FFCP PHASE1:Hg19::chr19:38916807..38916818,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115727 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18958 | |||
|TSSclassifier=strong | |||
|UniProt=C0LTP7,C0LTP6,C0LTP5,C0LTP2,Q8TDF6,C0LTP3,C0LTP4 | |||
|association_with_transcript=126bp_to_ENST00000293062,ENST00000405332,ENST00000426920,ENST00000433821,ENST00000454404,NM_001146202,NM_001146203,NM_001146204,NM_001146205,NM_001146206,NM_001146207,NM_170604,uc002oir.2,uc010egb.2,uc010xua.1,uc010xub.1,uc010xuc.1,uc010xud.1,uc010xue.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_RASGRP4_5end | |||
|id=chr19:38916807..38916818,- | |||
|ontology_enrichment_celltype=CL:0000763!6.31e-58!112;CL:0000049!6.31e-58!112;CL:0000766!2.35e-53!76;CL:0002057!1.57e-45!42;CL:0000037!2.60e-44!172;CL:0000566!2.60e-44!172;CL:0000557!2.97e-44!71;CL:0002032!4.38e-43!165;CL:0000837!4.38e-43!165;CL:0000860!1.82e-41!45;CL:0000839!1.92e-41!70;CL:0000988!3.19e-40!182;CL:0002009!2.50e-37!65;CL:0002194!2.64e-37!63;CL:0000576!2.64e-37!63;CL:0000040!2.64e-37!63;CL:0000559!2.64e-37!63;CL:0000738!2.43e-36!140;CL:0002031!5.23e-26!124;CL:0002087!2.70e-25!119;CL:0002393!3.07e-13!9;CL:0002397!3.07e-13!9;CL:0000094!6.96e-12!8;CL:0000081!4.79e-08!11;CL:0000134!6.84e-08!358;CL:0002274!9.93e-08!5;CL:0000457!9.93e-08!5;CL:0002191!9.93e-08!5;CL:0000097!9.93e-08!5;CL:0000831!9.93e-08!5;CL:0002028!9.93e-08!5;CL:0002320!2.54e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.27e-46;33!CL:0002057;2.27e-46;33!CL:0000576;7.55e-46;48!CL:0000766;4.34e-40;69!CL:0000473;2.00e-32;39!CL:0000234;2.00e-32;39!CL:0000763;1.59e-22;100!CL:0000094;5.64e-18;8!CL:0002393;5.93e-17;6!CL:0002397;5.93e-17;6!CL:0000097;1.00e-13;5!CL:0000081;9.84e-13;11!CL:0002087;2.61e-12;104!CL:0000738;1.36e-11;136!CL:0000775;2.94e-10;3!CL:0000875;1.02e-09;3!CL:0002396;1.02e-09;3!CL:0000988;4.77e-09;177!CL:0000226;1.22e-08;3!CL:0000842;1.22e-08;3!CL:0000163;1.85e-07;9!CL:0000771;2.24e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.30e-82,72;CL:0000860,1.07e-74,42;CL:0002057,1.07e-74,42;CL:0000763,1.27e-68,108;CL:0000049,1.27e-68,108;CL:0000557,5.68e-66,67;CL:0000473,4.38e-64,48;CL:0000234,4.38e-64,48;CL:0000839,5.58e-64,66;CL:0002194,3.65e-55,59;CL:0000576,3.65e-55,59;CL:0000040,3.65e-55,59;CL:0000559,3.65e-55,59;CL:0002009,4.82e-53,61;CL:0000037,1.95e-46,168;CL:0000738,1.24e-45,136;CL:0000988,2.42e-43,177;CL:0002032,2.54e-43,161;CL:0000837,2.54e-43,161;CL:0002031,5.57e-32,120;CL:0002087,4.07e-30,115;CL:0002393,6.11e-25,9;CL:0002397,6.11e-25,9;CL:0000094,5.53e-18,8;CL:0000134,1.93e-14,354;CL:0000097,6.58e-14,5;CL:0002028,6.58e-14,5;CL:0002320,6.98e-14,361;CL:0000081,9.70e-13,11;CL:0000219,6.33e-12,386;CL:0000775,2.94e-10,3;CL:0000875,9.75e-10,3;CL:0002396,9.75e-10,3;CL:0000048,1.51e-09,427;CL:0000723,3.19e-09,433;CL:0000226,7.95e-09,3;CL:0000842,7.95e-09,3;CL:0000034,8.39e-09,441;CL:0000163,1.48e-07,9;CL:0000771,2.24e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-53;42!CL:0000049;5.23e-18;108 | |||
|ontology_enrichment_disease=DOID:8692!1.86e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.64e-51!102;UBERON:0003061!5.64e-51!102;UBERON:0002193!3.89e-47!112;UBERON:0002371!9.29e-39!80;UBERON:0001474!1.04e-34!86;UBERON:0002405!9.18e-28!115;UBERON:0004765!9.36e-27!101;UBERON:0001434!9.36e-27!101;UBERON:0003081!1.94e-16!216;UBERON:0000178!3.50e-13!15;UBERON:0000179!3.50e-13!15;UBERON:0000463!3.50e-13!15;UBERON:0002204!1.13e-10!167;UBERON:0007023!1.89e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.98e-26;15!UBERON:0000179;4.98e-26;15!UBERON:0000463;4.98e-26;15!UBERON:0002390;6.17e-14;32!UBERON:0002193;1.73e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.40e-77,98;UBERON:0003061,1.40e-77,98;UBERON:0002193,8.07e-72,108;UBERON:0002371,7.26e-57,76;UBERON:0001474,6.79e-52,82;UBERON:0002405,5.28e-49,93;UBERON:0004765,2.74e-46,90;UBERON:0001434,1.55e-40,100;UBERON:0003081,2.54e-30,203;UBERON:0000178,3.43e-26,15;UBERON:0000179,3.43e-26,15;UBERON:0000463,3.43e-26,15;UBERON:0002204,9.06e-20,167;UBERON:0000926,1.25e-14,315;UBERON:0004120,1.25e-14,315;UBERON:0006603,1.25e-14,315;UBERON:0002384,4.01e-13,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