FFCP PHASE1:Hg19::chr3:13921455..13921496,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7476 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12786 | |||
|TSSclassifier=strong | |||
|UniProt=O00755 | |||
|association_with_transcript=121bp_to_ENST00000285018,NM_004625,uc003bye.1_5end | |||
|coexpression_cluster_id=C1269 | |||
|description=CAGE_peak_2_at_WNT7A_5end | |||
|id=chr3:13921455..13921496,- | |||
|ontology_enrichment_celltype=CL:0002076!6.01e-13!43;CL:0000223!1.10e-08!59;CL:0002159!1.10e-08!13;CL:0000066!1.38e-08!254;CL:0002368!3.50e-08!13;CL:0000791!7.93e-08!18;CL:0000789!7.93e-08!18;CL:0002420!7.93e-08!18;CL:0002419!7.93e-08!18;CL:0000790!7.93e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002159;3.21e-11;14!CL:0002076;2.59e-10;42!CL:0002368;1.83e-08;13!CL:1000507;4.28e-08;10!CL:1000494;4.28e-08;10!CL:0000244;9.40e-08;4!CL:0000731;9.40e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.04e-13,42;CL:0002159,3.19e-11,14;CL:0000223,2.19e-09,58;CL:0000066,5.99e-09,253;CL:0002368,1.79e-08,13;CL:1000507,3.53e-08,10;CL:1000494,3.53e-08,10;CL:0000244,9.37e-08,4;CL:0000731,9.37e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.10e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.27e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.46e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.98e-19!57;UBERON:0005068!5.98e-19!57;UBERON:0006241!5.98e-19!57;UBERON:0007135!5.98e-19!57;UBERON:0001893!3.95e-16!34;UBERON:0001017!4.12e-16!82;UBERON:0002020!6.77e-16!34;UBERON:0003528!6.77e-16!34;UBERON:0002616!1.56e-15!59;UBERON:0001869!2.35e-15!32;UBERON:0002791!2.52e-15!33;UBERON:0000064!7.16e-15!219;UBERON:0005743!1.36e-14!86;UBERON:0000955!7.69e-14!69;UBERON:0006238!7.69e-14!69;UBERON:0002780!9.74e-14!41;UBERON:0001890!9.74e-14!41;UBERON:0006240!9.74e-14!41;UBERON:0004121!2.15e-13!169;UBERON:0003080!3.61e-13!42;UBERON:0002619!4.49e-13!22;UBERON:0000924!5.29e-13!173;UBERON:0006601!5.29e-13!173;UBERON:0000956!1.05e-12!25;UBERON:0000203!1.05e-12!25;UBERON:0007023!1.62e-12!115;UBERON:0001950!4.88e-12!20;UBERON:0000033!9.30e-12!123;UBERON:0000073!1.05e-11!94;UBERON:0001016!1.05e-11!94;UBERON:0000153!1.92e-11!129;UBERON:0007811!1.92e-11!129;UBERON:0003075!2.73e-11!86;UBERON:0007284!2.73e-11!86;UBERON:0002346!1.08e-10!90;UBERON:0003056!2.96e-08!61;UBERON:0003076!3.73e-07!15;UBERON:0003057!3.73e-07!15;UBERON:0000365!6.60e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.16e-15;20!UBERON:0002619;2.98e-15;22!UBERON:0000956;7.00e-13;25!UBERON:0000203;7.00e-13;25!UBERON:0001869;1.39e-12;32!UBERON:0002791;1.29e-11;32!UBERON:0001893;1.50e-11;34!UBERON:0003528;6.23e-11;34!UBERON:0002020;6.23e-11;34!UBERON:0000365;2.77e-09;5!UBERON:0005631;1.75e-08;10!UBERON:0000158;1.75e-08;10!UBERON:0000486;1.75e-08;12!UBERON:0002780;2.71e-08;41!UBERON:0001890;2.71e-08;41!UBERON:0004211;4.28e-08;10!UBERON:0009773;4.28e-08;10!UBERON:0001231;4.28e-08;10!UBERON:0004810;4.28e-08;10!UBERON:0005910;1.37e-07;6!UBERON:0002021;6.35e-07;5!UBERON:0006554;8.92e-07;30!UBERON:0001008;8.92e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.23e-15,20;UBERON:0002619,1.49e-15,22;UBERON:0001869,1.13e-14,32;UBERON:0001893,1.84e-13,34;UBERON:0003528,3.10e-13,34;UBERON:0002020,3.10e-13,34;UBERON:0000956,3.86e-13,25;UBERON:0000203,3.86e-13,25;UBERON:0002791,4.82e-13,32;UBERON:0002780,3.30e-11,41;UBERON:0001890,3.30e-11,41;UBERON:0003080,3.30e-11,41;UBERON:0006240,3.30e-11,41;UBERON:0010371,7.50e-11,104;UBERON:0001049,8.12e-11,56;UBERON:0005068,8.12e-11,56;UBERON:0006241,8.12e-11,56;UBERON:0007135,8.12e-11,56;UBERON:0001017,2.30e-10,81;UBERON:0000073,8.13e-10,53;UBERON:0002616,8.13e-10,53;UBERON:0004121,1.40e-09,171;UBERON:0000924,1.40e-09,171;UBERON:0006601,1.40e-09,171;UBERON:0000365,2.77e-09,5;UBERON:0001016,1.84e-08,89;UBERON:0004810,3.53e-08,10;UBERON:0000955,1.07e-07,68;UBERON:0006238,1.07e-07,68;UBERON:0005910,1.37e-07,6;UBERON:0003056,3.30e-07,61;UBERON:0002021,4.17e-07,5;UBERON:0005631,4.83e-07,14;UBERON:0000158,4.83e-07,14 