FFCP PHASE1:Hg19::chr2:182322231..182322262,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3676 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6140 | |||
|TSSclassifier=strong | |||
|UniProt=E7EP60 | |||
|association_with_transcript=76bp_to_ENST00000233573_5end | |||
|coexpression_cluster_id=C4155 | |||
|description=CAGE_peak_2_at_ITGA4_5end | |||
|id=chr2:182322231..182322262,+ | |||
|ontology_enrichment_celltype=CL:0000048!7.21e-48!430;CL:0000723!5.15e-46!436;CL:0000034!6.11e-46!444;CL:0000037!1.06e-43!172;CL:0000566!1.06e-43!172;CL:0000988!1.49e-41!182;CL:0000134!2.27e-41!358;CL:0002320!2.36e-41!365;CL:0002032!3.61e-40!165;CL:0000837!3.61e-40!165;CL:0000219!5.74e-35!390;CL:0000738!5.86e-35!140;CL:0002087!2.87e-30!119;CL:0000763!6.72e-29!112;CL:0000049!6.72e-29!112;CL:0002031!5.66e-28!124;CL:0000766!1.47e-22!76;CL:0002057!9.17e-21!42;CL:0000839!3.84e-19!70;CL:0000557!3.86e-19!71;CL:0002194!5.61e-19!63;CL:0000576!5.61e-19!63;CL:0000040!5.61e-19!63;CL:0000559!5.61e-19!63;CL:0002371!1.59e-18!591;CL:0002009!9.60e-18!65;CL:0000860!3.96e-17!45;CL:0000144!9.66e-15!625;CL:0000542!4.08e-10!53;CL:0000051!4.08e-10!53;CL:0000838!4.36e-10!52;CL:0000003!5.15e-08!722;CL:0002393!4.02e-07!9;CL:0002397!4.02e-07!9;CL:0000057!8.32e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000576;8.00e-15;48!CL:0000860;2.27e-14;33!CL:0002057;2.27e-14;33!CL:0000473;4.11e-13;39!CL:0000234;4.11e-13;39!CL:0000766;2.29e-12;69!CL:0000763;9.10e-12;100!CL:0002087;4.98e-10;104!CL:0000738;7.54e-09;136!CL:0000988;3.96e-08;177!CL:0002620;7.73e-07;23!CL:0000542;8.43e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.25e-50,427;CL:0000037,8.33e-49,168;CL:0000723,9.50e-49,433;CL:0000034,2.07e-48,441;CL:0000988,1.87e-46,177;CL:0002032,4.81e-45,161;CL:0000837,4.81e-45,161;CL:0000134,1.52e-44,354;CL:0002320,1.65e-44,361;CL:0000738,2.45e-39,136;CL:0000219,1.32e-37,386;CL:0002087,2.31e-34,115;CL:0000763,3.16e-33,108;CL:0000049,3.16e-33,108;CL:0002031,6.91e-32,120;CL:0000766,1.89e-26,72;CL:0000557,7.57e-23,67;CL:0002194,8.91e-23,59;CL:0000576,8.91e-23,59;CL:0000040,8.91e-23,59;CL:0000559,8.91e-23,59;CL:0000839,9.90e-23,66;CL:0000473,3.11e-22,48;CL:0000234,3.11e-22,48;CL:0000860,1.75e-21,42;CL:0002057,1.75e-21,42;CL:0002009,1.98e-21,61;CL:0000542,1.27e-10,53;CL:0000051,1.27e-10,53;CL:0000838,1.36e-10,52;CL:0002393,2.48e-07,9;CL:0002397,2.48e-07,9;CL:0002620,7.98e-07,23;CL:0000057,9.79e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;9.90e-16;42!CL:0000049;2.12e-10;108!CL:0000051;8.43e-07;53 | |||
|ontology_enrichment_disease=DOID:8692!1.52e-08!31;DOID:2531!2.68e-08!51;DOID:0060083!2.68e-08!51;DOID:1240!8.41e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.08e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.07e-09,31;DOID:2531,4.59e-09,51;DOID:0060083,4.59e-09,51;DOID:1240,1.60e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.00e-40!375;UBERON:0002390!1.30e-27!102;UBERON:0003061!1.30e-27!102;UBERON:0002193!1.58e-26!112;UBERON:0002371!1.82e-19!80;UBERON:0001474!2.26e-19!86;UBERON:0002204!2.90e-17!167;UBERON:0004765!1.18e-14!101;UBERON:0001434!1.18e-14!101;UBERON:0002405!1.87e-13!115;UBERON:0003081!3.85e-13!216;UBERON:0000178!1.77e-07!15;UBERON:0000179!1.77e-07!15;UBERON:0000463!1.77e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;4.41e-08;32!UBERON:0000178;1.20e-07;15!UBERON:0000179;1.20e-07;15!UBERON:0000463;1.20e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.56e-43,371;UBERON:0002390,1.74e-31,98;UBERON:0003061,1.74e-31,98;UBERON:0002193,6.34e-30,108;UBERON:0002405,2.48e-23,93;UBERON:0002371,7.90e-23,76;UBERON:0001474,1.01e-22,82;UBERON:0004765,5.72e-20,90;UBERON:0002204,1.23e-18,167;UBERON:0001434,8.43e-17,100;UBERON:0003081,1.34e-14,203;UBERON:0000926,8.35e-11,315;UBERON:0004120,8.35e-11,315;UBERON:0006603,8.35e-11,315;UBERON:0000178,1.06e-07,15;UBERON:0000179,1.06e-07,15;UBERON:0000463,1.06e-07,15 | |||
|phase1_expression=26.5250433735013,16.0575392918237,12.9678051768293,21.0153926541574,10.2801051718276,6.10636966870258,2.53299878168311,1.89515962028049,2.61185628199839,0.737201809504527,0,0,0,3.83675694176145,2.98257638155124,11.4295274896802,10.2458069764076,12.4152715365853,10.7345215733912,1.84681587115182,1.83600622119828,1.25381888591235,3.72106783270374,1.77936752594749,7.53255837568817,4.89045796786888,5.50073949314637,6.76912719297642,16.521299627654,17.2723229143746,18.5779347979291,0,0.90361775633475,0,8.59885926441348,8.81449241422014,31.7088474481635,21.0518255242113,18.8511780621933,29.9475001587876,13.8827594028753,8.74512898251245,8.24241816429397,15.1214168330747,17.3822934096852,14.7976277324568,18.1294648786434,9.45686142450199,13.3173739484895,25.8923153089935,17.4189280439788,26.9589742072987,25.5111803745098,16.1371170895957,33.8566216485854,18.8242339542605,13.0994952027766,13.4834090667051,14.3859429414324,20.2185287057939,17.2621023965741,40.9015612231528,22.738856968866,31.5406315394194,14.8006711700578,9.07816359505824,12.4564449799115,24.8736178604176,18.251902144707,22.8048286940372,16.9511860737343,14.7311054395026,15.5066569846033,60.2077565989034,55.4897222908764,54.3015891866694,34.93420428656,44.6025371739274,51.4321877430656,34.4865419926911,52.5140027805598,56.6258876670365,19.3595868907455,27.3069305631066,24.016749854316,20.4830506831923,16.0158394814405,20.1163353984069,23.1365705474702,21.9432363543134,8.53819453664173,11.7447437874188,10.7036503875064,25.1125524300149,14.5732226375199,23.4411835449819,4.91774425284583,5.89516144123747,6.5792479679843,18.8920739791466,4.88883399950386,4.73447805734733,9.74133642039557,28.5210769626044,4.12448270464772,5.53834736459053,7.85331204918545,14.602410448727,19.6389614815416,30.0921365424727,35.9255023121603,30.7191270879156,6.3763222159686,7.49114318651197,15.6803285707465,36.7122270340114,16.4784812248826,12.7142154828573,24.0368707418528,14.0168782302603,22.1368374311182,8.55406840003537,20.7793664327326,21.2457774516335,17.4903017173284,17.2847393992132,18.8859439291841,12.9028315663829,10.1627274397733,9.84805946403033,12.1903433156981,9.38981203585091,7.41602858692476,0.722878304769133,1.00267582127178,0.434539556882471,0.795285947051099,0.486634870302636,4.82127567536746,5.76496433402666,6.58760892698445,1.70272798147026,0.364295288292542,0.370784442784429,6.49094787309367,7.13931922926996,4.65352861816028,15.9788718284579,18.8758320557442,12.2580975438756,0.198762407366705,2.58070378531837,0.347140501607594,0.56530794192401,0,0,1.04497483268405,0.516833518338658,2.84613010149368,2.34304428935269,0.805658634218294,0,0.24406205754817,0,0,2.32179293538607,1.12264686313085,1.35133776579987,1.53316637465883,0,0.916008719652036,9.22462922052443,11.6334079244498,1.3082821564276,13.4182426957736,2.40597972162702,3.83986624358335