FFCP PHASE1:Hg19::chr4:85420434..85420451,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_at_chr4:85420434..85420451,- | |||
|id=chr4:85420434..85420451,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002600;4.62e-09;2!CL:0002575;1.03e-08;2!CL:0002602;3.24e-08;2!CL:0000333;3.77e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,4.02e-09,2;CL:0002575,1.03e-08,2;CL:0002602,2.79e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.34e-12;3!UBERON:0003057;7.34e-12;3 | |||
|ontology_enrichment_disease=DOID:171!4.84e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.22e-14;10!DOID:169;7.58e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.22e-14,10;DOID:169,7.59e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.99e-26!94;UBERON:0001016!1.99e-26!94;UBERON:0001017!6.76e-25!82;UBERON:0005743!6.39e-24!86;UBERON:0000955!1.99e-22!69;UBERON:0006238!1.99e-22!69;UBERON:0001049!2.91e-22!57;UBERON:0005068!2.91e-22!57;UBERON:0006241!2.91e-22!57;UBERON:0007135!2.91e-22!57;UBERON:0002616!2.23e-19!59;UBERON:0002346!1.08e-18!90;UBERON:0000924!1.13e-16!173;UBERON:0006601!1.13e-16!173;UBERON:0003075!1.36e-15!86;UBERON:0007284!1.36e-15!86;UBERON:0002780!2.64e-14!41;UBERON:0001890!2.64e-14!41;UBERON:0006240!2.64e-14!41;UBERON:0004121!2.97e-14!169;UBERON:0000153!5.68e-14!129;UBERON:0007811!5.68e-14!129;UBERON:0000033!7.01e-14!123;UBERON:0003080!9.07e-14!42;UBERON:0002020!1.78e-12!34;UBERON:0003528!1.78e-12!34;UBERON:0001893!6.88e-12!34;UBERON:0002791!2.84e-11!33;UBERON:0001869!1.83e-10!32;UBERON:0003076!2.72e-10!15;UBERON:0003057!2.72e-10!15;UBERON:0007023!2.32e-09!115;UBERON:0003056!2.18e-08!61;UBERON:0004732!2.81e-08!13;UBERON:0000956!4.99e-08!25;UBERON:0000203!4.99e-08!25;UBERON:0002298!6.83e-08!8;UBERON:0005174!2.38e-07!5;UBERON:0001137!2.38e-07!5;UBERON:0002619!3.14e-07!22;UBERON:0004733!3.61e-07!12;UBERON:0002028!3.61e-07!12;UBERON:0007277!3.61e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;7.34e-12;3!UBERON:0005174;7.34e-12;3!UBERON:0001137;7.34e-12;3!UBERON:0011135;8.04e-12;5!UBERON:0002216;8.04e-12;5!UBERON:0011134;8.04e-12;5!UBERON:0002209;8.04e-12;5!UBERON:0002213;8.04e-12;5!UBERON:0007844;8.04e-12;5!UBERON:0011138;8.04e-12;5!UBERON:0001130;8.04e-12;5!UBERON:0001066;8.04e-12;5!UBERON:0001468;8.04e-12;5!UBERON:0002346;4.38e-10;4!UBERON:0000923;4.38e-10;4!UBERON:0010316;4.38e-10;4!UBERON:0005291;4.38e-10;4!UBERON:0002298;5.00e-10;6!UBERON:0003126;2.08e-09;7!UBERON:0001005;2.08e-09;7!UBERON:0003714;2.69e-09;2!UBERON:0003127;4.44e-09;2!UBERON:0002148;1.84e-08;2!UBERON:0006331;1.84e-08;2!UBERON:0009662;1.84e-08;2!UBERON:0006444;3.24e-08;2!UBERON:0001995;3.24e-08;2!UBERON:0004715;3.24e-08;2!UBERON:0000013;3.77e-08;5!UBERON:0002410;3.77e-08;5!UBERON:0002050;3.86e-08;5!UBERON:0005423;3.86e-08;5!UBERON:0000010;1.34e-07;8!UBERON:0004905;2.01e-07;8!UBERON:0000982;2.01e-07;8!UBERON:0004770;2.01e-07;8!UBERON:0004732;4.88e-07;13!UBERON:0000125;8.27e-07;9!UBERON:0002308;8.27e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,6.19e-12,5;UBERON:0002216,6.19e-12,5;UBERON:0011134,6.19e-12,5;UBERON:0002209,6.19e-12,5;UBERON:0002213,6.19e-12,5;UBERON:0005856,6.19e-12,5;UBERON:0005866,6.19e-12,5;UBERON:0005863,6.19e-12,5;UBERON:0007844,6.19e-12,5;UBERON:0011138,6.19e-12,5;UBERON:0001130,6.19e-12,5;UBERON:0001066,6.19e-12,5;UBERON:0001468,6.19e-12,5;UBERON:0002240,6.69e-12,3;UBERON:0005174,6.69e-12,3;UBERON:0001137,6.69e-12,3;UBERON:0003076,3.50e-11,15;UBERON:0003057,3.50e-11,15;UBERON:0002298,5.94e-10,6;UBERON:0003126,2.04e-09,7;UBERON:0001005,2.04e-09,7;UBERON:0003714,2.70e-09,2;UBERON:0001016,2.80e-09,89;UBERON:0003127,4.91e-09,2;UBERON:0011216,6.79e-09,223;UBERON:0002148,2.49e-08,2;UBERON:0006331,2.49e-08,2;UBERON:0009662,2.49e-08,2;UBERON:0006444,2.79e-08,2;UBERON:0001995,2.79e-08,2;UBERON:0004715,2.79e-08,2;UBERON:0000013,3.77e-08,5;UBERON:0002410,3.77e-08,5;UBERON:0000010,1.34e-07,8;UBERON:0004905,1.72e-07,8;UBERON:0000982,1.72e-07,8;UBERON:0004770,1.72e-07,8;UBERON:0004732,5.37e-07,13;UBERON:0000125,8.15e-07,9;UBERON:0002308,8.15e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.98