FFCP PHASE1:Hg19::chr5:44809108..44809123,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10884 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8769 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BUN6 | |||
|association_with_transcript=32bp_to_BC002460_5end | |||
|description=CAGE_peak_3_at_MRPS30_5end | |||
|id=chr5:44809108..44809123,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.47e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.24e-11,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.28e-12!239;DOID:162!1.24e-11!235;DOID:305!5.71e-08!106;DOID:0050687!3.52e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!8.02e-12!32;UBERON:0001893!4.57e-11!34;UBERON:0002020!8.85e-11!34;UBERON:0003528!8.85e-11!34;UBERON:0002619!1.70e-10!22;UBERON:0002791!1.92e-10!33;UBERON:0000956!2.16e-10!25;UBERON:0000203!2.16e-10!25;UBERON:0002780!1.66e-09!41;UBERON:0001890!1.66e-09!41;UBERON:0006240!1.66e-09!41;UBERON:0001950!1.85e-09!20;UBERON:0003080!5.42e-09!42;UBERON:0001017!1.81e-08!82;UBERON:0005743!8.53e-08!86;UBERON:0001737!1.05e-07!9;UBERON:0000073!1.10e-07!94;UBERON:0001016!1.10e-07!94;UBERON:0001049!4.05e-07!57;UBERON:0005068!4.05e-07!57;UBERON:0006241!4.05e-07!57;UBERON:0007135!4.05e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000200;2.05e-15;6!UBERON:0001950;2.37e-15;20!UBERON:0001737;3.34e-14;9!UBERON:0001557;3.34e-14;9!UBERON:0001869;5.01e-14;32!UBERON:0002619;7.65e-14;22!UBERON:0001893;2.33e-13;34!UBERON:0002791;1.26e-12;32!UBERON:0000956;5.13e-12;25!UBERON:0000203;5.13e-12;25!UBERON:0001870;9.81e-12;3!UBERON:0003528;1.13e-10;34!UBERON:0002020;1.13e-10;34!UBERON:0002780;9.86e-09;41!UBERON:0001890;9.86e-09;41!UBERON:0002702;1.54e-08;2!UBERON:0001017;3.86e-07;75!UBERON:0002021;6.18e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.74e-17,81;UBERON:0001869,1.93e-15,32;UBERON:0000200,3.75e-15,6;UBERON:0001950,4.11e-15,20;UBERON:0001016,4.82e-15,89;UBERON:0001737,1.07e-14,9;UBERON:0001893,2.15e-14,34;UBERON:0002619,1.26e-13,22;UBERON:0002780,1.36e-13,41;UBERON:0001890,1.36e-13,41;UBERON:0003080,1.36e-13,41;UBERON:0006240,1.36e-13,41;UBERON:0002791,4.98e-13,32;UBERON:0003528,3.87e-12,34;UBERON:0002020,3.87e-12,34;UBERON:0000956,7.90e-12,25;UBERON:0000203,7.90e-12,25;UBERON:0000073,1.95e-11,53;UBERON:0002616,1.95e-11,53;UBERON:0001870,3.85e-11,3;UBERON:0000955,9.15e-11,68;UBERON:0006238,9.15e-11,68;UBERON:0001049,1.17e-10,56;UBERON:0005068,1.17e-10,56;UBERON:0006241,1.17e-10,56;UBERON:0007135,1.17e-10,56;UBERON:0003056,1.37e-09,61;UBERON:0011216,9.79e-09,223;UBERON:0003075,1.58e-08,82;UBERON:0007284,1.58e-08,82;UBERON:0002702,3.25e-08,2;UBERON:0002346,5.77e-08,86;UBERON:0002021,5.66e-07,5 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0.821246550437305,0.251085279189606,0.61130724598361,0.246301768349837,0.314843125254717,0.393364276848904,0.767658796194425,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,1.09227722252426,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0,0.260118695119756,0.164437904603676,0.276350017785848,0,0.14828656316206,0,1.04535523804977,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.604820229674197,0.267440195783507,0.724122019413995,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0.189069634328136,0,0.351339142772504,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.825354125820202,0.208994966536811,0.258416759169329,0,0.33472061276467,0,0.760272105718513,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0,0,0.468642863667593,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0.286804595389004,0.243947412259191,0.662648841607426,0.232387885739037,0.932949495138334,1.7662459561294,0,0,0,0,0,0,1.8929088006375,0.842923450390509,0.964044119533928,1.65440959098591,0.435758888184812,3.08451804844426,1.8876383142423,1.37355025587742,2.69323009862473,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0.245976877086227,0.171567810298526,0.219500570817251,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0.93733833986777,0,0,0.179117045405697,0,0,0,0.176096868