FFCP PHASE1:Hg19::chr16:284788..284844,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83986 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14163 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H0X4,C9JR71,C9J3Y6,C9J1M4,C9JP72,B4DGG1,C9JJN3,C9K0C5,C9IYB9 | |||
|association_with_transcript=0bp_to_ENST00000301678,ENST00000301679,ENST00000419173,ENST00000420046,ENST00000426695,ENST00000438220,ENST00000442458,ENST00000447499,ENST00000449945,ENST00000450082,ENST00000453430,NM_032039,uc002cgf.2,uc002cgg.2,uc010bqr.2,uc010uud.1_5end | |||
|description=CAGE_peak_1_at_ITFG3_5end | |||
|id=chr16:284788..284844,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.59e-14!180;CL:0000222!1.67e-12!119;CL:0002321!4.19e-11!248;CL:0000220!7.28e-11!246;CL:0000183!3.87e-10!59;CL:0000680!4.03e-08!57;CL:0000056!4.03e-08!57;CL:0000355!4.03e-08!57;CL:0000187!6.05e-08!54;CL:0000192!1.59e-07!42;CL:0000514!1.59e-07!42;CL:0000393!3.20e-07!60;CL:0000211!3.20e-07!60 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.61e-13,121;CL:0002321,1.88e-11,250;CL:0000680,3.53e-08,58;CL:0000056,3.53e-08,58;CL:0000355,3.53e-08,58;CL:0000187,5.31e-08,55;CL:0000192,1.42e-07,43;CL:0000514,1.42e-07,43;CL:0000393,2.77e-07,61;CL:0000211,2.77e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.27e-14!118;UBERON:0002100!3.33e-11!216;UBERON:0004872!3.67e-11!84;UBERON:0000119!4.50e-11!312;UBERON:0000483!8.83e-11!309;UBERON:0005256!9.63e-11!143;UBERON:0000475!1.08e-10!365;UBERON:0002049!1.17e-10!79;UBERON:0007798!1.17e-10!79;UBERON:0000468!4.33e-10!659;UBERON:0003103!4.50e-10!69;UBERON:0002385!6.07e-10!63;UBERON:0001015!6.07e-10!63;UBERON:0000383!6.07e-10!63;UBERON:0001134!2.41e-09!61;UBERON:0002036!2.41e-09!61;UBERON:0003082!2.41e-09!61;UBERON:0000481!4.03e-09!347;UBERON:0004290!1.32e-08!70;UBERON:0000025!1.70e-08!194;UBERON:0001009!2.22e-08!113;UBERON:0000490!3.02e-08!138;UBERON:0007100!3.66e-08!27;UBERON:0000055!4.12e-08!69;UBERON:0000914!4.31e-08!83;UBERON:0002329!4.31e-08!83;UBERON:0003077!4.31e-08!83;UBERON:0003059!4.31e-08!83;UBERON:0007282!4.31e-08!83;UBERON:0009618!4.31e-08!83;UBERON:0007285!4.31e-08!83;UBERON:0000486!5.14e-08!82;UBERON:0009569!6.13e-08!113;UBERON:0001981!7.03e-08!60;UBERON:0007500!7.03e-08!60;UBERON:0004537!7.03e-08!60;UBERON:0006965!7.03e-08!60;UBERON:0004535!2.18e-07!110;UBERON:0004111!5.29e-07!241;UBERON:0000477!5.97e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.84e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.68e-14,117;UBERON:0003104,5.50e-14,160;UBERON:0009142,5.50e-14,160;UBERON:0000119,6.46e-12,309;UBERON:0000483,1.30e-11,306;UBERON:0007503,4.24e-11,78;UBERON:0004872,1.03e-10,83;UBERON:0002100,1.23e-10,199;UBERON:0002049,3.27e-10,78;UBERON:0007798,3.27e-10,78;UBERON:0003103,5.14e-10,68;UBERON:0002385,5.35e-10,64;UBERON:0001015,5.35e-10,64;UBERON:0000383,5.35e-10,64;UBERON:0005256,9.66e-10,122;UBERON:0001134,2.12e-09,62;UBERON:0002036,2.12e-09,62;UBERON:0003082,2.12e-09,62;UBERON:0007524,1.01e-08,73;UBERON:0002329,1.14e-08,71;UBERON:0003059,1.14e-08,71;UBERON:0007282,1.14e-08,71;UBERON:0004290,1.14e-08,71;UBERON:0009618,1.14e-08,71;UBERON:0003077,2.57e-08,72;UBERON:0007285,2.57e-08,72;UBERON:0000025,2.69e-08,192;UBERON:0007100,3.66e-08,27;UBERON:0000490,4.12e-08,148;UBERON:0000486,4.40e-08,83;UBERON:0001009,5.04e-08,112;UBERON:0009569,9.12e-08,112;UBERON:0000055,1.06e-07,68;UBERON:0007500,1.87e-07,59;UBERON:0001981,1.87e-07,59;UBERON:0004537,1.87e-07,59;UBERON:0006965,1.87e-07,59;UBERON:0004111,4.46e-07,240;UBERON:0004535,4.73e-07,109 | |||