026164736075,1.32558950291166,0,0,0,0,0.369363174230364,0.408001382488506,0.313454721478088,0.286235987131057,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0.149448680551801,0,0,0,0.816616685019573,0.491337269247072,1.65321249881225,0,0,0,0,0,0.125118519871964,1.38532057742091,0.877955241761676,0,0,0,0,0,0,0.300091096084402,0.412210116953756,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0,0,0,0.560655421726804,0,0.2933531432838,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.8403723757871,1.50051156317903,0.813795071099207,0,0,0,0,0,0,0,0,0,0,2.74121620447837,2.40200396667599,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0.949138274156178,0,0,0,0,0,0,0,0,0,0,0,6.82687234725426,0,0,0,0,0,0,0,0.438450885253763,2.89387767133344,12.462000288886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,1.82587743226554,0,0,0,0,0,0,0,0.614481528616916,0.894704431569664,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,1.55832187032068,0,0,0.996239941255349,0,0,0.511343412510774,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,4.08246458736556,2.43074992906609,2.65722415744152,0,0,0,0,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0.216388639742091,0,0,0,3.26173241548684,3.08909847366257,2.50612678813093,0.202203398942031,0,0.234264445725339,0,0,0,0,3.62972148145992,0.30607276163049,0.568679216656392,0.60129367765797,0.414752765588989,0.664653872707185,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,37.1467933150646,0,0.677942222341597,0,0,0,0,0,0,0.39961921916426,0,0.572682980829578,0,0,0.869767748958028,0,0.271808412147228,0,0.509991088181609,3.17845648891671,0,0.684526894459965,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0.160753148465019,0,0,0,0,0.242998226632099,0,0.0788057072991982,0,0,1.07572403599707,0,0,0,0,0,0,0,0,0.082092520749339,1.02232813071253,0.113312091520126,0,0,2.45637617086946,1.19009341568421,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0.244052529803926,0,1.72022758707021,1.44207766997908,0.931446044120752,11.2062394298347,0.124980407962107,0.151649117541648,0,0,0,0.28984205722165,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,1.82696004375648,0,0.926089897295336,0.97894681802587,0.537266523244462,0,0,0,0,0,0,0.345430341731199,0.607719912354764,0.414775308455192,0,0,0,0.655219697692825,0.737318726261158,0,1.59989916683944,0.106691729694141,0,0,0.552317850755522,0,0,0,0.107824811396682,33.4976456153059,19.5485252363705,4.58277830875868,20.1946174096599,114.640581939577,10.6142534414916,0,0,0,0,0,0.256916900385838,0,0,0.41023272848151,0,0.414943514785307,0.484426936895553,7.13847101295772,0,0.235939446695481,0,0,0,3.4517996303005,0.596748666348824,0.0752103283492573,0.20170506870352,3.12605604493237,0,0,0,0.270150338473579,0,0.206686796501184,0.253663240775627,0,0,0,0.351742488719241,0.255524855279191,1.60710550763486,0.336283722218824,0,0,0,0.115233987555779,0,0.747667062745149,0.197318320688547,0.354581522651905,0.111231401892069,0,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,1.87151570769685,0,0,0.22589216407792,0.219881033490858,0,0,0,0,0,0,1.96308467114945,1.18818560130834,3.3812458206672,0,0,0,0,0.357107877211315,0.352894871715692,0,0.730336388246517,0,1.86341458096887,0,0.339957450954573,0.872701380680755,12.1676173318542,0,0.924351257262837,0,0.883164973845552,0.437062287854782,0,0,0.26721740526556,0.459474497674225,0,0,0,0.829169439458779,0.20686599172379,0.213233981900981,1.42838658878244,0,0,0,0.190941474834495,12.7333829043678,0,0,0,3.01233262649241,4.9899053481902,0.488419611665847,0.426909383510862,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:85420434..85420451,- | |||
}} |
Revision as of 02:02, 22 January 2014
Short description: | p@chr4:85420434..85420451, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:85420434..85420451, - |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 4.02e-09 | 2 |
central nervous system pericyte | 1.03e-08 | 2 |
annulus pulposus cell | 2.79e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.22e-14 | 10 |
neuroendocrine tumor | 7.59e-07 | 6 |