FFCP PHASE1:Hg19::chr17:7492504..7492520,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6665 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11196 | |||
|TSSclassifier=strong | |||
|UniProt=O60248 | |||
|association_with_transcript=202bp_to_AJ006222_5end | |||
|coexpression_cluster_id=C3585 | |||
|description=CAGE_peak_3_at_SOX15_5end | |||
|id=chr17:7492504..7492520,- | |||
|ontology_enrichment_celltype=CL:0002159!2.01e-10!13;CL:0002076!3.80e-09!43;CL:0002077!1.06e-08!33;CL:0000066!1.31e-08!254;CL:0002368!6.58e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002159;6.03e-18;14!CL:0002368;1.65e-12;13!CL:0002328;2.22e-11;3!CL:0000362;1.65e-09;9!CL:0000240;2.18e-09;6!CL:0000311;2.18e-09;6!CL:0000079;2.18e-09;6!CL:0000237;2.18e-09;6!CL:0002076;5.03e-09;42!CL:0002077;9.07e-09;34!CL:0000317;3.59e-08;2!CL:1000448;3.59e-08;2!CL:0002308;3.59e-08;2!CL:0002140;3.59e-08;2!CL:0000244;4.06e-08;4!CL:0000731;4.06e-08;4!CL:0000575;1.06e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,5.60e-18,14;CL:0002368,1.59e-12,13;CL:0002328,1.92e-11,3;CL:0002076,3.72e-11,42;CL:0002077,1.62e-09,34;CL:0000362,1.79e-09,9;CL:0000240,2.84e-09,6;CL:0000311,2.84e-09,6;CL:0000079,2.84e-09,6;CL:0000237,2.84e-09,6;CL:0000036,2.84e-09,6;CL:0000357,2.84e-09,6;CL:0000114,2.84e-09,6;CL:0000244,3.01e-08,4;CL:0000731,3.01e-08,4;CL:0000317,3.20e-08,2;CL:1000448,3.20e-08,2;CL:0002308,3.20e-08,2;CL:0002140,3.20e-08,2;CL:0000575,1.41e-07,2;CL:0000066,1.82e-07,253;CL:0000223,2.94e-07,58;CL:0000076,4.37e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000357;2.18e-09;6!CL:0000114;2.18e-09;6!UBERON:0007297;1.45e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!1.76e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.38e-20!169;UBERON:0000924!6.09e-20!173;UBERON:0006601!6.09e-20!173;UBERON:0001049!1.11e-19!57;UBERON:0005068!1.11e-19!57;UBERON:0006241!1.11e-19!57;UBERON:0007135!1.11e-19!57;UBERON:0000153!2.72e-19!129;UBERON:0007811!2.72e-19!129;UBERON:0000033!7.61e-19!123;UBERON:0005743!9.24e-19!86;UBERON:0001017!9.80e-19!82;UBERON:0002020!7.90e-18!34;UBERON:0003528!7.90e-18!34;UBERON:0001893!9.07e-18!34;UBERON:0002791!2.59e-17!33;UBERON:0002780!3.70e-17!41;UBERON:0001890!3.70e-17!41;UBERON:0006240!3.70e-17!41;UBERON:0001869!8.15e-17!32;UBERON:0007023!9.63e-17!115;UBERON:0003080!1.66e-16!42;UBERON:0002616!4.01e-16!59;UBERON:0000073!1.94e-15!94;UBERON:0001016!1.94e-15!94;UBERON:0000955!1.28e-14!69;UBERON:0006238!1.28e-14!69;UBERON:0001950!4.24e-14!20;UBERON:0003075!5.95e-14!86;UBERON:0007284!5.95e-14!86;UBERON:0000956!7.51e-14!25;UBERON:0000203!7.51e-14!25;UBERON:0002619!8.15e-14!22;UBERON:0000064!1.06e-13!219;UBERON:0002346!2.21e-13!90;UBERON:0003056!3.44e-13!61;UBERON:0000062!1.11e-09!511;UBERON:0000922!4.55e-09!612;UBERON:0000468!2.06e-08!659;UBERON:0000161!4.11e-08!35;UBERON:0000475!1.74e-07!365;UBERON:0001004!2.51e-07!72;UBERON:0000467!3.72e-07!625;UBERON:0000480!4.46e-07!626;UBERON:0002050!8.39e-07!605;UBERON:0005423!8.39e-07!605;UBERON:0000166!8.92e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.21e-13;20!UBERON:0002619;8.64e-12;22!UBERON:0004815;2.22e-11;3!UBERON:0002031;2.22e-11;3!UBERON:0001869;1.06e-10;32!UBERON:0002791;2.50e-10;32!UBERON:0000956;3.34e-10;25!UBERON:0000203;3.34e-10;25!UBERON:0003528;1.60e-09;34!UBERON:0002020;1.60e-09;34!UBERON:0001893;2.38e-09;34!UBERON:0002419;3.59e-08;2!UBERON:0007771