FFCP PHASE1:Hg19::chr3:168864315..168864339,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2122 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3498 | |||
|TSSclassifier=strong | |||
|UniProt=E7EU48 | |||
|association_with_transcript=0bp_to_ENST00000475754_5end | |||
|description=CAGE_peak_2_at_MECOM_5end | |||
|id=chr3:168864315..168864339,- | |||
|ontology_enrichment_celltype=CL:0002139!1.44e-13!24;CL:0000222!1.57e-13!119;CL:0000071!1.17e-11!18;CL:0002546!1.17e-11!18;CL:0000220!2.46e-11!246;CL:0000359!5.37e-11!32;CL:0002321!5.39e-11!248;CL:0000076!7.42e-10!62;CL:0000192!4.89e-09!42;CL:0000514!4.89e-09!42;CL:0000115!1.70e-08!35;CL:0002078!2.85e-08!44;CL:0000680!6.51e-08!57;CL:0000056!6.51e-08!57;CL:0000355!6.51e-08!57;CL:0000187!6.99e-08!54;CL:0000066!1.09e-07!254;CL:0000183!5.82e-07!59;CL:1000413!7.18e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.54e-15;24!CL:0000071;3.17e-13;18!CL:0000359;1.07e-11;32!CL:0000115;1.78e-09;36!CL:1000413;1.09e-07;9!CL:0000192;4.66e-07;43!CL:0002078;4.89e-07;45!CL:0000076;9.52e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.21e-15,24;CL:0000222,2.66e-14,121;CL:0000071,3.49e-13,18;CL:0002546,3.49e-13,18;CL:0000359,1.30e-12,32;CL:0000076,2.55e-11,63;CL:0000115,5.69e-11,36;CL:0002078,9.78e-10,45;CL:0000192,1.96e-09,43;CL:0000514,1.96e-09,43;CL:0002321,2.42e-09,250;CL:0000213,1.06e-07,58;CL:0000215,1.06e-07,58;CL:1000413,1.12e-07,9;CL:0000187,2.95e-07,55;CL:0000680,4.89e-07,58;CL:0000056,4.89e-07,58;CL:0000355,4.89e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;3.17e-13;18!CL:0000514;4.66e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;1.47e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.98e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004111!1.28e-29!241;UBERON:0000477!8.23e-29!286;UBERON:0004872!8.11e-25!84;UBERON:0001981!1.87e-24!60;UBERON:0007500!1.87e-24!60;UBERON:0004537!1.87e-24!60;UBERON:0006965!1.87e-24!60;UBERON:0002049!6.73e-24!79;UBERON:0007798!6.73e-24!79;UBERON:0000055!7.55e-24!69;UBERON:0003914!5.96e-23!118;UBERON:0000483!9.27e-22!309;UBERON:0000119!3.28e-21!312;UBERON:0000025!5.90e-21!194;UBERON:0000481!9.42e-20!347;UBERON:0001009!6.09e-19!113;UBERON:0004535!2.00e-18!110;UBERON:0001637!2.25e-18!42;UBERON:0003509!2.25e-18!42;UBERON:0004572!2.25e-18!42;UBERON:0004573!1.03e-15!33;UBERON:0004571!1.03e-15!33;UBERON:0000490!1.81e-15!138;UBERON:0000475!6.93e-15!365;UBERON:0000468!2.11e-13!659;UBERON:0000467!3.07e-12!625;UBERON:0000480!5.10e-12!626;UBERON:0003104!1.09e-11!238;UBERON:0009142!1.09e-11!238;UBERON:0001986!1.17e-11!18;UBERON:0004638!1.17e-11!18;UBERON:0004852!1.17e-11!18;UBERON:0000947!5.65e-11!21;UBERON:0010191!5.65e-11!21;UBERON:0003103!7.05e-10!69;UBERON:0000922!1.56e-09!612;UBERON:0000487!1.94e-09!22;UBERON:0002050!2.01e-09!605;UBERON:0005423!2.01e-09!605;UBERON:0000923!3.05e-09!604;UBERON:0005291!3.05e-09!604;UBERON:0006598!3.05e-09!604;UBERON:0002532!3.05e-09!604;UBERON:0006914!4.50e-09!25;UBERON:0007023!8.53e-09!115;UBERON:0002100!1.08e-08!216;UBERON:0002385!3.03e-08!63;UBERON:0001015!3.03e-08!63;UBERON:0000383!3.03e-08!63;UBERON:0001134!5.35e-08!61;UBERON:0002036!5.35e-08!61;UBERON:0003082!5.35e-08!61;UBERON:0005256!1.03e-07!143;UBERON:0000486!2.19e-07!82;UBERON:0000161!6.57e-07!35;UBERON:0003915!7.18e-07!9;UBERON:0004700!7.18e-07!9;UBERON:0001917!7.18e-07!9;UBERON:0007100!8.47e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.59e-16;33!UBERON:0004571;1.59e-16;33!UBERON:0001637;4.53e-16;42!UBERON:0003509;4.53e-16;42!UBERON:0004572;4.53e-16;42!UBERON:0007500;4.10e-15;56!UBERON:0001981;4.10e-15;56!UBERON:0004537;4.10e-15;56!UBERON:0000055;1.19e-13;65!UBERON:0004638;3.17e-13;18!UBERON:0001986;3.17e-13;18!UBERON:0004852;3.17e-13;18!UBERON:0000947;1.97e-12;21!UBERON:0010191;1.97e-12;21!UBERON:0002049;1.34e-11;75!UBERON:0007798;1.34e-11;75!UBERON:0000487;2.06e-10;22!UBERON:0003914;2.30e-10;74!UBERON:0006914;5.01e-09;25!UBERON:0000490;7.42e-08;33!UBERON:0003915;1.09e-07;9!UBERON:0004700;1.09e-07;9!UBERON:0001917;1.09e-07;9!UBERON:0001009;1.15e-07;112!UBERON:0000025;1.38e-07;93!UBERON:0007100;2.59e-07;25!UBERON:0004111;3.04e-07;130!UBERON:0000948;4.48e-07;22!UBERON:0004535;4.97e-07;109!UBERON:0001638;5.47e-07;9!UBERON:0003920;5.47e-07;9!UBERON:0004582;5.47e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,3.61e-29,83;UBERON:0007500,1.06e-28,59;UBERON:0001981,1.06e-28,59;UBERON:0004537,1.06e-28,59;UBERON:0006965,1.06e-28,59;UBERON:0000055,1.58e-28,68;UBERON:0002049,5.93e-28,78;UBERON:0007798,5.93e-28,78;UBERON:0004111,1.29e-25,240;UBERON:0003914,1.39e-25,117;UBERON:0001009,2.63e-23,112;UBERON:0004535,1.04e-22,109;UBERON:0001637,3.86e-21,42;UBERON:0003509,3.86e-21,42;UBERON:0004572,3.86e-21,42;UBERON:0004573,7.53e-18,33;UBERON:0004571,7.53e-18,33;UBERON:0000025,3.26e-17,192;UBERON:0000483,5.87e-17,306;UBERON:0000119,2.92e-16,309;UBERON:0000490,3.35e-13,148;UBERON:0004638,3.49e-13,18;UBERON:0001986,3.49e-13,18;UBERON:0004852,3.49e-13,18;UBERON:0000947,2.14e-12,21;UBERON:0010191,2.14e-12,21;UBERON:0003103,1.36e-10,68;UBERON:0000487,2.17e-10,22;UBERON:0006914,4.19e-09,25;UBERON:0003104,1.06e-08,160;UBERON:0009142,1.06e-08,160;UBERON:0002100,8.74e-08,199;UBERON:0003915,1.12e-07,9;UBERON:0004700,1.12e-07,9;UBERON:0001917,1.12e-07,9;UBERON:0007100,1.40e-07,27;UBERON:0002385,1.48e-07,64;UBERON:0001015,1.48e-07,64;UBERON:0000383,1.48e-07,64;UBERON:0001134,2.79e-07,62;UBERON:0002036,2.79e-07,62;UBERON:0003082,2.79e-07,62;UBERON:0000948,4.27e-07,24;UBERON:0005498,4.27e-07,24;UBERON:0004140,4.27e-07,24;UBERON:0009881,4.27e-07,24;UBERON:0004141,4.27e-07,24;UBERON:0003084,4.27e-07,24;UBERON:0007005,4.27e-07,24;UBERON:0004139,4.27e-07,24;UBERON:0004291,4.27e-07,24;UBERON:0005256,4.42e-07,122;UBERON:0001638,6.37e-07,9;UBERON:0003920,6.37e-07,9;UBERON:0004582,6.37e-07,9 | |||
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| |||
|short_description=p2@MECOM | |||
}} |
Revision as of 22:28, 21 January 2014
Short description: | p2@MECOM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MECOM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000475754_5end |
EntrezGene: | MECOM |
HGNC: | 3498 |
UniProt: | E7EU48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.21e-15 | 24 |
mesodermal cell | 2.66e-14 | 121 |
blood vessel endothelial cell | 3.49e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.49e-13 | 18 |
vascular associated smooth muscle cell | 1.30e-12 | 32 |
squamous epithelial cell | 2.55e-11 | 63 |
endothelial cell | 5.69e-11 | 36 |
meso-epithelial cell | 9.78e-10 | 45 |
smooth muscle cell | 1.96e-09 | 43 |
smooth muscle myoblast | 1.96e-09 | 43 |
embryonic cell | 2.42e-09 | 250 |
lining cell | 1.06e-07 | 58 |
barrier cell | 1.06e-07 | 58 |
endothelial cell of artery | 1.12e-07 | 9 |
muscle cell | 2.95e-07 | 55 |
muscle precursor cell | 4.89e-07 | 58 |
myoblast | 4.89e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.89e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.98e-07 | 14 |