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.491467873003018,3.48900583986214,1.31064823278103,3.16520373874144,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0.786728553697808,0,0.154816123316076,14.7107395916628,9.93979531968225,3.32778609150109,0,0,0,0,0.401088894940283,0.868043482863407,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.09800287352883,3.93010762749165,8.22405995998037,0,1.30368906653436,2.36723902867367,3.89653456815823,0,0,0.443067789167242,0,0,0,0.164437904603676,0,0,5.04174314751005,4.81573490561484,10.4535523804977,0.113309342697566,2.29932296161153,3.09264700934367,1.77113784413652,2.22995790026868,1.30216690771284,0.950452044448374,1.05402583354441,0.639933055772092,0,1.65744076430812,0.821127996921047,2.01606743224732,0.267440195783507,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,13.4789256668241,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4608682530637,20.7287051649034,14.0534251740612,0,0,0,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,4.49976170175365,7.86812272803337,7.84125984810721,4.0738915869753,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,6.56136837907439,9.40699917913613,12.7597587518148,0.806026704325635,4.65014301622339,8.81780162079986,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97030760201927,1.2937654491571,2.31017465303547,0,2.60279707715243,3.86644406388848,5.02548796003046,2.55175500661265,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,1.44737618286021,0.862856803274467,1.49418580924822,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8349464509267,3.31491560169227,0,0,0,4.96319574198153,3.38867483259425,3.13739907670742,2.92278449306521,2.53323909342902,0,0,0,0,0,0.501689773854853,8.15604073744123,14.1282921517883,1.56712328305525,0,0,0,0,0,1.64865618636356,0,0,1.72279661398852,7.15066270640173,0,0,0,0,0,0,0,0,0,5.2891172915513,5.18913181885787,3.44554323735377,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96577098898175,6.70302275535787,13.0669181833587,1.7887322147588,22.8167847515752,26.9554361068201,13.7463347596369,17.229255015522,0.507447609232169,0.764637207142375,0,0.952927101831156,0.822724546172388,0.648473311192717,1.08006287447623,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4147132063599,3.26661148915902,4.60741053148848,0.994147647766298,2.53204949538923,0,0,0,0,0.276283915531148,0,0,0,0,0.898683511473268,0.179021174675609,0,0.0986434056369336,0,0,6.78532922266653,0.927680981618513,15.9691038400955,0,0,0,2.38966241399549,0,0.236387681767936,0,0,0,0,1.20596438625408,1.52581736317083,0.774054819518572,0.886642856860642,2.63262476584767,0,1.11538995422883,0.153900517007594,0,0.922255617552241,1.6156375993759,4.12860013303631,9.25103363222567,3.84709892287822,8.52855641629816,0,0,0.166211681900156,0,0,0,0,0,0,28.8922070441691,0,0,0,0.0884575645033392,0,0,0,0,0.808813595768125,0,1.40558667435203,0,1.56531695145672,0,0,0,6.73360075587078,0.126373159256976,0,0,0,0,0.313932918407225,0,0.284609546029793,0,11.975621945124,1.17590876897253,2.26353937109047,0,0,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