FFCP PHASE1:Hg19::chr16:29874440..29874461,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10423 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1769 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=63bp_to_uc002dul.2_5end | |||
|description=CAGE_peak_2_at_CDIPT_5end | |||
|id=chr16:29874440..29874461,- | |||
|ontology_enrichment_celltype=CL:0000055!8.39e-12!180;CL:0000183!1.05e-09!59;CL:0000192!2.10e-09!42;CL:0000514!2.10e-09!42;CL:0000680!3.18e-09!57;CL:0000056!3.18e-09!57;CL:0000355!3.18e-09!57;CL:0000187!1.93e-08!54;CL:0000393!1.67e-07!60;CL:0000211!1.67e-07!60;CL:0000220!4.00e-07!246;CL:0002321!4.73e-07!248 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.54e-10,43;CL:0000514,6.54e-10,43;CL:0000680,1.04e-09,58;CL:0000056,1.04e-09,58;CL:0000355,1.04e-09,58;CL:0000187,6.68e-09,55;CL:0000393,6.54e-08,61;CL:0000211,6.54e-08,61;CL:0002321,6.82e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.70e-11!659;UBERON:0000467!5.21e-09!625;UBERON:0000480!7.56e-09!626;UBERON:0000914!1.60e-08!83;UBERON:0002329!1.60e-08!83;UBERON:0003077!1.60e-08!83;UBERON:0003059!1.60e-08!83;UBERON:0007282!1.60e-08!83;UBERON:0009618!1.60e-08!83;UBERON:0007285!1.60e-08!83;UBERON:0000922!2.87e-08!612;UBERON:0002050!5.35e-08!605;UBERON:0005423!5.35e-08!605;UBERON:0000923!6.48e-08!604;UBERON:0005291!6.48e-08!604;UBERON:0006598!6.48e-08!604;UBERON:0002532!6.48e-08!604;UBERON:0002385!6.66e-08!63;UBERON:0001015!6.66e-08!63;UBERON:0000383!6.66e-08!63;UBERON:0004290!7.48e-08!70;UBERON:0001134!1.35e-07!61;UBERON:0002036!1.35e-07!61;UBERON:0003082!1.35e-07!61;UBERON:0000486!2.12e-07!82;UBERON:0005256!3.14e-07!143;UBERON:0000475!3.75e-07!365 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.69e-09,78;UBERON:0007524,8.91e-09,73;UBERON:0003077,1.01e-08,72;UBERON:0007285,1.01e-08,72;UBERON:0002385,1.38e-08,64;UBERON:0001015,1.38e-08,64;UBERON:0000383,1.38e-08,64;UBERON:0002329,2.03e-08,71;UBERON:0003059,2.03e-08,71;UBERON:0007282,2.03e-08,71;UBERON:0004290,2.03e-08,71;UBERON:0009618,2.03e-08,71;UBERON:0001134,2.88e-08,62;UBERON:0002036,2.88e-08,62;UBERON:0003082,2.88e-08,62;UBERON:0000486,5.47e-08,83;UBERON:0000926,1.07e-07,315;UBERON:0004120,1.07e-07,315;UBERON:0006603,1.07e-07,315;UBERON:0002050,1.12e-07,564;UBERON:0000923,1.84e-07,560;UBERON:0010316,1.84e-07,560;UBERON:0005291,1.84e-07,560;UBERON:0006598,1.84e-07,560;UBERON:0010317,1.84e-07,560;UBERON:0002532,1.84e-07,560;UBERON:0005256,5.74e-07,122;UBERON:0005423,6.22e-07,581 | |||
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| |||
|short_description=p2@CDIPT | |||
}} |
Revision as of 03:04, 12 January 2014
Short description: | p2@CDIPT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDIPT_5end |
Coexpression cluster: | NA |
Association with transcript: | 63bp_to_uc002dul.2_5end |
EntrezGene: | CDIPT |
HGNC: | 1769 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.54e-10 | 43 |
smooth muscle myoblast | 6.54e-10 | 43 |
muscle precursor cell | 1.04e-09 | 58 |
myoblast | 1.04e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.04e-09 | 58 |
muscle cell | 6.68e-09 | 55 |
electrically responsive cell | 6.54e-08 | 61 |
electrically active cell | 6.54e-08 | 61 |
embryonic cell | 6.82e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 6.69e-09 | 78 |
dense mesenchyme tissue | 8.91e-09 | 73 |
paraxial mesoderm | 1.01e-08 | 72 |
presumptive paraxial mesoderm | 1.01e-08 | 72 |
muscle tissue | 1.38e-08 | 64 |
musculature | 1.38e-08 | 64 |
musculature of body | 1.38e-08 | 64 |
somite | 2.03e-08 | 71 |
presomitic mesoderm | 2.03e-08 | 71 |
presumptive segmental plate | 2.03e-08 | 71 |
dermomyotome | 2.03e-08 | 71 |
trunk paraxial mesoderm | 2.03e-08 | 71 |
skeletal muscle tissue | 2.88e-08 | 62 |
striated muscle tissue | 2.88e-08 | 62 |
myotome | 2.88e-08 | 62 |
multilaminar epithelium | 5.47e-08 | 83 |
mesoderm | 1.07e-07 | 315 |
mesoderm-derived structure | 1.07e-07 | 315 |
presumptive mesoderm | 1.07e-07 | 315 |
embryonic structure | 1.12e-07 | 564 |
germ layer | 1.84e-07 | 560 |
germ layer / neural crest | 1.84e-07 | 560 |
embryonic tissue | 1.84e-07 | 560 |
presumptive structure | 1.84e-07 | 560 |
germ layer / neural crest derived structure | 1.84e-07 | 560 |
epiblast (generic) | 1.84e-07 | 560 |
trunk mesenchyme | 5.74e-07 | 122 |
developing anatomical structure | 6.22e-07 | 581 |