FFCP PHASE1:Hg19::chr3:52864680..52864695,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3700 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6169 | |||
|TSSclassifier=weak | |||
|UniProt=E9PGN5,B7ZKJ8,F5H194 | |||
|association_with_transcript=0bp_to_ENST00000406595,ENST00000485816,ENST00000538421,uc003dfz.2,uc011bem.1,uc011ben.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_ITIH4_5end | |||
|id=chr3:52864680..52864695,- | |||
|ontology_enrichment_celltype=CL:0000181!2.98e-12!12;CL:0000417!2.98e-12!12;CL:0000668!2.98e-12!12;CL:0000414!2.98e-12!12;CL:0000412!2.98e-12!12;CL:0000182!2.98e-12!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.44e-23;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.80e-23,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.21e-19;11!UBERON:0009497;6.90e-16;13!UBERON:0003104;1.24e-13;31!UBERON:0010226;5.18e-07;1!UBERON:0005425;5.18e-07;1!UBERON:0004874;5.18e-07;1!UBERON:0005062;6.99e-07;4!UBERON:0007284;6.99e-07;4 | |||
|ontology_enrichment_disease=DOID:7!7.46e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:114;1.29e-12;2!DOID:178;5.18e-07;1!DOID:326;5.18e-07;1!DOID:3978;5.18e-07;1!DOID:3394;5.18e-07;1!DOID:5844;5.18e-07;1!DOID:1287;9.94e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.60e-13,2;DOID:178,3.62e-07,1;DOID:326,3.62e-07,1;DOID:3978,3.62e-07,1;DOID:3394,3.62e-07,1;DOID:5844,3.62e-07,1;DOID:1287,8.59e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.65e-30!115;UBERON:0002107!6.79e-14!19;UBERON:0006925!6.79e-14!19;UBERON:0008836!6.79e-14!19;UBERON:0009497!9.82e-14!25;UBERON:0000015!9.82e-14!25;UBERON:0002423!9.82e-14!25;UBERON:0006235!9.82e-14!25;UBERON:0004161!9.82e-14!25;UBERON:0008835!9.88e-14!22;UBERON:0003894!9.88e-14!22;UBERON:0005057!2.39e-13!26;UBERON:0009854!5.34e-13!23;UBERON:0003929!3.32e-12!54;UBERON:0007499!1.03e-11!25;UBERON:0009856!3.83e-11!26;UBERON:0002368!5.72e-09!35;UBERON:0002365!5.78e-09!31;UBERON:0002330!5.78e-09!31;UBERON:0005172!1.68e-08!55;UBERON:0005173!1.68e-08!55;UBERON:0003978!3.83e-08!3;UBERON:0009751!3.83e-08!3;UBERON:0000946!3.83e-08!3;UBERON:0002523!3.83e-08!3;UBERON:0005983!3.83e-08!3;UBERON:0002165!3.83e-08!3;UBERON:0002062!3.83e-08!3;UBERON:0007280!3.83e-08!3;UBERON:0005911!4.85e-08!82;UBERON:0004151!7.91e-08!3;UBERON:0000344!1.28e-07!12;UBERON:0000949!1.79e-07!45;UBERON:0004921!2.44e-07!129;UBERON:0004185!2.44e-07!129;UBERON:0001007!2.75e-07!155;UBERON:0001555!2.75e-07!155;UBERON:0007026!2.75e-07!155;UBERON:0002417!2.99e-07!61;UBERON:0000916!2.99e-07!61;UBERON:0007100!8.35e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.46e-30;19!UBERON:0006925;8.46e-30;19!UBERON:0002423;3.19e-22;25!UBERON:0002365;7.59e-21;31!UBERON:0002330;7.59e-21;31!UBERON:0002368;3.14e-15;33!UBERON:0000949;7.65e-13;43!UBERON:0003978;6.59e-09;3!UBERON:0000946;6.59e-09;3!UBERON:0005172;2.40e-08;52!UBERON:0005173;2.40e-08;52!UBERON:0007100;6.17e-08;25!UBERON:0001301;2.09e-07;1!UBERON:0002146;2.51e-07;1!UBERON:0005623;2.51e-07;1!UBERON:0002135;2.84e-07;1!UBERON:0002084;5.18e-07;1!UBERON:0000989;5.18e-07;1!UBERON:0000941;5.18e-07;1!UBERON:0001785;5.18e-07;1!UBERON:0002464;5.18e-07;1!UBERON:0004904;5.18e-07;1!UBERON:0008811;5.18e-07;1!UBERON:0001021;5.18e-07;1!UBERON:0002082;5.18e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.74e-30,19;UBERON:0006925,9.74e-30,19;UBERON:0008836,9.74e-30,19;UBERON:0008835,1.92e-25,22;UBERON:0003894,1.92e-25,22;UBERON:0009854,2.93e-24,23;UBERON:0007499,3.55e-22,25;UBERON:0009497,3.55e-22,25;UBERON:0000015,3.55e-22,25;UBERON:0002423,3.55e-22,25;UBERON:0006235,3.55e-22,25;UBERON:0004161,3.55e-22,25;UBERON:0009856,2.96e-21,26;UBERON:0002365,3.96e-21,31;UBERON:0002330,3.96e-21,31;UBERON:0002368,2.48e-15,35;UBERON:0007023,1.08e-14,114;UBERON:0000949,4.55e-14,45;UBERON:0005172,1.21e-13,54;UBERON:0005173,1.21e-13,54;UBERON:0002417,4.80e-12,60;UBERON:0000916,4.80e-12,60;UBERON:0002530,3.95e-10,59;UBERON:0003929,2.59e-09,54;UBERON:0001041,5.94e-09,87;UBERON:0003978,6.33e-09,3;UBERON:0009751,6.33e-09,3;UBERON:0000946,6.33e-09,3;UBERON:0002523,6.33e-09,3;UBERON:0005983,6.33e-09,3;UBERON:0002165,6.33e-09,3;UBERON:0002062,6.33e-09,3;UBERON:0007280,6.33e-09,3;UBERON:0005177,8.91e-09,101;UBERON:0003914,2.17e-08,117;UBERON:0001301,2.09e-07,1;UBERON:0007100,2.29e-07,27;UBERON:0002146,2.52e-07,1;UBERON:0005623,2.52e-07,1;UBERON:0002135,2.67e-07,1;UBERON:0001048,3.65e-07,160;UBERON:0002084,3.85e-07,1;UBERON:0002082,3.85e-07,1;UBERON:0010226,3.85e-07,1;UBERON:0000989,4.08e-07,1;UBERON:0008811,4.08e-07,1;UBERON:0006258,4.08e-07,1;UBERON:0005876,4.08e-07,1;UBERON:0004874,4.08e-07,1;UBERON:0000941,5.50e-07,1;UBERON:0001785,5.50e-07,1;UBERON:0002464,5.50e-07,1;UBERON:0004904,5.50e-07,1;UBERON:0001021,5.50e-07,1;UBERON:0003902,5.50e-07,1;UBERON:0005425,5.50e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,5.04269440666194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,6029.73700647449,3051.67850778403,3295.42609946887,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1224.84850545647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,1226.03471751599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36968812325356,0,0,0,0,0,0,0,0,0,0,0,16.5375830248388,0,0,0,0,0,0.269605053441981,0,0,0,0,0,22.29465316019,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,10.8330534310059,0,0,0,0,0.678923115418936,0,0,0,0,0.0633107959558787,0,0.320635281006135,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0.288950589901519,0,0,0,0,0,3.90995361781156,4.35404805622199,0.717873024576814,1.99679000498991,3.004582336956,5.13294352116307,0.201550417460179,0,1.16495949527454,1.41809728153003,1.483485450861,2.08950985947973,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.472834243795189,0.786818822024972,0,0,0,0.714695326373367,1.98627591109629,0,0,0,0,0,0.082092520749339,0,0.226624183040251,3549.78820415051,1229.66392910541,0,0,0,0,0.961086713109252,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0.807378228159255,1.42769420259154,0.0981477185010256,0.11796972334774,0,0.115525666150338,0,0,0,0.300841313397029,0,183.655792639777,0,0,0,0.337687923091973,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0.177404740325278,0,0.685952037749674,0,0.0657727735628491,0.236387681767936,0,0.313972371402056,0,0,0,0.215927591218621,0,0,0,0,0,0,0,1.0243108625637,0,0,0,0,0,0,0,0,0,0,0,0,13.3461648913121,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,15.4054352256849,0,0.178553938605658,0,0,0,0,0,0,0.0679914901909147,0,0,0,1.38652688589425,0,0,0,0,0.101988829741982,0,0,0,1.66713136080127,0.267964130156178,0,0,1.49263787330687,0,0,0.434523000071005,0,0.954707374172474,0,0,0,0.26940821205835,2.58199939413635,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0.805095174364105,0 | |||
|short_description=p1@ITIH4 | |||
}} |
Revision as of 19:14, 21 January 2014
Short description: | p1@ITIH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITIH4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000406595, ENST00000485816, ENST00000538421, uc003dfz.2, uc011bem.1, uc011ben.1_5end |
EntrezGene: | ITIH4 |
HGNC: | 6169 |
UniProt: | E9PGN5B7ZKJ8F5H194 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.80e-23 | 12 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.60e-13 | 2 |
vascular disease | 3.62e-07 | 1 |
ischemia | 3.62e-07 | 1 |
extrinsic cardiomyopathy | 3.62e-07 | 1 |
myocardial ischemia | 3.62e-07 | 1 |
myocardial infarction | 3.62e-07 | 1 |
cardiovascular system disease | 8.59e-07 | 4 |