FFCP PHASE1:Hg19::chr17:7081473..7081500,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:7081473..7081500,- | |||
|id=chr17:7081473..7081500,- | |||
|ontology_enrichment_celltype=CL:0002139!7.71e-19!24;CL:0000115!1.60e-18!35;CL:0002078!3.77e-17!44;CL:0000071!3.96e-15!18;CL:0002546!3.96e-15!18;CL:0002321!1.13e-11!248;CL:0000220!5.93e-11!246;CL:0000222!6.08e-10!119;CL:0000066!1.02e-09!254;CL:0000213!1.23e-09!57;CL:0000215!1.23e-09!57;CL:1000449!1.28e-08!16;CL:1000413!3.72e-08!9;CL:0002319!3.92e-07!25;CL:1000497!5.71e-07!18;CL:0002518!5.71e-07!18;CL:0002681!8.39e-07!13;CL:0002584!8.39e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.46e-42;24!CL:0000115;5.52e-36;36!CL:0000071;2.52e-33;18!CL:0002078;2.93e-27;45!CL:1000413;5.24e-17;9!CL:0000213;1.77e-15;58!CL:0000215;1.77e-15;58!CL:1000449;1.23e-14;15!CL:1000497;1.47e-12;17!CL:0002518;1.47e-12;17!CL:0002543;1.52e-12;6!CL:0002544;6.49e-12;6!CL:0000540;7.46e-11;6!CL:0000404;7.46e-11;6!CL:0002138;1.52e-10;6!CL:0002681;1.73e-10;12!CL:0002584;1.73e-10;12!CL:1000507;6.83e-10;10!CL:1000494;6.83e-10;10!CL:0002322;9.76e-10;5!CL:0000182;3.62e-08;12!CL:0002144;4.92e-07;3!CL:0002618;6.59e-07;3!CL:0000244;9.60e-07;4!CL:0000731;9.60e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.06e-44,36;CL:0002139,5.22e-42,24;CL:0002078,1.29e-40,45;CL:0000071,2.78e-33,18;CL:0002546,2.78e-33,18;CL:0000213,2.22e-25,58;CL:0000215,2.22e-25,58;CL:1000413,5.92e-17,9;CL:1000449,5.99e-15,15;CL:0002321,1.06e-14,250;CL:0000066,5.85e-14,253;CL:0000222,2.09e-13,121;CL:1000497,7.89e-13,17;CL:0002518,7.89e-13,17;CL:0002543,1.64e-12,6;CL:0002544,6.49e-12,6;CL:0000540,6.82e-11,6;CL:0000031,6.82e-11,6;CL:0000404,6.82e-11,6;CL:0002681,7.58e-11,12;CL:0002584,7.58e-11,12;CL:0000047,1.97e-10,8;CL:0005020,2.79e-10,6;CL:0002138,2.79e-10,6;CL:0005022,2.79e-10,6;CL:1000507,3.57e-10,10;CL:1000494,3.57e-10,10;CL:0002322,5.80e-10,5;CL:0000182,2.04e-08,12;CL:0000076,2.46e-08,63;CL:0002144,4.42e-07,3;CL:0002618,7.77e-07,3;CL:0000244,9.54e-07,4;CL:0000731,9.54e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;2.52e-33;18!CL:0000031;7.46e-11;6!CL:0005022;1.52e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.45e-19!312;UBERON:0000483!3.26e-18!309;UBERON:0000025!1.14e-17!194;UBERON:0004111!1.54e-15!241;UBERON:0003914!2.13e-15!118;UBERON:0000477!2.79e-15!286;UBERON:0001986!3.96e-15!18;UBERON:0004638!3.96e-15!18;UBERON:0004852!3.96e-15!18;UBERON:0000487!1.47e-11!22;UBERON:0002049!1.64e-11!79;UBERON:0007798!1.64e-11!79;UBERON:0000055!1.82e-10!69;UBERON:0006914!2.31e-10!25;UBERON:0000490!5.95e-10!138;UBERON:0000922!1.56e-09!612;UBERON:0004535!5.49e-09!110;UBERON:0004211!1.28e-08!16;UBERON:0001285!1.28e-08!16;UBERON:0007684!1.28e-08!16;UBERON:0003220!1.28e-08!16;UBERON:0004208!1.28e-08!16;UBERON:0006555!1.64e-08!17;UBERON:0005103!1.64e-08!17;UBERON:0000083!1.64e-08!17;UBERON:0009201!1.64e-08!17;UBERON:0004819!1.64e-08!17;UBERON:0006553!1.64e-08!17;UBERON:0003074!1.64e-08!17;UBERON:0003060!1.64e-08!17;UBERON:0001009!3.31e-08!113;UBERON:0000468!3.38e-08!659;UBERON:0003915!3.72e-08!9;UBERON:0004700!3.72e-08!9;UBERON:0001917!3.72e-08!9;UBERON:0005172!4.02e-08!55;UBERON:0005173!4.02e-08!55;UBERON:0002050!7.17e-08!605;UBERON:0005423!7.17e-08!605;UBERON:0000481!8.90e-08!347;UBERON:0000923!1.06e-07!604;UBERON:0005291!1.06e-07!604;UBERON:0006598!1.06e-07!604;UBERON:0002532!1.06e-07!604;UBERON:0000080!1.12e-07!18;UBERON:0002120!1.12e-07!18;UBERON:0004875!1.12e-07!18;UBERON:0005721!1.12e-07!18;UBERON:0005754!1.12e-