0.383829398097213,3.71558695958582,0,0,0,0,0,0,3.32397245119126,2.80762226458198,3.03815219002193,1.11957737119962,1.6194683300949,0.77272670290256,5.08893835728477,2.64513160582167,3.88134497900506,4.64858073811369,0.411167888021826,1.85823822537062,1.1507695692886,0.768482119587302,1.89185783910868,1.03423704220986,1.29096936716765,1.35426486594342,2.25890807451126,1.91034305040492,1.34834090667051,3.67300670845083,1.92557416245656,0,2.63881040149373,1.59570926097305,3.83602275479425,3.19230162491442,0.56738522469114,0.622822248995575,2.00998932205395,0,1.08594422352558,3.02699751316684,1.84138817993782,2.21523671208619,6.5489138756702,7.01594189884644,5.45112478321777,4.38081661471331,3.60424542819615,4.66104201421532,7.98035682475496,7.55883373356542,5.29726045917438,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.512365278902701,1.1705341280389,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0.451725357233318,0.127986611154418,0,0.710331756132051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.038279312852,31.022421131866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0,4.92663237895944,6.95582628704486,2.48793738648926,2.88239906833923,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,32.2073020297288,17.9496875522415,33.1532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3082884179662,1.94142780736755,2.98837161849644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,14.2085330585007,19.1159301785594,14.8108268665282,7.86164859010704,9.04997000789627,12.9694662238543,11.3406601820004,5.55187623405989,0,0,0,0.185803175125719,0,0,0,0.59873811429845,1.7235483311913,9.10196405712696,0.324621940274555,0,0.228234679033192,0,0,1.69291777801603,0.321176150207399,0.403599414382095,1.27753871307098,1.71752672377882,0,0,0.166849141711909,0.976940477010201,0,0,4.05683517713975,0.66614393599564,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0.615424027305347,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.997270091400938,0,0,0,0,0.476809736941136,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,1.27746588066972,0,2.10309883423452,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0.449947783103001,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0.662091970365432,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0.79339561045614,0,0,0.106787412567695,0.157204305099666,2.48543433208317,1.48849806543585,0,0.121792598380896,0,0,0,0,0,0,0,0,0.3755727921195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,1.92045113449454,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0.203909198930495,0,0,0,0.156986185701028,0.628462359664008,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0.845855261818682,1.22469987149797,0,0,0,0,0,0,0.716697915757256,0,0,0,0.5290268405154,0,0,0,0,0.109265571963696,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0.645499848534087,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@RASGRP4 | |||
}} |
Revision as of 23:07, 20 January 2014
Short description: | p2@RASGRP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RASGRP4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 126bp_to_ENST00000293062, ENST00000405332, ENST00000426920, ENST00000433821, ENST00000454404, NM_001146202, NM_001146203, NM_001146204, NM_001146205, NM_001146206, NM_001146207, NM_170604, uc002oir.2, uc010egb.2, uc010xua.1, uc010xub.1, uc010xuc.1, uc010xud.1, uc010xue.1_5end |
EntrezGene: | RASGRP4 |
HGNC: | 18958 |
UniProt: | C0LTP7C0LTP6C0LTP5C0LTP2Q8TDF6C0LTP3C0LTP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.40e-77 | 98 |
blood island | 1.40e-77 | 98 |
hemolymphoid system | 8.07e-72 | 108 |
bone marrow | 7.26e-57 | 76 |
bone element | 6.79e-52 | 82 |
immune system | 5.28e-49 | 93 |
skeletal element | 2.74e-46 | 90 |
skeletal system | 1.55e-40 | 100 |
lateral plate mesoderm | 2.54e-30 | 203 |
blood | 3.43e-26 | 15 |
haemolymphatic fluid | 3.43e-26 | 15 |
organism substance | 3.43e-26 | 15 |
musculoskeletal system | 9.06e-20 | 167 |
mesoderm | 1.25e-14 | 315 |
mesoderm-derived structure | 1.25e-14 | 315 |
presumptive mesoderm | 1.25e-14 | 315 |
connective tissue | 4.01e-13 | 371 |