FFCP PHASE1:Hg19::chr4:114900781..114900830,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79642 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26286 | |||
|TSSclassifier=strong | |||
|UniProt=D6RGC1 | |||
|association_with_transcript=0bp_to_ENST00000509829,uc010imv.1_5end | |||
|coexpression_cluster_id=C4362 | |||
|description=CAGE_peak_1_at_ARSJ_5end | |||
|id=chr4:114900781..114900830,- | |||
|ontology_enrichment_celltype=CL:0000055!7.98e-37!180;CL:0000222!9.70e-27!119;CL:0000220!1.37e-24!246;CL:0002321!4.72e-24!248;CL:0000680!9.25e-22!57;CL:0000056!9.25e-22!57;CL:0000355!9.25e-22!57;CL:0000187!1.27e-20!54;CL:0000183!3.52e-20!59;CL:0000192!1.45e-19!42;CL:0000514!1.45e-19!42;CL:0000057!4.83e-19!75;CL:0000359!3.80e-18!32;CL:0000393!8.65e-18!60;CL:0000211!8.65e-18!60;CL:0002620!1.76e-10!23;CL:0002371!2.53e-09!591;CL:0000548!8.56e-09!679;CL:0000004!8.56e-09!679;CL:0000255!8.56e-09!679;CL:0002139!1.61e-08!24;CL:0000012!2.91e-08!682;CL:0000144!1.89e-07!625;CL:0000115!2.09e-07!35;CL:0000071!3.12e-07!18;CL:0002546!3.12e-07!18;CL:0002078!3.70e-07!44;CL:0002539!3.97e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.55e-17;32!CL:0000192;3.08e-15;43!CL:0000187;4.94e-12;55!CL:0002620;7.97e-11;23!CL:0000393;1.34e-09;61!CL:0000211;1.34e-09;61!CL:0002139;1.01e-08;24!CL:0000057;1.03e-08;73!CL:0000071;1.92e-07;18!CL:0002539;2.32e-07;10!CL:0000115;3.92e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.32e-28,121;CL:0002321,8.36e-25,250;CL:0000680,6.30e-23,58;CL:0000056,6.30e-23,58;CL:0000355,6.30e-23,58;CL:0000187,9.62e-22,55;CL:0000192,1.24e-20,43;CL:0000514,1.24e-20,43;CL:0000057,1.81e-20,76;CL:0000359,8.73e-19,32;CL:0000393,1.85e-18,61;CL:0000211,1.85e-18,61;CL:0002620,7.99e-11,23;CL:0002139,8.67e-09,24;CL:0000115,3.24e-08,36;CL:0002078,5.64e-08,45;CL:0000071,1.88e-07,18;CL:0002546,1.88e-07,18;CL:0002539,2.42e-07,10;CL:0000213,5.97e-07,58;CL:0000215,5.97e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;3.08e-15;43!CL:0000355;3.12e-12;58!CL:0000222;1.09e-07;121!CL:0002546;1.92e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.69e-30!79;UBERON:0007798!4.69e-30!79;UBERON:0000055!4.96e-27!69;UBERON:0001981!4.85e-26!60;UBERON:0007500!4.85e-26!60;UBERON:0004537!4.85e-26!60;UBERON:0006965!4.85e-26!60;UBERON:0004872!6.55e-26!84;UBERON:0000914!7.53e-26!83;UBERON:0002329!7.53e-26!83;UBERON:0003077!7.53e-26!83;UBERON:0003059!7.53e-26!83;UBERON:0007282!7.53e-26!83;UBERON:0009618!7.53e-26!83;UBERON:0007285!7.53e-26!83;UBERON:0005256!3.39e-25!143;UBERON:0003914!1.14e-24!118;UBERON:0000475!1.20e-23!365;UBERON:0000490!5.99e-23!138;UBERON:0001637!6.15e-23!42;UBERON:0003509!6.15e-23!42;UBERON:0004572!6.15e-23!42;UBERON:0000119!2.71e-22!312;UBERON:0000483!3.28e-22!309;UBERON:0004290!7.67e-22!70;UBERON:0000486!2.09e-21!82;UBERON:0000481!3.89e-21!347;UBERON:0004535!1.26e-20!110;UBERON:0000477!3.80e-20!286;UBERON:0001009!1.50e-19!113;UBERON:0002100!1.61e-19!216;UBERON:0001134!1.64e-19!61;UBERON:0002036!1.64e-19!61;UBERON:0003082!1.64e-19!61;UBERON:0002385!6.06e-19!63;UBERON:0001015!6.06e-19!63;UBERON:0000383!6.06e-19!63;UBERON:0004573!1.13e-18!33;UBERON:0004571!1.13e-18!33;UBERON:0003104!1.14e-18!238;UBERON:0009142!1.14e-18!238;UBERON:0004111!2.98e-17!241;UBERON:0000468!3.26e-17!659;UBERON:0000467!4.72e-16!625;UBERON:0000480!9.25e-16!626;UBERON:0003102!3.25e-15!95;UBERON:0000025!1.06e-11!194;UBERON:0000947!1.25e-11!21;UBERON:0010191!1.25e-11!21;UBERON:0002050!3.96e-10!605;UBERON:0005423!3.96e-10!605;UBERON:0000923!5.18e-10!604;UBERON:0005291!5.18e-10!604;UBERON:0006598!5.18e-10!604;UBERON:0002532!5.18e-10!604;UBERON:0000922!2.68e-09!612;UBERON:0002097!1.86e-08!40;UBERON:0002199!2.64e-08!45;UBERON:0002416!2.64e-08!45;UBERON:0000926!5.66e-08!448;UBERON:0004120!5.66e-08!448;UBERON:0006603!5.66e-08!448;UBERON:0001986!3.12e-07!18;UBERON:0004638!3.12e-07!18;UBERON:0004852!3.12e-07!18;UBERON:0000487!3.30e-07!22;UBERON:0004237!3.97e-07!10;UBERON:0004695!3.97e-07!10;UBERON:0002111!3.97e-07!10;UBERON:0004178!3.97e-07!10;UBERON:0001135!4.66e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.14e-17;33!UBERON:0004571;1.14e-17;33!UBERON:0001637;2.53e-17;42!UBERON:0003509;2.53e-17;42!UBERON:0004572;2.53e-17;42!UBERON:0007500;1.48e-14;56!UBERON:0001981;1.48e-14;56!UBERON:0004537;1.48e-14;56!UBERON:0000055;3.31e-13;65!UBERON:0002049;2.73e-12;75!UBERON:0007798;2.73e-12;75!UBERON:0000947;5.39e-12;21!UBERON:0010191;5.39e-12;21!UBERON:0003914;4.29e-11;74!UBERON:0004638;1.92e-07;18!UBERON:0001986;1.92e-07;18!UBERON:0004852;1.92e-07;18!UBERON:0004237;2.32e-07;10!UBERON:0004695;2.32e-07;10!UBERON:0002111;2.32e-07;10!UBERON:0004178;2.32e-07;10!UBERON:0000025;3.01e-07;93!UBERON:0000487;4.09e-07;22!UBERON:0001135;5.28e-07;15!UBERON:0002385;5.69e-07;31!UBERON:0001015;5.69e-07;31!UBERON:0000383;5.69e-07;31!UBERON:0000075;6.13e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.63e-30,78;UBERON:0007798,1.63e-30,78;UBERON:0000055,1.72e-27,68;UBERON:0007500,2.40e-26,59;UBERON:0001981,2.40e-26,59;UBERON:0004537,2.40e-26,59;UBERON:0006965,2.40e-26,59;UBERON:0000490,1.76e-25,148;UBERON:0004872,2.25e-25,83;UBERON:0001637,9.19e-24,42;UBERON:0003509,9.19e-24,42;UBERON:0004572,9.19e-24,42;UBERON:0003914,1.12e-23,117;UBERON:0007503,2.86e-23,78;UBERON:0002329,6.64e-23,71;UBERON:0003059,6.64e-23,71;UBERON:0007282,6.64e-23,71;UBERON:0004290,6.64e-23,71;UBERON:0009618,6.64e-23,71;UBERON:0007524,1.07e-22,73;UBERON:0003104,1.13e-22,160;UBERON:0009142,1.13e-22,160;UBERON:0003077,1.45e-22,72;UBERON:0007285,1.45e-22,72;UBERON:0000486,1.51e-22,83;UBERON:0004535,2.78e-21,109;UBERON:0001134,1.77e-20,62;UBERON:0002036,1.77e-20,62;UBERON:0003082,1.77e-20,62;UBERON:0001009,3.08e-20,112;UBERON:0005256,8.34e-20,122;UBERON:0002385,1.29e-19,64;UBERON:0001015,1.29e-19,64;UBERON:0000383,1.29e-19,64;UBERON:0004573,2.48e-19,33;UBERON:0004571,2.48e-19,33;UBERON:0000119,7.71e-19,309;UBERON:0000483,9.37e-19,306;UBERON:0003102,7.54e-16,99;UBERON:0002100,1.24e-15,199;UBERON:0004111,2.04e-13,240;UBERON:0000947,5.13e-12,21;UBERON:0010191,5.13e-12,21;UBERON:0002097,1.62e-08,41;UBERON:0002199,2.20e-08,46;UBERON:0002416,2.20e-08,46;UBERON:0000025,3.16e-08,192;UBERON:0004638,1.88e-07,18;UBERON:0001986,1.88e-07,18;UBERON:0004852,1.88e-07,18;UBERON:0005423,2.35e-07,581;UBERON:0004237,2.42e-07,10;UBERON:0004695,2.42e-07,10;UBERON:0002111,2.42e-07,10;UBERON:0004178,2.42e-07,10;UBERON:0000033,2.46e-07,56;UBERON:0000487,3.99e-07,22;UBERON:0001135,5.80e-07,15;UBERON:0000075,5.89e-07,16;UBERON:0000926,7.90e-07,315;UBERON:0004120,7.90e-07,315;UBERON:0006603,7.90e-07,315 | |||