07!18;UBERON:0007297!1.12e-07!18;UBERON:0001981!1.14e-07!60;UBERON:0007500!1.14e-07!60;UBERON:0004537!1.14e-07!60;UBERON:0006965!1.14e-07!60;UBERON:0001225!8.39e-07!13;UBERON:0008987!8.39e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.52e-33;18!UBERON:0001986;2.52e-33;18!UBERON:0004852;2.52e-33;18!UBERON:0000487;3.50e-26;22!UBERON:0006914;8.85e-25;25!UBERON:0003915;5.24e-17;9!UBERON:0004700;5.24e-17;9!UBERON:0001917;5.24e-17;9!UBERON:0006555;1.23e-14;15!UBERON:0004819;1.23e-14;15!UBERON:0001285;1.23e-14;15!UBERON:0007684;1.23e-14;15!UBERON:0000490;1.97e-14;33!UBERON:0006554;2.59e-14;30!UBERON:0001008;2.59e-14;30!UBERON:0000353;2.61e-12;15!UBERON:0003914;9.10e-12;74!UBERON:0002113;2.36e-11;24!UBERON:0011143;2.36e-11;24!UBERON:0001225;1.73e-10;12!UBERON:0008987;1.73e-10;12!UBERON:0000055;1.88e-10;65!UBERON:0004211;6.83e-10;10!UBERON:0009773;6.83e-10;10!UBERON:0001231;6.83e-10;10!UBERON:0004810;6.83e-10;10!UBERON:0000922;8.17e-09;49!UBERON:0000489;8.59e-09;29!UBERON:0007500;1.09e-08;56!UBERON:0001981;1.09e-08;56!UBERON:0004537;1.09e-08;56!UBERON:0002049;1.95e-08;75!UBERON:0007798;1.95e-08;75!UBERON:0001851;5.12e-08;15!UBERON:0001638;5.26e-08;9!UBERON:0003920;5.26e-08;9!UBERON:0004582;5.26e-08;9!UBERON:0001473;1.08e-07;8!UBERON:0004536;1.08e-07;8!UBERON:0006558;1.08e-07;8!UBERON:0000025;1.29e-07;93!UBERON:0005172;3.21e-07;52!UBERON:0005173;3.21e-07;52!UBERON:0010523;4.92e-07;3!UBERON:0001915;4.92e-07;3!UBERON:0001982;4.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.78e-33,18;UBERON:0001986,2.78e-33,18;UBERON:0004852,2.78e-33,18;UBERON:0000487,3.78e-26,22;UBERON:0006914,9.12e-25,25;UBERON:0003914,1.35e-18,117;UBERON:0000055,5.28e-17,68;UBERON:0002049,5.43e-17,78;UBERON:0007798,5.43e-17,78;UBERON:0003915,5.92e-17,9;UBERON:0004700,5.92e-17,9;UBERON:0001917,5.92e-17,9;UBERON:0004211,5.99e-15,15;UBERON:0009773,5.99e-15,15;UBERON:0001231,5.99e-15,15;UBERON:0001285,5.99e-15,15;UBERON:0007684,5.99e-15,15;UBERON:0004208,5.99e-15,15;UBERON:0006555,8.03e-14,16;UBERON:0004819,8.03e-14,16;UBERON:0004535,4.73e-13,109;UBERON:0000353,9.34e-13,15;UBERON:0007500,1.52e-12,59;UBERON:0001981,1.52e-12,59;UBERON:0004537,1.52e-12,59;UBERON:0006965,1.52e-12,59;UBERON:0001009,1.98e-12,112;UBERON:0005172,1.66e-11,54;UBERON:0005173,1.66e-11,54;UBERON:0001225,7.58e-11,12;UBERON:0008987,7.58e-11,12;UBERON:0002113,1.85e-10,26;UBERON:0003918,1.85e-10,26;UBERON:0011143,1.85e-10,26;UBERON:0005095,1.85e-10,26;UBERON:0007687,1.85e-10,26;UBERON:0000025,2.54e-10,192;UBERON:0004810,3.57e-10,10;UBERON:0002417,9.59e-10,60;UBERON:0000916,9.59e-10,60;UBERON:0004111,2.01e-09,240;UBERON:0001851,2.72e-08,15;UBERON:0000489,3.28e-08,31;UBERON:0001638,5.52e-08,9;UBERON:0003920,5.52e-08,9;UBERON:0004582,5.52e-08,9;UBERON:0004872,9.14e-08,83;UBERON:0006554,1.23e-07,47;UBERON:0001473,1.67e-07,8;UBERON:0004536,1.67e-07,8;UBERON:0006558,1.67e-07,8;UBERON:0001008,2.19e-07,48;UBERON:0010523,4.42e-07,3;UBERON:0001915,4.42e-07,3;UBERON:0001982,4.42e-07,3;UBERON:0000483,5.55e-07,306;UBERON:0000119,8.84e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,0.436882744260345,0,0.495065411840187,1.32558950291166,0.672325146451775,0.602694528023977,0.730310090387373,1.46379839637152,1.47745269692145,0.408001382488506,0.626909442956176,0.572471974262113,0.547497700291537,0.502170558379211,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0.567208902984407,0.886917589850256,1.22968699970376,1.24430121722827,0,0,0,0.348259474598534,0,0,0,0,4.57153536943422,6.881