|phase1_expression=15.4426622379973,20.7677508174254,12.4039875604455,30.0219895059391,29.499432232201,23.55314015071,22.796989035148,7.58063848112197,24.0290777943851,12.7781646980785,27.2142455509247,11.1405099786388,14.7709507807934,11.8815698841645,28.5001743126008,10.0848771967766,15.0673632005994,10.2243412654232,20.4931775492013,18.3450376534414,26.1120884792644,23.5091041108566,9.44578757532487,7.25434452886286,12.5542639594803,3.20936304141395,3.61242593579761,2.83358812729245,4.32700704533794,2.30297638858328,7.1215416725395,6.43594857135249,14.1566781825778,12.5716363456708,3.95082722959538,3.9807385096478,6.75281010470149,6.64794490238253,8.02177789880567,5.20826089718044,7.83704159839735,7.12566065241755,6.18181362322048,3.78035420826868,2.64513160582167,4.36651310138069,3.71886459049095,4.52284676824008,3.40677007984614,2.8769239232215,4.86705342405291,2.83778675866302,3.10271112662957,3.87290810150296,1.35426486594342,5.27078550719293,3.82068610080984,1.79778787556068,3.67300670845083,1.60464513538047,5.11469700639233,4.28806690242731,3.59034583718937,3.40979800426155,3.77272010217159,2.26954089876456,3.73693349397345,4.52247597462138,2.08593167368081,4.77815458351257,3.02699751316684,1.10483290796269,2.53169909952708,4.22510572623884,5.52771179909113,7.12839394728478,6.40273197535022,6.00707571366025,5.78612112109488,5.70025487482497,5.37075028437543,2.92262646023414,0,2.73069305631066,0.889509253863555,1.70692089026603,4.40435585739614,4.59801951963587,3.30522436392431,2.86216126360609,5.12291672198504,4.69789751496751,3.05818582500183,3.96513985737078,3.36305137788922,11.0621315605532,2.360517241366,2.75107533924415,3.49522548299166,3.34372990781356,3.2592226663359,2.8406868344084,5.84480185223734,2.67385096524417,2.94605907474837,1.55073726208535,3.5204502289452,4.35510487067296,4.42201781703586,2.79544437826249,3.31620021343018,1.44901542867526,3.85545064221357,2.1403266247177,5.22677619024884,1.0197840842781,3.06576394881537,2.06176467289578,4.30133476433155,1.91139248594458,1.95325036156926,1.90090408889675,3.01150238155546,2.94369205655162,1.24930726552346,1.89421801635213,2.46338399076314,2.21767417547206,2.13952156626806,3.33096128930438,14.6284119788377,13.4140171940727,17.9007586580942,11.2046137239216,5.51471701699479,12.7464936685525,7.15757352345989,18.0054902011975,8.79173799625831,12.8603050528287,12.2090352113445,10.1508783510727,17.486173838042,16.6852999252993,5.8418530857843,6.61693001737215,10.1048049994338,1.43094374583205,2.28797964312051,3.34311751196608,8.54678351676832,17.2046919021225,10.4142150482278,10.7408508965562,26.4284644812241,12.105193845363,13.5846728248927,12.9208379584664,9.60568909254118,10.7110596084694,11.2792208790561,7.60272105718513,17.8165302010164,8.82391392830085,25.1144003843345,7.41187744757862,14.8189385933272,10.3602562044656,7.66583187329