|phase1_expression=2.90685406832891,4.92431204949261,2.96004248601539,4.00293193412522,1.78784437770915,2.61701557230111,2.53299878168311,3.79031924056099,1.30592814099919,8.60068777755281,2.79120467188971,7.42700665242586,3.4289707169699,22.7730089446486,21.8722267980424,30.9269567367817,28.9293373451509,22.6396128020086,28.7880351286399,13.2970742722931,12.4440421658994,7.20945859399602,7.72837165253853,16.9724287090376,21.5933340103061,0,0,0,0,0,1.39334510984468,1.83884244895785,4.51808878167375,5.9160641626686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,5.36560687762909,12.6583936225095,20.9634708383048,35.0936537445123,17.0918892373772,12.7245751528176,22.3852040339212,11.5332476940163,16.1862460147672,8.7834785693126,1.83370705696798,2.18577172975525,2.59549109949101,0,0,0,0,0,0,13.9133685156694,12.9035189265919,26.3826781221772,26.5694732704285,27.2674633536439,17.3324366422242,16.3016073898712,4.65150166504792,7.82685777910763,12.3846626722928,7.25092770796465,13.6848979029332,2.68468263302986,18.7508170976393,16.2028389576352,17.9492453851,14.3698798480749,15.8782187481484,13.7984973719295,12.3404535743857,12.0913150994069,0,0,11.7745394078484,8.94549513051573,24.5663192629285,46.8728500078795,22.3732564184075,13.8320669057359,19.6237160049807,26.6872489324262,12.333377420858,11.8260193451911,19.8024687942441,18.1442712455939,3.02714855289863,1.15235184896,22.7291788878783,7.49184184392769,10.2684927878001,9.86361291641887,19.2592577775774,14.8923108818681,14.1855314769271,13.8824836453327,9.82674538494144,12.6057453034434,23.7600571456411,27.6938960791984,20.9337113245746,11.4978902690598,16.3286030535444,18.7677779807946,27.1522833174499,23.7047915275652,29.7293161925049,16.6764245386322,23.4804619141244,29.7786795243511,38.4403299873421,30.942057569296,32.7099294731998,21.2288210231184,11.3361837620077,18.7978024894906,37.9746747542849,10.2308855419259,16.9130628743557,29.7321172614627,15.1947293409683,34.7909400666282,28.2105875037393,38.3206938621702,6.1843473012255,13.3645599089509,4.58887352622406,0.243947412259191,0.265059536642971,0,0.207322110030741,0,0,15.6449532329816,8.36213219650751,9.66944449467364,13.4666699129274,4.33127689001751,2.24782920075703,1.85443159085912,3.37415441836875,2.75734931830985,3.26819166138609,3.79632990577755,1.21348177344148,0.98110732562673,1.15424147083917,2.95262181849859,16.8290128564135,7.4083322039652,10.2906097969879,1.26755034821831,0.982827216677626,0.590789906681404,0,1.96781501668982,6.6911446016425,11.6335302533143,2.24803506515239,3.01586917234893,8.24037161910913,30.9517890044808,14.5590869939141,21.649701303791,8.46291956318061,20.1942954085613,12.9929802984966,18.982406015641,14.2690614175949,0.790204397959275,1.71697232418975,0,0,0,8.43604505880993,5.20744597416465,7.79763034833126,12.985985791913,12.7878932946143,4.21720947081732,0,0,0,0,0.25248486685276,0.126995788584338,0,0,1.71072446022705,2.26220483947312,0,0,4.14885012077835,2.