876760849,2.08284300964557,5.08777147731609,3.77549492588915,4.40188867104108,2.08994966536811,1.55050055501597,1.06729878806013,1.00416183829401,2.81980521976403,6.0821768457481,5.12530320851156,1.47065232138347,4.86085168729056,3.21479021822687,3.14341121676638,4.27923625836624,4.5994991239765,6.6448596169769,5.49605231791222,0,0,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,1.34710672069688,0.490385709340376,0.151357427644931,1.15235184896,0.234321431833797,0,0.570471821544449,0.298897361103602,0.352303495931295,0,0,0,0.737005903870608,0,0,0,0.910161361938026,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0.323292113637624,0,0,0,0,0,0,2.92736894711029,3.18071443971565,4.18298194330266,1.96956004529204,3.5324919122588,1.82488679537915,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0,0,2.95262181849859,2.80483547606892,0.8231480226628,0,1.26755034821831,2.94848165003288,0.590789906681404,0.441463099414651,0.491953754172454,0.857839051492628,0,0,0.201057944823262,0.0925884451585296,0.651616610620649,0,0,0.695582429850461,0,4.18662698507114,2.77791307545966,3.61482889245737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,0.784917590417525,0.87192013766656,0.36669142910475,0.258543431515556,0,0.845302752556,0,1.04007436911366,0.257207374262142,0,0.532844358032199,0.428933980974443,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.508189248444927,1.30139853857622,1.54657762555539,2.51274398001523,1.27587750330633,0,0,0,0.24538298343828,2.00068208423871,0.542530047399471,0,0.178428988797162,0,0,0,0,0,0,0.921845842708516,0,0,0,0,0,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0.116210378459959,0.362578348774867,0,0.0920809889358963,0,0.364182336013434,0.393373244878272,1.80479845162965,1.77135275340154,6.27479815341484,1.46139224653261,1.16106791782163,2.27466768141793,1.70093705276516,0.431831832204279,13.880452742126,0.812839312631559,2.50844886927427,0.254876273045038,1.66215201785745,1.56712328305525,0,0,0.512900250232778,0.656029291399411,0.325378394664303,0.309123034943167,0.0915694648183434,0.165018999841176,0,0,0,1.35339005608971,0.616194468458578,0.614014698904518,0.137836572484531,0.537101224341368,0.145016693914229,0.767039646744908,0.712256285173899,0,0,0.255225424989168,0,0.929691098594572,0,1.3940745403212,0,0.532306030317022,0.869932992075073,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0.842516912477962,0.48763373908959,0,0,0,0,0,0.551365343546124,0,0,1.15755106853338,0,0.202910376962704,1.239293992399,1.97186921772569,0.430234056612155,0.491245205065606,0.35667105148125,0,0,0,0,1.39973888097993,0,0.670302275535787,0,0,1.29151611801369,1.68471475667626,1.33029046061003,1.37834040124176,0,0,0,0,0,0,0,0,1.6023610669121,0,0.490080431962063,0,0,0.0711418433484141,0.956557636372934,0,0.383010740264733,0.211673582723883,0.324621940274555,0,0,0,0,1.18504244461122,0,0,0.425846237690326,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0.99921590399346,0,0,0,0,0.111443384277478,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0.844501632511974,0,0,3.02319297425131,0.511343412510774,0,0,0.269605053441981,0,0,0,0,0,0.969332746095218,1.02044907978036,3.99227596002388,0,0,0,0,0,0.709163045303809,0.344743373241465,0.291604613383254,4.16699987839901,0,0.120596438625408,0,0,0.295547618953547,0.87754158861589,0.544692317594951,0,0,0,0.23056390438806,0.269272933229316,1.4124158349861,0,0.183195186803725,0,0,0.31396051279005,0,0.451191321234361,0.19606253431774,0.503