FFCP PHASE1:Hg19::chr5:36877152..36877170,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25836 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28862 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=260bp_to_ENST00000448238_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_10_at_NIPBL_5end | |||
|id=chr5:36877152..36877170,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.64e-31!140;CL:0000037!2.41e-28!172;CL:0000566!2.41e-28!172;CL:0002031!2.43e-26!124;CL:0000988!5.47e-26!182;CL:0002032!1.87e-25!165;CL:0000837!1.87e-25!165;CL:0000766!1.94e-25!76;CL:0000839!1.63e-23!70;CL:0000557!2.12e-23!71;CL:0002087!1.53e-22!119;CL:0000763!2.76e-22!112;CL:0000049!2.76e-22!112;CL:0002009!5.70e-21!65;CL:0002057!2.89e-20!42;CL:0002194!1.47e-19!63;CL:0000576!1.47e-19!63;CL:0000040!1.47e-19!63;CL:0000559!1.47e-19!63;CL:0000860!1.51e-19!45;CL:0000134!9.38e-08!358;CL:0002320!6.97e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.62e-35;33!CL:0002057;2.62e-35;33!CL:0000473;9.58e-27;39!CL:0000234;9.58e-27;39!CL:0000766;4.63e-18;69!CL:0000576;1.73e-15;48!CL:0001014;8.70e-12;2!CL:0001016;8.70e-12;2!CL:0000094;4.62e-11;8!CL:0000763;7.69e-11;100!CL:0000840;1.49e-08;5!CL:0000775;1.66e-08;3!CL:0000081;4.59e-08;11!CL:0000738;4.82e-08;136!CL:0000767;6.94e-08;3!CL:0000784;6.94e-08;3!CL:0000451;7.08e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.23e-37,72;CL:0000738,8.49e-34,136;CL:0000557,3.12e-33,67;CL:0000763,3.68e-30,108;CL:0000049,3.68e-30,108;CL:0002009,4.58e-30,61;CL:0000860,4.03e-29,42;CL:0002057,4.03e-29,42;CL:0000473,1.60e-28,48;CL:0000234,1.60e-28,48;CL:0000037,3.82e-28,168;CL:0000839,1.48e-27,66;CL:0000988,2.16e-26,177;CL:0002032,1.13e-25,161;CL:0000837,1.13e-25,161;CL:0002194,6.03e-25,59;CL:0000576,6.03e-25,59;CL:0000040,6.03e-25,59;CL:0000559,6.03e-25,59;CL:0002031,2.13e-24,120;CL:0002087,2.39e-19,115;CL:0001014,1.46e-11,2;CL:0001016,1.46e-11,2;CL:0000094,3.48e-11,8;CL:0000134,6.26e-10,354;CL:0002320,1.31e-09,361;CL:0000840,1.58e-08,5;CL:0001029,1.58e-08,5;CL:0000219,1.79e-08,386;CL:0000775,1.85e-08,3;CL:0000081,3.75e-08,11;CL:0000767,4.25e-08,3;CL:0000784,4.89e-08,3;CL:0000451,7.04e-08,10;CL:0000034,2.37e-07,441;CL:0000048,4.36e-07,427;CL:0000723,6.77e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;8.37e-24;42!CL:0000049;1.50e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.10e-21!102;UBERON:0003061!1.10e-21!102;UBERON:0002371!1.63e-19!80;UBERON:0002193!2.53e-19!112;UBERON:0001474!1.26e-18!86;UBERON:0004765!1.13e-13!101;UBERON:0001434!1.13e-13!101;UBERON:0002405!3.36e-13!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.92e-29,76;UBERON:0001474,2.42e-26,82;UBERON:0002390,1.10e-25,98;UBERON:0003061,1.10e-25,98;UBERON:0004765,1.35e-23,90;UBERON:0002193,7.56e-23,108;UBERON:0002405,1.09e-22,93;UBERON:0001434,8.89e-21,100;UBERON:0002204,1.43e-10,167;UBERON:0003081,8.66e-10,203;UBERON:0002384,3.61e-09,371 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.236132343941038,1.57345710739562,1.91914699048606,0.464448369948228,0,0,0,0.154934401160603,0.142169232487422,0,0,0.401088894940283,0,0,0.647787332037959,0.515151135268373,1.30858414901608,3.02300754951048,1.94067248950253,1.62700325833979,1.6446715520873,0.309706370895104,1.1507695692886,1.7931249457037,0.945928919554341,3.10271112662957,1.29096936716765,1.35426486594342,0.564727018627814,1.63743690034707,2.24723484445085,0.918251677112708,3.20929027076094,2.55734850319616,0.659702600373432,0.997318288108159,0.426224750532694,0.870627715885752,1.13477044938228,0.622822248995575,0.502497330513487,0.521482918420201,0.65156653411535,0.605399502633369,1.84138817993782,0.632924774881769,0,0.212604299965044,0.209658645508376,0.22465726229299,0.750884464207532,0.16072558669708,0,0,0.730656615058536,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.382273228125229,0,1.12101712596307,0,0.590129310341499,1.96505381374582,0.411202997999018,0,0.32592226663359,0,0,0.222820913770347,0,0.664601683750863,0.541607727530031,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0.444859689486181,0.535081656179426,0,0.113309342697566,0,0,0.759059076058509,0,0,0,0.301150238155546,0.383959833463255,0,0,0.821127996921047,2.82249440514625,2.94184215361858,0.868946423296794,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0.0945348171640679,0,0,0.130979075497713,0,0,0.324547393654683,0,0.398873881556595,1.66943437013739,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0.208994966536811,0,0,0.66944122552934,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0.408308342509787,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0,0,0,0.206105058476878,0.257640540045629,0,0.506328996723799,0.0974370051611986,0,0,0.