416,12.3404535743857,8.06087673293792,3.9534125230819,11.6334079244498,12.210633459991,17.8909902610315,9.87717990983722,12.4464629964426,24.9547860051468,14.1867352879343,23.5484592059769,5.33744978648525,29.8467733584764,15.5605517699883,11.0462751097144,11.769257024169,19.2223933109063,12.67587033856,10.7787858643546,9.98912245857026,2.2818872861778,9.71416423586707,7.63324241184472,5.98929894162087,6.03938468819669,7.14539599392126,5.28187564440602,14.7755867081345,14.2560342873846,15.083282685992,13.6524204290704,35.2122889489957,6.39677233025452,8.13270379167767,5.26421819419948,27.6555901154928,15.017901994152,22.6859468948961,7.59995627172141,8.25192324168765,13.0270007179326,8.68920794754204,16.5050102846421,11.3357782162283,8.75977836155139,11.1670113798954,11.9831195891299,10.0360115316035,6.81571190459109,6.71964260088785,16.6495438523376,24.1406522911298,12.9970206713656,8.98671139245584,4.63826047591912,5.18217629122586,6.59650569394709,15.0027658539402,10.7349112340403,12.0841700584299,14.4088866471365,12.868363394657,9.85438869504741,23.4674298494724,16.0810234548221,16.5761905622977,9.75172648867156,14.4375896333917,7.8082488026297,7.41772636343647,6.02527574708705,5.73528658208448,5.88274499049497,5.45722423955522,7.41572194880904,7.6526371398885,6.54070166808864,20.6683527294901,26.6459370226547,23.8712926572212,29.4017422771084,5.07020139287323,6.87979051674338,12.9973779469909,4.85609409356116,8.24022538238861,25.3920359241818,5.5972645558399,12.3641928583382,5.73015142746296,9.53660985132855,10.7516740752407,21.8386304908711,7.21656710126366,19.3603776308378,20.3117041027971,9.3838191044698,10.648666789262,9.32245345949531,18.9649055510226,16.3112370798026,6.64785916435973,9.36017060556951,11.1473371716546,0.93733833986777,5.71139235876122,5.81277898693785,5.10483579406235,3.48760726216754,7.28427090413901,2.95597942737566,10.5658120815871,10.9883901236609,10.9531164596891,11.9930311755061,19.6208493362802,27.1211782146377,16.4104426094066,44.4788359659034,13.676056529542,8.10926256178577,16.0062802273124,13.2314679527526,21.798003441664,6.7471222955274,13.7028018703244,46.49533796074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| |||
|short_description=p1@ITFG3 | |||
}} |
Revision as of 01:36, 12 January 2014
Short description: | p1@ITFG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITFG3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000301678, ENST00000301679, ENST00000419173, ENST00000420046, ENST00000426695, ENST00000438220, ENST00000442458, ENST00000447499, ENST00000449945, ENST00000450082, ENST00000453430, NM_032039, uc002cgf.2, uc002cgg.2, uc010bqr.2, uc010uud.1_5end |
EntrezGene: | ITFG3 |
HGNC: | 14163 |
UniProt: | Q9H0X4C9JR71C9J3Y6C9J1M4C9JP72B4DGG1C9JJN3C9K0C5C9IYB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.61e-13 | 121 |
embryonic cell | 1.88e-11 | 250 |
muscle precursor cell | 3.53e-08 | 58 |
myoblast | 3.53e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.53e-08 | 58 |
muscle cell | 5.31e-08 | 55 |
smooth muscle cell | 1.42e-07 | 43 |
smooth muscle myoblast | 1.42e-07 | 43 |
electrically responsive cell | 2.77e-07 | 61 |
electrically active cell | 2.77e-07 | 61 |