464760927528,0,0,0,0,0.848118428603645,0.216388639742091,0,0,0,3.85477467284809,1.60633120630454,2.61054873763638,0,0,0.234264445725339,0,0.586993856796269,0,0,0,2.14250933141343,0.063186579628488,4.66002600184927,0.414752765588989,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0.0821154570532092,0,0,0,0.137041924646751,0.397429223405979,0.189932387867636,0,0.801588202515337,0.213452994739353,0.19980960958213,1.00863292007874,0.114536596165916,1.54435498075768,0.14405479798815,0.621262677827163,0.235694034616795,0.271808412147228,1.04602846312333,0.101998217636322,0,0,0.136905378891993,2.55493176133945,0,0.525774708558629,0,0,0,0,0,0,0.53746777989381,0,1.16495949527454,1.89079637537337,1.81314888438566,2.76354529802158,0.0984274815147488,0,0,0.136203406111576,2.73280352390533,4.95141971750042,3.32352270423348,0.2249738915515,0,0.485996453264197,0,0,0.472091293214983,0.739202355635845,0.35857467866569,0.575745591958336,0,0,0,0,0,0,0,0,0,0.79318464064088,0.732761168390412,2.65013777824443,0.387848869084652,0.26446520348538,0.171086837884329,0,0.106787412567695,0.314408610199332,0,0,0.395223263795889,0,0.638341257770182,0,0,0,0,0.785270481251171,0,0.488105059607853,0.500763722825999,0,0.110929051536852,0.0620964029413835,0,0,0.151649117541648,0,0.235265819698172,4.21501415226193,2.3187364577732,0,0.467426619694449,0,0.378806010550178,0.251567901752575,0.889811221596536,0,0.151230923763239,0.310874401165561,0.443565449968902,0.318593534327405,0,0.931577741257556,0,0,0,0.300515217994437,0,0,0.545545977607678,0.322231671127465,0,0,0.400027764663154,0.343395705182793,0,0,0,0.857766365499703,0.521988583930423,0,0,0,0,0,0.438568099157414,0.176689145945881,0,0.337884881306145,0,0,0,0.276516872303462,0,0,0,0.655219697692825,0,0,0.999936979274649,0,0,0,0,0,0,0.383683113910955,0.107824811396682,1.88719130227076,0.436838552768056,1.01839517972415,14.0299447267111,5.32923786313709,0,0,0.0788617450012534,1.60114149657094,0,0,0.192687675289379,0,0.159633859057151,0.615349092722265,6.04972070932123,0.96820153449905,0,0,0,0,0.183428598521679,1.15525666150338,0,2.7614397042404,0,0.0752103283492573,0,0,0,0,0.147856086217045,0.337687923091973,0.781078098613847,0.620060389503552,0.380494861163441,2.18789923607288,0,0,0.703484977438482,0,0,0,0,0,0.0887023701626388,0,0,0.271878931907327,0.789273282754189,0.472775363535873,0,0.156986185701028,0.314231179832004,0.280272163313789,1.82631744101899,0,0,0,0.47404083519818,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0.559277158988962,0.392600934460972,0,0,0,1.1598144313382,0,0.701818390386317,3.18321240258189,1.78380136166353,0.22589216407792,0.549702583727146,0.905777061400041,0,0.218559560503957,0,0,0.471353094203252,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,1.41994405973866,0.475940431336403,2.18175345170189,1.0580536810308,0,0,0,0.756998549010474,0.327796715891087,0.380095503034311,0.917899467677836,0.534434810531121,1.37842349302267,0,1.89446745545599,5.35928260312357,0,0.20686599172379,0,0.23806443146374,0.193766729508018,0.0620747142958579,0.224263725161227,0.0636471582781649,0,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0.89543595472072,0.853818767021724,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr17:7081473..7081500,- | |||
}} |
Revision as of 13:26, 20 January 2014
Short description: | p@chr17:7081473..7081500, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7081473..7081500, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data