FFCP PHASE1:Hg19::chr3:108343281..108343293,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:108343281..108343293,+ | |||
|id=chr3:108343281..108343293,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.91e-15;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.43e-11;3!UBERON:0003057;9.43e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.92e-19!82;UBERON:0002780!1.83e-18!41;UBERON:0001890!1.83e-18!41;UBERON:0006240!1.83e-18!41;UBERON:0005743!2.61e-18!86;UBERON:0003080!8.70e-18!42;UBERON:0000073!8.74e-18!94;UBERON:0001016!8.74e-18!94;UBERON:0001049!9.02e-18!57;UBERON:0005068!9.02e-18!57;UBERON:0006241!9.02e-18!57;UBERON:0007135!9.02e-18!57;UBERON:0002791!1.47e-17!33;UBERON:0002020!6.05e-17!34;UBERON:0003528!6.05e-17!34;UBERON:0001893!8.50e-17!34;UBERON:0001869!1.01e-15!32;UBERON:0002616!2.13e-15!59;UBERON:0000955!6.45e-15!69;UBERON:0006238!6.45e-15!69;UBERON:0000956!6.93e-15!25;UBERON:0000203!6.93e-15!25;UBERON:0003075!2.14e-14!86;UBERON:0007284!2.14e-14!86;UBERON:0002346!4.25e-14!90;UBERON:0003056!5.00e-14!61;UBERON:0002619!6.48e-14!22;UBERON:0001950!1.03e-13!20;UBERON:0007023!2.18e-10!115;UBERON:0000924!1.06e-07!173;UBERON:0006601!1.06e-07!173;UBERON:0004121!1.06e-07!169;UBERON:0000153!4.78e-07!129;UBERON:0007811!4.78e-07!129;UBERON:0000033!5.10e-07!123;UBERON:0001871!5.99e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;3.02e-17;6!UBERON:0002771;1.15e-15;2!UBERON:0000007;1.91e-15;2!UBERON:0002360;1.91e-15;2!UBERON:0000094;1.91e-15;2!UBERON:0010743;1.91e-15;2!UBERON:0002240;9.43e-11;3!UBERON:0005174;9.43e-11;3!UBERON:0002114;9.43e-11;2!UBERON:0001137;9.43e-11;3!UBERON:0003296;2.18e-08;4!UBERON:0010133;2.18e-08;4!UBERON:0002108;5.86e-07;4!UBERON:0001017;8.67e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,3.15e-17,6;UBERON:0002771,1.15e-15,2;UBERON:0000007,1.78e-15,2;UBERON:0002360,2.74e-15,2;UBERON:0000094,2.74e-15,2;UBERON:0010743,2.74e-15,2;UBERON:0001017,1.68e-12,81;UBERON:0001016,2.66e-11,89;UBERON:0002114,7.42e-11,2;UBERON:0002240,1.09e-10,3;UBERON:0005174,1.09e-10,3;UBERON:0001137,1.09e-10,3;UBERON:0001049,1.94e-08,56;UBERON:0005068,1.94e-08,56;UBERON:0006241,1.94e-08,56;UBERON:0007135,1.94e-08,56;UBERON:0003296,2.11e-08,4;UBERON:0010133,2.11e-08,4;UBERON:0002108,5.08e-07,4;UBERON:0002780,8.88e-07,41;UBERON:0001890,8.88e-07,41;UBERON:0003080,8.88e-07,41;UBERON:0006240,8.88e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0.410623275218653,0.251085279189606,0,0,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0.759059076058509,0,0,0,0,0,0,0,0,0,0,0.434473211648397,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0.484938170456436,0,0.10075209822764,0,0,0,0,0,0,0.232387885739037,0.621966330092223,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0.197030760201927,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.54941678891006,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.185803175125719,0,0,0,0.399158742865633,0.191505370132367,0,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0,0,0.422008249231538,0.111308705022906,0,0.211125408127993,0.19924798825107,0,0.503865495708552,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0.371072392647405,0,0,0,0,0,0,0.709163045303809,0,0,0.347249989866585,0.885741385813839,0.241192877250816,0,0.110579259931225,0.886642856860642,1.09692698576986,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0,0,0.067401132980677,0.802577647298789,0.702793337176017,0.364909578431332,0,0,0,1.20990716048664,0.30607276163049,0.063186579628488,0,0.103688191397247,0,0,0,0,0.284609546029793,0.554698692052555,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0.19871461170299,0.126621591911757,0,0,0,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0.458320848023367,0,0.199679000498991,0,0.223171457441873,0.134366944973453,0,0,0,0.164831716762333,0,0,0,0,0.817220436669454,0.321506296930038,0,0.415440338029185,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,4.02686674176478,0.250381861413,0,0.221858103073705,0.0620964029413835,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.489473409012935,0,0,0,0.176689145945881,0.192914038270915,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.218419276384028,0.33946505990805,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.798169295285756,0.82046545696302,0.252071696221718,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.327543835020193,0,0,0.781078098613847,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0,0.127762427639595,0,0.672567444437648,1.21393120847326,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0.236387681767936,0,0.156986185701028,0.314231179832004,0,0,0,0.47775168788705,0,0.316027223465453,0.464965701472501,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,1.17785080268967,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0.135982980381829,0,1.5870805215462,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0.20686599172379,0,0.23806443146374,0,0.0620747142958579,0,0,0.404234377916439,0,0.342233301085281,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr3:108343281..108343293,+ | |||
}} |
Revision as of 20:25, 21 January 2014
Short description: | p@chr3:108343281..108343293, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:108343281..108343293, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
temporal lobe | 3.15e-17 | 6 |
middle temporal gyrus | 1.15e-15 | 2 |
pituitary gland | 1.78e-15 | 2 |
meninx | 2.74e-15 | 2 |
membrane organ | 2.74e-15 | 2 |
meningeal cluster | 2.74e-15 | 2 |
central nervous system | 1.68e-12 | 81 |
nervous system | 2.66e-11 | 89 |
duodenum | 7.42e-11 | 2 |
spinal cord | 1.09e-10 | 3 |
dorsal region element | 1.09e-10 | 3 |
dorsum | 1.09e-10 | 3 |
neural tube | 1.94e-08 | 56 |
neural rod | 1.94e-08 | 56 |
future spinal cord | 1.94e-08 | 56 |
neural keel | 1.94e-08 | 56 |
gland of diencephalon | 2.11e-08 | 4 |
neuroendocrine gland | 2.11e-08 | 4 |
small intestine | 5.08e-07 | 4 |
regional part of forebrain | 8.88e-07 | 41 |
forebrain | 8.88e-07 | 41 |
anterior neural tube | 8.88e-07 | 41 |
future forebrain | 8.88e-07 | 41 |