,4.43175571691151,1.36885967914362,0.561111741760736,4.0556069000477,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,1.79711100449092,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.77064427945048,0,0,0,0,0,3.28047605953333,1.34173875039706,0,0,0.105600336519406,0,4.60596473566669,0,0,0,0,0,0,0,0.656740165994712,0,0,0,0,1.68067843270016,0.66116300871345,0,0,1.38823636338003,0.78602152549833,1.65695622138878,0.496166021811951,0,0,1.27668251554036,0,0,0,0,0,0,2.56255156294123,2.253436752717,0.573409195690071,0.665574309221114,1.36612086471044,0,0,0,0,0.235265819698172,0,2.17381542916238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,1.59020231351293,0,0,0,0,0,1.7973596699725,0,0,0,0,0,7.18461219419332,0,0,0,0,0,2.65771064666944,1.24415452006595,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,3.72529505559465,1.41696576325585,1.91560630868582,4.71767637753736,8.57043767153842,4.70269316756682,2.58361033010962,0,1.07962490351128,0.11796972334774,2.38457178078183,0.462102664601353,0,0,0,0.0752103283492573,0,0,1.04762677792569,0.49131575253029,0,5.13285643099799,0,2.06686796501184,4.81960157473692,14.2213450344737,0,0,0,3.44958554626907,0,0,0,0,4.16901139764402,0,0,0.883606528698812,4.86718524365083,0,3.44817345865414,0.235479278551542,2.04250266890802,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423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| |||
|short_description=p2@WNT7A | |||
}} |
Revision as of 17:31, 21 January 2014
Short description: | p2@WNT7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_WNT7A_5end |
Coexpression cluster: | C1269_serous_Urothelial_clear_Gingival_Renal_choriocarcinoma_Corneal |
Association with transcript: | 121bp_to_ENST00000285018, NM_004625, uc003bye.1_5end |
EntrezGene: | WNT7A |
HGNC: | 12786 |
UniProt: | O00755 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.04e-13 | 42 |
general ecto-epithelial cell | 3.19e-11 | 14 |
endodermal cell | 2.19e-09 | 58 |
epithelial cell | 5.99e-09 | 253 |
respiratory epithelial cell | 1.79e-08 | 13 |
kidney tubule cell | 3.53e-08 | 10 |
nephron tubule epithelial cell | 3.53e-08 | 10 |
transitional epithelial cell | 9.37e-08 | 4 |
urothelial cell | 9.37e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
neocortex | 1.23e-15 | 20 |
regional part of cerebral cortex | 1.49e-15 | 22 |
cerebral hemisphere | 1.13e-14 | 32 |
telencephalon | 1.84e-13 | 34 |
brain grey matter | 3.10e-13 | 34 |
gray matter | 3.10e-13 | 34 |
cerebral cortex | 3.86e-13 | 25 |
pallium | 3.86e-13 | 25 |
regional part of telencephalon | 4.82e-13 | 32 |
regional part of forebrain | 3.30e-11 | 41 |
forebrain | 3.30e-11 | 41 |
anterior neural tube | 3.30e-11 | 41 |
future forebrain | 3.30e-11 | 41 |
ecto-epithelium | 7.50e-11 | 104 |
neural tube | 8.12e-11 | 56 |
neural rod | 8.12e-11 | 56 |
future spinal cord | 8.12e-11 | 56 |
neural keel | 8.12e-11 | 56 |
central nervous system | 2.30e-10 | 81 |
regional part of nervous system | 8.13e-10 | 53 |
regional part of brain | 8.13e-10 | 53 |
ectoderm-derived structure | 1.40e-09 | 171 |
ectoderm | 1.40e-09 | 171 |
presumptive ectoderm | 1.40e-09 | 171 |
urothelium | 2.77e-09 | 5 |
nervous system | 1.84e-08 | 89 |
nephron tubule epithelium | 3.53e-08 | 10 |
brain | 1.07e-07 | 68 |
future brain | 1.07e-07 | 68 |
transitional epithelium | 1.37e-07 | 6 |
pre-chordal neural plate | 3.30e-07 | 61 |
occipital lobe | 4.17e-07 | 5 |
extraembryonic membrane | 4.83e-07 | 14 |
membranous layer | 4.83e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.46e-07 | 14 |