1798003441664,4.2536205776151,6.85140093516222,7.15312891703765,10.143633030672,26.0619354253173,15.6011155367049,11.5743318417964,15.6034045225606,12.5218424137567,41.1776621735465,3.7983512377401,2.46972101034231,12.0522388188682,38.0269385154524,11.087326221068,3.61727252471503,2.61460037580088,4.09889263846434,0,0,0,128.918172254471,173.441523109512,12.8373214536647,60.229023573713,12.328579353023,11.4599016473533,0,0,0,0.128343036279748,16.5161505744601,7.8083912314573,3.09315525111078,3.85287410269002,2.55175500661265,0,0,0,51.6531180137579,21.5073324055661,34.7219230335662,25.9963576913509,20.1624757340793,17.0318608236649,29.5196365781637,15.6491971858414,0,7.24311499047534,31.2186031311655,21.9399310564627,23.4585759063824,3.91602314925481,1.71571711905428,0,0.215714200818617,0,5.15316871458641,6.65741758041988,7.86214762657169,2.72918588600655,3.99001130548962,2.24528075546459,2.69092213436972,1.53512174720011,3.86049410744658,2.96836132889982,12.6451948918178,5.68197521002007,9.8552587216571,17.6546505922431,5.22946703069817,1.69203229428271,8.82228469334453,15.1933631744229,16.8777238801972,26.5853105289807,16.6528006998469,4.51199612907412,12.5534999480196,6.27479815341484,5.84556898613043,22.3769453252896,3.4120015221269,16.158902001269,20.2960961136011,6.16909010761157,6.23176806350862,2.50844886927427,12.2340611061618,7.47968408035852,7.83561641527624,0,0,1.28225062558195,4.26419039409617,4.22991913063594,5.66725564062472,1.37354197227515,1.73269949833235,14.9309039879005,5.20048196829217,14.4615536859744,8.70036464629098,10.1672087295665,5.98664331431905,7.02966519671106,9.66782203814463,7.1058180017972,5.11359764496605,5.07482603186403,13.3880781442392,10.7626437724459,19.3971322991768,11.3296714558216,10.2266020845403,40.6107927411526,46.0044598305996,33.2676266590176,30.8737497583873,46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| |||
|short_description=p1@ARSJ | |||
}} |
Revision as of 02:50, 22 January 2014
Short description: | p1@ARSJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARSJ_5end |
Coexpression cluster: | C4362_Multipotent_bone_basal_amniotic_Myoblast_Nucleus_Smooth |
Association with transcript: | 0bp_to_ENST00000509829, uc010imv.1_5end |
EntrezGene: | ARSJ |
HGNC: | 26286 |
UniProt: | D6RGC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.32e-28 | 121 |
embryonic cell | 8.36e-25 | 250 |
muscle precursor cell | 6.30e-23 | 58 |
myoblast | 6.30e-23 | 58 |
multi-potent skeletal muscle stem cell | 6.30e-23 | 58 |
muscle cell | 9.62e-22 | 55 |
smooth muscle cell | 1.24e-20 | 43 |
smooth muscle myoblast | 1.24e-20 | 43 |
fibroblast | 1.81e-20 | 76 |
vascular associated smooth muscle cell | 8.73e-19 | 32 |
electrically responsive cell | 1.85e-18 | 61 |
electrically active cell | 1.85e-18 | 61 |
skin fibroblast | 7.99e-11 | 23 |
endothelial cell of vascular tree | 8.67e-09 | 24 |
endothelial cell | 3.24e-08 | 36 |
meso-epithelial cell | 5.64e-08 | 45 |
blood vessel endothelial cell | 1.88e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.88e-07 | 18 |
aortic smooth muscle cell | 2.42e-07 | 10 |
lining cell | 5.97e-07 | 58 |
barrier cell | 5.97e-07 | 58 |