026452,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0.112085143993527,0.394061520403854,0.646882724578552,0.77005821767849,1.27047312111232,1.30139853857622,1.54657762555539,0.502548796003046,3.18969375826582,0,0,0,0.24538298343828,0,0,0.207970861530807,0.535286966391485,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0.426910231213777,0.303127571446259,0,0.30239029332968,0,0,0.561320188866147,0.128139149255701,0.511707249066704,0,0,0,0,0.164254312027618,0,0.348631135379878,0.120859449591622,0.40101294060657,0.460404944679482,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0.366277859273374,0,0,0.650060246036521,0,0,0,0.307007349452259,0,0,0.145016693914229,0.170453254832202,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0,0,0.202910376962704,0.6196469961995,0,0.143411352204052,0.196498082026242,0.35667105148125,0,0.211107635297664,0,0.379473173765715,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0.144269212976445,0.142283686696828,0.318852545457645,0,0,0.423347165447766,0.324621940274555,0.280797178113459,0,1.25343916618419,0,0.338583555603207,0.1605880751037,0.403599414382095,0,0.343505344755765,0.307240764308458,0,0,0,0.835218521685727,0,1.35227839237992,0.33307196799782,0,0.37428108081644,0,3.88353669598443,0.111443384277478,0,0,0.296964680832639,0,1.9882952955326,0.562677665642051,0,0.494411622680279,0.211125408127993,0,0,0.251932747854276,0,0.369254416383208,0,0.359473404589307,0.179021174675609,0,0.0986434056369336,0,0,0,1.66982576691332,0,0.260427761085233,0,0,0.341380344856499,0.254253650292766,0.236387681767936,0.344743373241465,0,0.347249989866585,0,0.482385754501632,0,0.110579259931225,0,1.97446857438575,0.21787692703798,0,0.0769502585037971,0.227884111694002,0.23056390438806,0.269272933229316,0.108647371922008,0,0.0915975934018623,0,0,0,0,0.225595660617181,0.392125068635479,1.00692952185506,0,0.476809736941136,0,0,0,0,0,0.265372693510018,0,0.593042257361244,0,0,0.134802265961354,0,0,0,0,2.67058417487502,0,0,0,0.063186579628488,2.40517471063188,0.414752765588989,0,0.330991955875499,0,1.19472429772959,0,0.832048038078832,0.694238953340524,0,0.0870592065804026,0,0,3.57998425769615,4.31226970808495,4.59846559497972,0.0969890164884194,17.2099447048425,0.225980740780532,0.137041924646751,0,1.01297273529406,0.391102765469606,0.160317640503067,0.426905989478705,0.39961921916426,0,1.60351234632282,0.343189995723929,0.576219191952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| |||
|short_description=p3@MRPS30 | |||
}} |
Revision as of 05:19, 22 January 2014
Short description: | p3@MRPS30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MRPS30_5end |
Coexpression cluster: | NA |
Association with transcript: | 32bp_to_BC002460_5end |
EntrezGene: | MRPS30 |
HGNC: | 8769 |
UniProt: | Q9BUN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.24e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.74e-17 | 81 |
cerebral hemisphere | 1.93e-15 | 32 |
gyrus | 3.75e-15 | 6 |
neocortex | 4.11e-15 | 20 |
nervous system | 4.82e-15 | 89 |
larynx | 1.07e-14 | 9 |
telencephalon | 2.15e-14 | 34 |
regional part of cerebral cortex | 1.26e-13 | 22 |
regional part of forebrain | 1.36e-13 | 41 |
forebrain | 1.36e-13 | 41 |
anterior neural tube | 1.36e-13 | 41 |
future forebrain | 1.36e-13 | 41 |
regional part of telencephalon | 4.98e-13 | 32 |
brain grey matter | 3.87e-12 | 34 |
gray matter | 3.87e-12 | 34 |
cerebral cortex | 7.90e-12 | 25 |
pallium | 7.90e-12 | 25 |
regional part of nervous system | 1.95e-11 | 53 |
regional part of brain | 1.95e-11 | 53 |
frontal cortex | 3.85e-11 | 3 |
brain | 9.15e-11 | 68 |
future brain | 9.15e-11 | 68 |
neural tube | 1.17e-10 | 56 |
neural rod | 1.17e-10 | 56 |
future spinal cord | 1.17e-10 | 56 |
neural keel | 1.17e-10 | 56 |
pre-chordal neural plate | 1.37e-09 | 61 |
organ system subdivision | 9.79e-09 | 223 |
neural plate | 1.58e-08 | 82 |
presumptive neural plate | 1.58e-08 | 82 |
middle frontal gyrus | 3.25e-08 | 2 |
neurectoderm | 5.77e-08 | 86 |
occipital lobe | 5.66e-07 | 5 |