323292113637624,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0.468008530278475,0.297262324577456,0,0,0.141775097242386,0,0,0,39.4130590316755,0.44024217006613,0.414656231081544,0.720599767084807,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,1.18218456121156,0.862510299438069,0.513372145118994,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0.749007023947182,5.9832291840805,2.07207756718018,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.173767228936166,0,0,1.03384013061444,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,0.40101294060657,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.658589785919804,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0.714695326373367,0.411362273086194,0.648473311192717,1.08006287447623,0,0.106824071127473,0,0,0,0.144269212976445,0.142283686696828,0,0,0.191505370132367,0,0.324621940274555,0,0.456469358066384,0.156679895773023,0,0,0.642352300414798,0.201799707191048,0,0.687010689511529,0.307240764308458,0.671028323677248,0.333698283423817,0.19538809540204,0,0,0,0,1.4098700508785,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0,0.552567831062295,0,0.306806047506464,0.123084805461069,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.552896299656123,0.295547618953547,0,0,0,0.384751292518985,0.227884111694002,0,0.269272933229316,0,0,0.183195186803725,0,0,0.156980256395025,0,0,0,0,0.37950746544837,0,0.210998064528027,0,0,0,0,0.265372693510018,0,0.889563386041866,0.247127877893006,0,0,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0.394584402849391,1.20990716048664,0.30607276163049,0.189559738885464,0.751617097072463,0.103688191397247,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0,0,0.171594997861965,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0.410716136675979,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0.157566364614447,0,0.0674035438541849,0.0984274815147488,0.169346664131569,0,0.272406812223151,0,0.275078873194468,0.415440338029185,1.1248694577575,2.32140586367385,0.121499113316049,0.335434687599266,0.157611414598396,0,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0.943225830597996,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0.221858103073705,0.18628920882415,0.138348634936231,0.124980407962107,0,0.285465333544967,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0.302461847526478,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0.150257608997218,0,0,0.363697318405119,0,0,0,0,0,0.336749488765919,0,0.192619830407303,0.643324774124777,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0.389720617678777,0.132864840313363,0,0,0,0,0.39997479170986,0,0.172214979660816,0,0.368211900503681,0,1.24415452006595,0.127894371303652,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0.159633859057151,0.41023272848151,0,0.0691572524642179,0,1.42769420259154,0.196295437002051,0,0.183428598521679,0.115525666150338,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0.0887023701626388,0.345701962667338,0,0.203909198930495,0.0657727735628491,0,0,0,0.628462359664008,0.280272163313789,0,0,0,0,0,0.116241425368125,0.173858272302579,0,0,0.17071847709395,0.691259661814092,0,0,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0,0.098150233615243,0,0,0.102662806856247,0,0,0.233939463462106,0,0.118920090777569,0,0.109940516745429,0.150962843566674,0.385870790539723,0,0,0,0.235676547101626,0.392616934229891,0,0.4226557275834,0,0.375935671919414,0.0644578879735772,0.199882311849858,0,0,0.160482733378337,0,0.917458566809082,0.430018749454354,0,0,0,0,0,0,0,0.126166424835079,0.218531143927391,0,0.203977659483963,0.26721740526556,0,0,0.378893491091197,0.803892390468535,0,0.310298987585686,0,0.476128862927481,0.775066918032073,0.186224142887574,0,0.190941474834495,0.404234377916439,0.217716747896961,0,0.134704106029175,0.502055437748735,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0.122241444182866,0.813792356631477,0,0.201273793591026,0.320568492303233 | |||
|short_description=p10@NIPBL | |||
}} |
Revision as of 05:05, 22 January 2014
Short description: | p10@NIPBL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NIPBL_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 260bp_to_ENST00000448238_5end |
EntrezGene: | NIPBL |
HGNC: | 28862 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.92e-29 | 76 |
bone element | 2.42e-26 | 82 |
hematopoietic system | 1.10e-25 | 98 |
blood island | 1.10e-25 | 98 |
skeletal element | 1.35e-23 | 90 |
hemolymphoid system | 7.56e-23 | 108 |
immune system | 1.09e-22 | 93 |
skeletal system | 8.89e-21 | 100 |
musculoskeletal system | 1.43e-10 | 167 |
lateral plate mesoderm | 8.66e-10 | 203 |
connective tissue | 3.61e-09 | 371 |