FFCP PHASE1:Hg19::chr17:7386814..7386828,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C613 | |||
|description=CAGE_peak_at_chr17:7386814..7386828,+ | |||
|id=chr17:7386814..7386828,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.73e-33!140;CL:0002031!2.49e-29!124;CL:0000037!2.20e-27!172;CL:0000566!2.20e-27!172;CL:0002087!6.32e-27!119;CL:0000988!5.15e-26!182;CL:0002032!1.09e-23!165;CL:0000837!1.09e-23!165;CL:0002057!2.36e-22!42;CL:0000860!4.69e-20!45;CL:0000766!2.08e-16!76;CL:0000557!5.52e-16!71;CL:0000839!3.12e-15!70;CL:0002009!5.21e-14!65;CL:0002194!9.80e-13!63;CL:0000576!9.80e-13!63;CL:0000040!9.80e-13!63;CL:0000559!9.80e-13!63;CL:0000838!1.29e-12!52;CL:0000542!3.43e-12!53;CL:0000051!3.43e-12!53;CL:0000763!6.01e-12!112;CL:0000049!6.01e-12!112;CL:0000791!2.11e-10!18;CL:0000789!2.11e-10!18;CL:0002420!2.11e-10!18;CL:0002419!2.11e-10!18;CL:0000790!2.11e-10!18;CL:0002393!6.33e-10!9;CL:0002397!6.33e-10!9;CL:0000084!2.71e-09!25;CL:0000827!2.71e-09!25;CL:0000624!3.98e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.06e-17;3!CL:0000624;4.84e-14;6!CL:0000791;1.09e-13;18!CL:0000789;1.09e-13;18!CL:0002419;1.09e-13;18!CL:0000542;2.75e-13;53!CL:0000097;2.19e-10;5!CL:0000236;5.21e-10;13!CL:0000084;1.33e-09;25!CL:0002087;6.54e-09;104!CL:0000767;4.01e-08;3!CL:0000898;7.44e-08;3!CL:0000860;7.56e-07;33!CL:0002057;7.56e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.59e-29,136;CL:0002031,1.74e-26,120;CL:0000037,4.58e-24,168;CL:0002032,1.54e-23,161;CL:0000837,1.54e-23,161;CL:0000988,1.58e-22,177;CL:0000838,4.24e-20,52;CL:0000542,1.17e-19,53;CL:0000051,1.17e-19,53;CL:0002087,2.64e-19,115;CL:0000623,1.19e-17,3;CL:0000825,1.19e-17,3;CL:0000624,3.69e-14,6;CL:0000791,9.57e-14,18;CL:0000789,9.57e-14,18;CL:0002420,9.57e-14,18;CL:0002419,9.57e-14,18;CL:0000790,9.57e-14,18;CL:0000097,2.38e-10,5;CL:0002028,2.38e-10,5;CL:0000084,1.22e-09,25;CL:0000827,1.22e-09,25;CL:0000766,1.29e-09,72;CL:0000236,2.28e-09,14;CL:0000557,8.41e-09,67;CL:0000767,3.19e-08,3;CL:0000134,4.10e-08,354;CL:0000898,5.44e-08,3;CL:0002320,7.82e-08,361;CL:0000763,1.04e-07,108;CL:0000049,1.04e-07,108;CL:0000219,1.43e-07,386;CL:0000839,1.83e-07,66;CL:0000860,7.94e-07,42;CL:0002057,7.94e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000790;1.09e-13;18!CL:0000051;2.75e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.78e-15!102;UBERON:0003061!3.78e-15!102;UBERON:0002371!1.87e-14!80;UBERON:0002193!7.79e-14!112;UBERON:0001474!1.63e-12!86;UBERON:0002405!5.71e-12!115;UBERON:0004765!8.34e-09!101;UBERON:0001434!8.34e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.66e-07,76;UBERON:0002384,1.88e-07,371;UBERON:0002405,7.20e-07,93;UBERON:0001474,8.39e-07,82 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,1.96682138424452,0.767658796194425,2.01260960310899,0,0,0.369754010166788,0.0774672005803016,0,0.293600439334847,0.553995408531877,0.802177789880567,0.434021741431704,0,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,1.23350366406548,1.85823822537062,0.575384784644301,0.256160706529101,0.47296445977717,0,2.5819387343353,2.70852973188684,0.752969358170419,0,0.224723484445085,1.22433556948361,0.641858054152187,0.639337125799041,0.329851300186716,0,0,1.7412554317715,0,1.24564449799115,0.251248665256743,0.521482918420201,0.65156653411535,0.605399502633369,0,0,0.633765858935825,1.06302149982522,0.628975936525128,0.786300418025466,0.300353785683013,0,0.285012743741249,0.59675003159727,0.91332076882317,1.75996244461323,0,0,1.28019066769952,0,0,0,0,5.12291672198504,1.76171156811282,1.52909291250092,1.32171328579026,0,0.263384084775077,1.57367816091066,0.786021525498329,1.23360899399706,0.334372990781356,1.30368906653436,1.89379122293893,1.94826728407911,0.334231370655521,0.883817722424512,0.443067789167242,1.08321545506006,0.25618263945135,0.130059347559878,0,0.276350017785848,0,0.889719378972363,0.535081656179426,0,0.113309342697566,1.91610246800961,2.06176467289578,0.253019692019503,0.318565414324097,0,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0,2.01606743224732,2.40696176205157,2.46201486600758,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0.715471872916026,1.14398982156026,0.371457501329565,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0.365921118388786,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,1.24396869324463,2.45003920808834,2.39860623510122,0.063497894292169,0,1.17217447210047,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,2.1673383622212,3.66566877261179,3.59360501583295,0,0,0.773288812777695,0.167516265334349,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0.82707210449155,0.862856803274467,0.426910231213777,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0.586654148204409,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.275078873194468,0.415440338029185,0.2249738915515,1.5476039091159,0,0.670869375198532,0,0,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0.340776043570843,0.113312091520126,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0.138348634936231,0,0.303298235083296,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0.327609848846413,0,0,0.19998739585493,0.106691729694141,0,0,0.368211900503681,0,0,0,0,0.629063767423586,0,0,0,0.123935764259002,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0.467878926924211,0.795803100645473,0.118920090777569,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0.128915775947154,0.199882311849858,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0.454672189309436,2.41167717140561,0,0.103432995861895,0,0,0.0645889098360061,0.744896571550295,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr17:7386814..7386828,+ | |||
}} |
Revision as of 13:32, 20 January 2014
Short description: | p@chr17:7386814..7386828, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7386814..7386828, + |
Coexpression cluster: | C613_CD4_CD19_CD8_Natural_CD14_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.66e-07 | 76 |
connective tissue | 1.88e-07 | 371 |
immune system | 7.20e-07 | 93 |
bone element | 8.39e-07 | 82 |