;3.59e-08;2!UBERON:0003297;3.59e-08;2!UBERON:0001821;3.59e-08;2!UBERON:0003487;3.59e-08;2!UBERON:0001820;3.59e-08;2!UBERON:0002780;9.60e-08;41!UBERON:0001890;9.60e-08;41!UBERON:0001871;1.48e-07;6!UBERON:0001876;3.27e-07;2!UBERON:0002185;5.82e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.81e-13,20;UBERON:0002619,5.99e-12,22;UBERON:0004815,1.92e-11,3;UBERON:0002031,1.92e-11,3;UBERON:0002791,3.38e-11,32;UBERON:0001869,3.38e-11,32;UBERON:0010371,2.00e-10,104;UBERON:0003528,2.06e-10,34;UBERON:0002020,2.06e-10,34;UBERON:0001893,2.06e-10,34;UBERON:0000956,2.43e-10,25;UBERON:0000203,2.43e-10,25;UBERON:0004121,4.46e-10,171;UBERON:0000924,4.46e-10,171;UBERON:0006601,4.46e-10,171;UBERON:0002780,8.79e-10,41;UBERON:0001890,8.79e-10,41;UBERON:0003080,8.79e-10,41;UBERON:0006240,8.79e-10,41;UBERON:0002419,3.20e-08,2;UBERON:0007771,3.20e-08,2;UBERON:0003297,3.20e-08,2;UBERON:0001821,3.20e-08,2;UBERON:0003487,3.20e-08,2;UBERON:0001820,3.20e-08,2;UBERON:0005089,3.20e-08,2;UBERON:0005088,3.20e-08,2;UBERON:0000073,3.21e-08,53;UBERON:0002616,3.21e-08,53;UBERON:0003056,5.32e-08,61;UBERON:0001017,6.14e-08,81;UBERON:0001871,8.53e-08,6;UBERON:0001876,1.20e-07,2;UBERON:0001049,1.24e-07,56;UBERON:0005068,1.24e-07,56;UBERON:0006241,1.24e-07,56;UBERON:0007135,1.24e-07,56;UBERON:0002185,5.35e-07,5;UBERON:0001016,8.81e-07,89 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,1.39560233594486,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,5.51652734687356,4.51808878167375,2.9580320813343,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0.425208599930087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0.087834785693126,0,1.09288586487763,4.82019775619758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0,0,0.245668634623536,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,0.272746120590835,1.72082757233402,0.731842236777572,0.662648841607426,0.69716365721711,0.414644220061482,1.00928340350251,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.220587945464788,0,0,0.269662616320329,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,5.81676512665715,1.1240175325762,3.41798506199545,2.03694579348765,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0.93733833986777,1.84780341018745,1.27597587518148,0.268675568108545,0.871901815541886,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,1.00509759200609,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0.116210378459959,0,12.8324140994102,8.56353197103836,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0,0,0,2.87132768998086,11.7010844286574,0,0,0,0,0,0,0.145016693914229,0,0,3.63626813794152,4.22818148203234,0,2.6301023022443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0.422215270595328,0,0,0,0.865999014529609,0.670302275535787,5.44454924306613,0.0941438007767792,2.58303223602738,1.68471475667626,2.66058092122005,0.229723400206959,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,1.9882952955326,1.68803299692615,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.371072392647405,1.99613798001194,0,0,0,1.0241410345695,0,0.472775363535873,0,0,0,0,1.08536794762867,0,0.995213339381022,0.886642856860642,1.31631238292384,0,0.83654246567162,0.538651809526579,0,0,0.269272933229316,0.325942115766024,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.22206028986725,0,0,0,0.134802265961354,0,0,0,0.391329237864179,