404220071,1.50940741051545,3.55924488638614,1.37304041038154,1.66354016139563,6.68379962505956,7.09704719950243,3.66382564476516,0.449803112163605,4.50262574941152,6.22059311761283,3.98762571836992,1.04349012362347,8.41442610384423,10.6625459407263,2.44122439922797,4.72806513926655,3.22231671127465,2.32016879939247,1.99047944349308,0.400027764663154,3.09056134664514,3.36749488765919,0,0.963099152036517,5.14659819299822,4.4369029634086,1.13352962756136,1.62065732026684,1.22368352253234,1.07453304648892,0,0.877136198314828,2.47364804324233,3.27953865060555,1.68942440653073,27.4178424889103,0.690860683462397,0,0.414775308455192,0,0.132864840313363,0,1.31043939538565,1.47463745252232,0.633936370075881,0.999936979274649,1.49368421571797,0,0,1.65695355226657,0.699397538597222,0,3.58104239650225,4.63646689005732,4.87524419753279,3.9315469749125,0.169732529954025,0.637724760305049,0.123935764259002,0.558644917973244,0.954013051960256,0.47317047000752,1.60114149657094,2.1160556621441,0.918736432059601,0.385375350578757,0,0.159633859057151,0,1.00828678488687,0.0691572524642179,0.161475645631851,0,5.10368136205333,0.353909170043221,0.366857197043358,0.808679663052368,1.52552838186867,3.4517996303005,2.18807844327902,0.526472298444801,0.80682027481408,0,0,1.63771917510097,0.739280431085226,0.270150338473579,0,0.620060389503552,0.126831620387814,1.09394961803644,0,0.496211178389294,1.05522746615772,0.638812138197976,0.535701835878287,0,0.606965604236632,0,0.79832133146375,0.230467975111559,2.22934412268644,0.135939465953663,0.131545547125698,0.709163045303809,1.11231401892069,0.235479278551542,0.785577949580009,0.560544326627578,0.913158720509496,26.9909489023277,7.6440270061928,0.214429632529969,3.00225862292181,1.27865567904938,0.347716544605159,0.801711364730253,1.65772931330429,0.6828739083758,0,0,1.77498001095848,2.38597533325642,0.423387050190929,0.22910686854405,0.62041277132864,0,0.447421727191169,0.196300467230486,0,0,0,0,0.971421986118279,2.80727356154527,4.97376937903421,0.83244063544298,1.46829906650648,2.52863188514487,1.35866559210006,0.154348316215889,0.874238242015829,0,0.245148321753905,0.235676547101626,0.196308467114945,0.594092800654172,0,1.52934403219035,0.187967835959707,0.322289439867886,0.199882311849858,0.178553938605658,0.352894871715692,0.401206833445841,0,0,0.143339583151451,3.78651749263643,0.339957450954573,1.74540276136151,1.0580536810308,5.20793025433452,1.84870251452567,1.73050624849516,2.01866279736126,1.63898357945543,1.26698501011437,2.85568723277549,1.3360870263278,1.56221329209236,2.25636785363138,0.682008283964155,0.535928260312357,0,0.517164979309476,0,0.714193294391221,0.0645889098360061,0.496597714366863,1.12131862580613,0.12729431655633,0.606351566874658,0,0.684466602170562,0.0673520530145875,0.286888821570705,0.665320713092027,3.25613074443898,0.640364075266293,0,0.808426818959282,14.0784565442073,0.733448665097199,0.813792356631477,0,0,1.28227396921293 | |||
|short_description=p2@KDELC1 | |||
}} |
Revision as of 18:33, 11 January 2014
Short description: | p2@KDELC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KDELC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000460338_5end |
EntrezGene: | KDELC1 |
HGNC: | 19350 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.88e-15 | 61 |
electrically active cell | 1.88e-15 | 61 |
muscle precursor cell | 4.86e-15 | 58 |
myoblast | 4.86e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.86e-15 | 58 |
muscle cell | 1.05e-13 | 55 |
vascular associated smooth muscle cell | 4.52e-13 | 32 |
smooth muscle cell | 4.17e-11 | 43 |
smooth muscle myoblast | 4.17e-11 | 43 |
mesodermal cell | 2.67e-10 | 121 |
stem cell | 3.05e-10 | 441 |
multi fate stem cell | 1.64e-09 | 427 |
somatic stem cell | 3.93e-09 | 433 |
fibroblast | 6.62e-09 | 76 |
embryonic cell | 1.38e-08 | 250 |
cardiocyte | 9.48e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 5.60e-14 | 160 |
entire embryonic mesenchyme | 5.60e-14 | 160 |
skeletal muscle tissue | 8.11e-13 | 62 |
striated muscle tissue | 8.11e-13 | 62 |
myotome | 8.11e-13 | 62 |
somite | 2.09e-12 | 71 |
presomitic mesoderm | 2.09e-12 | 71 |
presumptive segmental plate | 2.09e-12 | 71 |
dermomyotome | 2.09e-12 | 71 |
trunk paraxial mesoderm | 2.09e-12 | 71 |
dense mesenchyme tissue | 3.33e-12 | 73 |
paraxial mesoderm | 5.87e-12 | 72 |
presumptive paraxial mesoderm | 5.87e-12 | 72 |
epithelial vesicle | 5.91e-12 | 78 |
muscle tissue | 7.79e-12 | 64 |
musculature | 7.79e-12 | 64 |
musculature of body | 7.79e-12 | 64 |
trunk mesenchyme | 3.65e-10 | 122 |
multilaminar epithelium | 6.17e-10 | 83 |
trunk | 6.63e-10 | 199 |
epithelial tube | 1.38e-09 | 117 |
artery | 2.03e-09 | 42 |
arterial blood vessel | 2.03e-09 | 42 |
arterial system | 2.03e-09 | 42 |
unilaminar epithelium | 8.97e-08 | 148 |
systemic artery | 2.01e-07 | 33 |
systemic arterial system | 2.01e-07 | 33 |