,10.6129549677061,5.67469411517371,1.12135520028461,16.0123493594557,5.92002116201184,9.33633106199299,13.3363565348991,17.9808093424805,7.56787138224657,11.5235184896,2.57753575017176,9.67696238173994,4.56377457235559,9.26581819421167,11.3911463684452,8.41739310714284,8.14614678873041,8.16616685019573,5.89604723096486,7.74943358818241,3.56400857184616,0.989067717114227,2.73048408581408,7.18618141816238,5.72342787443825,5.38009635449446,13.576141658725,2.63386572528503,0.919463387397059,2.70428506031874,27.5640205078851,17.5801842975085,10.4643120521098,14.6233011800098,28.2085630319338,25.350922192656,11.3361837620077,13.4004136558745,23.459910181536,6.62571635096151,14.1362913576704,14.8200336814102,13.2549766591426,24.1406522911298,12.7955164749103,4.91725717700414,0.193260853163297,0.272746120590835,0,0.365921118388786,0.265059536642971,0.580969714347592,1.24393266018445,0,1.09493207722749,9.38697193978896,9.64861407289328,6.90674606762403,7.42988684851167,6.49691533502627,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0.738155454624648,4.20725321410337,2.057870056657,2.94017422771084,0,0.982827216677626,1.77236972004421,12.8024298830249,0,8.7499583252248,2.52425656439839,0,1.10581869652794,2.03694579348765,0.977424915930974,2.07986957055916,8.6598805215164,1.62302566965108,27.5910431454181,7.36268883581476,3.70388410061289,8.37118269832232,0,0,24.1292665965649,2.10603838625314,12.6336487945419,0,0.16798212819886,0.283550194484773,0.358234090811393,0.871901815541886,2.68367875415648,8.37527504423104,9.50923087342841,7.46381215946779,10.8089965062721,13.3816979431963,0.253991577168676,0.381988425558278,3.51652341630141,0,5.65551209868279,0,3.71574362419752,3.81245686774226,9.59112151433216,7.99387315448355,27.0177885933756,3.57656445851882,11.834238535784,35.6357076223726,35.3625285498645,3.34369586540785,4.25547396069835,4.79559922228979,2.00169191121407,1.62786481617433,1.64648067356154,14.3323921089243,0.710783897485092,9.50342247520115,3.91871190177462,6.97226766880235,1.49959486773086,8.51366464488333,18.0812552915566,8.43335757932127,0.479249710983165,1.14861935834114,7.13184525203592,3.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| |||
|short_description=p2@ITGA4 | |||
}} |
Revision as of 07:20, 21 January 2014
Short description: | p2@ITGA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ITGA4_5end |
Coexpression cluster: | C4155_granulocyte_CD14_CD14CD16_acute_CD4_Preadipocyte_CD133 |
Association with transcript: | 76bp_to_ENST00000233573_5end |
EntrezGene: | ITGA4 |
HGNC: | 6140 |
UniProt: | E7EP60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.56e-43 | 371 |
hematopoietic system | 1.74e-31 | 98 |
blood island | 1.74e-31 | 98 |
hemolymphoid system | 6.34e-30 | 108 |
immune system | 2.48e-23 | 93 |
bone marrow | 7.90e-23 | 76 |
bone element | 1.01e-22 | 82 |
skeletal element | 5.72e-20 | 90 |
musculoskeletal system | 1.23e-18 | 167 |
skeletal system | 8.43e-17 | 100 |
lateral plate mesoderm | 1.34e-14 | 203 |
mesoderm | 8.35e-11 | 315 |
mesoderm-derived structure | 8.35e-11 | 315 |
presumptive mesoderm | 8.35e-11 | 315 |
blood | 1.06e-07 | 15 |
haemolymphatic fluid | 1.06e-07 | 15 |
organism substance | 1.06e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.07e-09 | 31 |
hematologic cancer | 4.59e-09 | 51 |
immune system cancer | 4.59e-09 | 51 |
leukemia | 1.60e-08 | 39 |