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0.609414446062818,1.04836000945218,0,0,0,0,0.969890164884194,0,1.12990370390266,0,0,0.126621591911757,0.977756913674015,0,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0,0.858452096273142,0.223171457441873,0,0,0,0,0,0,0,0,0,0.408610218334727,0.482259445395058,0.687697182986169,2.07720169014593,0,0,0.182248669974074,0.670869375198532,0,0.0524545881349981,0,0,0.383830394638891,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,0,0.886068179966986,3.78281421196086,0.751145584238999,1.14681839138014,0.665574309221114,0.124192805882767,0,0,0,0.285465333544967,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0.179088841081487,0.308801447160972,0,0,0.38582807654183,1.52048196587765,0,0,0,0.553033744606923,0,0,0.163565394255844,0,0,0,0,0,0,0.567515953566836,0,0.699397538597222,1.86623178009892,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0.3062454773532,0.321146125482298,1.41696576325585,1.43670473151436,0.205116364240755,1.00828678488687,0.207471757392654,1.45328081068666,0,0.588886311006154,0,7.8874297364322,0.462102664601353,0,0,0,0.150420656698515,0,0,0.261906694481422,0,0,0.202612753855184,1.56215619722769,1.03343398250592,0.0634158101939068,1.64092442705466,0,0,0,0.127762427639595,0,0,1.21393120847326,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.157115589916002,0,1.82631744101899,0,0,0.142953088353313,0,0,0,0.801711364730253,0.207216164163037,0.51215543128185,0.691259661814092,0,0,0,2.11693525095465,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.785233868459781,0,0.8453114551668,0,0,0,0,0.178553938605658,1.05868461514708,0,0,0,0.286679166302903,0,0.271965960763659,0.872701380680755,0,0,0,0,0,0,0,1.1218771271618,0.26721740526556,0.643264296743914,0.752122617877125,0.0757786982182394,0.535928260312357,0.829169439458779,0.413731983447581,1.0661699095049,0.23806443146374,0.0645889098360061,0,0,0,0,2.83031772266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| |||
|short_description=p3@SOX15 | |||
}} |
Revision as of 13:35, 20 January 2014
Short description: | p3@SOX15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SOX15_5end |
Coexpression cluster: | C3585_Prostate_Sebocyte_oral_Small_Keratinocyte_Tracheal_Bronchial |
Association with transcript: | 202bp_to_AJ006222_5end |
EntrezGene: | SOX15 |
HGNC: | 11196 |
UniProt: | O60248 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 5.60e-18 | 14 |
respiratory epithelial cell | 1.59e-12 | 13 |
bronchial epithelial cell | 1.92e-11 | 3 |
endo-epithelial cell | 3.72e-11 | 42 |
ecto-epithelial cell | 1.62e-09 | 34 |
epidermal cell | 1.79e-09 | 9 |
stratified squamous epithelial cell | 2.84e-09 | 6 |
keratin accumulating cell | 2.84e-09 | 6 |
stratified epithelial cell | 2.84e-09 | 6 |
keratinizing barrier epithelial cell | 2.84e-09 | 6 |
epithelial fate stem cell | 2.84e-09 | 6 |
stratified epithelial stem cell | 2.84e-09 | 6 |
surface ectodermal cell | 2.84e-09 | 6 |
transitional epithelial cell | 3.01e-08 | 4 |
urothelial cell | 3.01e-08 | 4 |
sebum secreting cell | 3.20e-08 | 2 |
epithelial cell of sweat gland | 3.20e-08 | 2 |
epithelial cell of skin gland | 3.20e-08 | 2 |
acinar cell of sebaceous gland | 3.20e-08 | 2 |
corneal epithelial cell | 1.41e-07 | 2 |
epithelial cell | 1.82e-07 | 253 |
endodermal cell | 2.94e-07 | 58 |
squamous epithelial cell | 4.37e-07 | 63 |