FFCP PHASE1:Hg19::chr5:58571829..58571862,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |||
|TSSclassifier=strong | |||
|UniProt=Q08499 | |||
|association_with_transcript=82bp_to_ENST00000503258,NM_001197220,uc003jrv.2_5end | |||
|coexpression_cluster_id=C2825 | |||
|description=CAGE_peak_9_at_PDE4D_5end | |||
|id=chr5:58571829..58571862,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.71e-14;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.14e-39!115;UBERON:0001049!3.88e-18!57;UBERON:0005068!3.88e-18!57;UBERON:0006241!3.88e-18!57;UBERON:0007135!3.88e-18!57;UBERON:0002780!1.40e-16!41;UBERON:0001890!1.40e-16!41;UBERON:0006240!1.40e-16!41;UBERON:0002616!3.36e-16!59;UBERON:0000477!3.62e-16!286;UBERON:0003080!6.96e-16!42;UBERON:0003075!9.55e-16!86;UBERON:0007284!9.55e-16!86;UBERON:0005743!1.68e-15!86;UBERON:0001017!1.90e-15!82;UBERON:0001893!6.75e-15!34;UBERON:0002346!7.82e-15!90;UBERON:0002020!1.13e-14!34;UBERON:0003528!1.13e-14!34;UBERON:0001869!1.46e-14!32;UBERON:0002791!2.97e-14!33;UBERON:0000955!4.03e-14!69;UBERON:0006238!4.03e-14!69;UBERON:0001950!1.15e-13!20;UBERON:0002619!4.91e-13!22;UBERON:0000073!2.63e-12!94;UBERON:0001016!2.63e-12!94;UBERON:0000481!3.07e-12!347;UBERON:0000064!9.43e-12!219;UBERON:0000956!1.29e-11!25;UBERON:0000203!1.29e-11!25;UBERON:0003056!5.81e-11!61;UBERON:0004111!7.11e-11!241;UBERON:0000062!4.63e-10!511;UBERON:0001737!7.43e-10!9;UBERON:0000468!1.91e-09!659;UBERON:0000153!1.99e-09!129;UBERON:0007811!1.99e-09!129;UBERON:0000467!2.73e-09!625;UBERON:0000480!3.52e-09!626;UBERON:0000033!4.07e-09!123;UBERON:0004121!4.56e-09!169;UBERON:0004921!8.14e-09!129;UBERON:0004185!8.14e-09!129;UBERON:0000922!8.83e-09!612;UBERON:0000924!9.85e-09!173;UBERON:0006601!9.85e-09!173;UBERON:0001007!1.51e-08!155;UBERON:0001555!1.51e-08!155;UBERON:0007026!1.51e-08!155;UBERON:0002050!4.27e-08!605;UBERON:0005423!4.27e-08!605;UBERON:0000923!7.65e-08!604;UBERON:0005291!7.65e-08!604;UBERON:0006598!7.65e-08!604;UBERON:0002532!7.65e-08!604;UBERON:0004119!8.16e-08!169;UBERON:0000925!8.16e-08!169;UBERON:0006595!8.16e-08!169;UBERON:0000025!1.65e-07!194;UBERON:0001557!4.96e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.90e-16;9!UBERON:0001557;7.90e-16;9!UBERON:0001950;4.20e-14;20!UBERON:0002619;1.69e-12;22!UBERON:0000956;1.44e-10;25!UBERON:0000203;1.44e-10;25!UBERON:0001869;5.05e-09;32!UBERON:0007023;1.37e-08;114!UBERON:0000200;1.74e-08;6!UBERON:0001893;2.38e-08;34!UBERON:0002791;9.07e-08;32!UBERON:0003528;2.79e-07;34!UBERON:0002020;2.79e-07;34!UBERON:0001872;2.81e-07;5!UBERON:0000065;8.50e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.08e-30,114;UBERON:0001737,8.38e-16,9;UBERON:0001950,4.40e-14,20;UBERON:0002619,1.76e-12,22;UBERON:0011216,2.22e-12,223;UBERON:0000956,1.50e-10,25;UBERON:0000203,1.50e-10,25;UBERON:0001557,2.15e-10,19;UBERON:0004921,3.54e-10,118;UBERON:0001869,9.89e-10,32;UBERON:0001007,1.78e-09,145;UBERON:0001555,1.78e-09,145;UBERON:0007026,1.78e-09,145;UBERON:0008947,2.76e-09,38;UBERON:0003258,2.76e-09,38;UBERON:0001893,6.50e-09,34;UBERON:0002780,1.65e-08,41;UBERON:0001890,1.65e-08,41;UBERON:0003080,1.65e-08,41;UBERON:0006240,1.65e-08,41;UBERON:0002791,1.66e-08,32;UBERON:0000200,1.94e-08,6;UBERON:0004119,4.30e-08,160;UBERON:0000925,4.30e-08,160;UBERON:0006595,4.30e-08,160;UBERON:0001049,4.78e-08,56;UBERON:0005068,4.78e-08,56;UBERON:0006241,4.78e-08,56;UBERON:0007135,4.78e-08,56;UBERON:0003528,8.77e-08,34;UBERON:0002020,8.77e-08,34;UBERON:0000065,2.55e-07,54;UBERON:0001872,4.94e-07,5;UBERON:0000073,5.50e-07,53;UBERON:0002616,5.50e-07,53 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0.655324116390517,0,0.247532705920093,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,0.50133791063589,2.89693037921647,0,7.78615792484217,0.0945348171640679,0,0.087834785693126,2.48860243445654,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0.626984899610432,1.29208379584664,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,1.83831540172934,0,2.67899184852239,1.34717623575702,1.0135033243499,1.53316637465883,0,0.549605231791222,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,13.7235888046219,9.946496714608,12.2915625240576,16.3235079643943,15.2515610864684,13.9989665275547,8.89886633857085,10.203516186518,11.1576675514453,2.21446636387394,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.469634776943287,0.721832238805369,0,0.570762456703795,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0.144119953416961,0,0.317489471460845,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0,0.910455840033585,0.262248829918848,0,0.308061348417659,0,0,0,0,1.19065593693561,1.29549549661284,0,0,0,0,0,0,0,0,0,0.328014645699706,0,1.64865618636356,0.457847324091717,0.41254749960294,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.589062011728432,0,0,0,0,0,0,1.9109987597118,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,1.06428319221179,0.633322905892992,0,0,0,0,0,0,2.54188262097304,0,0,0,0.459446800413919,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,5.01268954180134,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,7.67276215673701,2.19762268907841,0,0,0,14.0859245995237,0.890894042497916,10.4434638713739,3.97659059106519,0.562677665642051,0,0,0.211125408127993,1.9924798825107,2.21027132424918,0,0,0,0,0,32.044790266934,0,4.53759665929895,0,0,0.969332746095218,1.02044907978036,0,0.520855522170466,0,0,0,0,11.5829964066289,0,2.91604613383254,6.59774980746511,0.885741385813839,0.241192877250816,1.52581736317083,0.221158519862449,0,2.63262476584767,65.5809550384321,0,5.38651809526579,0,0.23056390438806,0.0897576444097721,0,4.14701507651495,0,0.533034776018635,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0.163232808159148,0,2.59666367690509,2.98578579323551,1.76915129006678,2.4441205797345,0,0,0,0.202203398942031,1.60515529459758,0.234264445725339,0,0.391329237864179,0,6.70793484843964,3.62972148145992,0.30607276163049,1.89559738885464,0.751617097072463,1.24425829676697,0,0,0,0,0,0,0,0.0979923974143777,0,2.44617335538842,0,16.3518199878554,25.9467075655959,15.5198213830565,2.13375836274523,0,3.16373037092745,0.137041924646751,0,2.27918865441163,43.0213042016567,0,7.89776080535604,0.999048047910651,0,2.51980511565014,0,1.7286575758578,0,7.54220910773745,0,0.104602846312333,0.203996435272644,0,0.600420288709789,0.273810757783986,0,0.429765441419957,0,14.8019672674295,2.52076466412852,5.74298419661451,1.79711100449092,0,0.446342914883745,1.67958681216816,0,0,0,0,0,0.393709926058995,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0,0,0,1.64023802976667,0,1.97014268247995,4.09145787452985,0,27.7895375965909,0.191915197319445,0.714695326373367,0.662091970365432,0.25426853765475,0,0,0,0,0,0,1.58636928128176,0,0,0.258565912723101,0.52893040697076,6.33021300172019,0,6.72760699176477,11.3187099671759,17.8122793799294,1.9846640872478,0,0.121792598380896,0,0,0.7520696820681,0,0,0,3.54427271986794,1.22026264901963,2.754200475543,0.573409195690071,0.221858103073705,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93561810612423,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,1.41304295212211,2.8339315265117,0.478901577171454,2.46139637088906,0.252071696221718,0.691572524642179,1.29180516505481,0,1.17777262201231,0.471878893390961,0,0,0,0,10.7414759942788,1.65462722368366,0,3.90757005616546,2.3571602503328,0.327543835020193,0,2.22874029240702,3.12431239445539,1.86018116851066,2.09272173639893,1.09394961803644,0.548257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| |||
|short_description=p9@PDE4D | |||
}} |
Revision as of 05:33, 22 January 2014
Short description: | p9@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PDE4D_5end |
Coexpression cluster: | C2825_cervical_gall_bile_rectal_epitheloid_large_umbilical |
Association with transcript: | 82bp_to_ENST00000503258, NM_001197220, uc003jrv.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | Q08499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.08e-30 | 114 |
larynx | 8.38e-16 | 9 |
neocortex | 4.40e-14 | 20 |
regional part of cerebral cortex | 1.76e-12 | 22 |
organ system subdivision | 2.22e-12 | 223 |
cerebral cortex | 1.50e-10 | 25 |
pallium | 1.50e-10 | 25 |
upper respiratory tract | 2.15e-10 | 19 |
subdivision of digestive tract | 3.54e-10 | 118 |
cerebral hemisphere | 9.89e-10 | 32 |
digestive system | 1.78e-09 | 145 |
digestive tract | 1.78e-09 | 145 |
primitive gut | 1.78e-09 | 145 |
respiratory primordium | 2.76e-09 | 38 |
endoderm of foregut | 2.76e-09 | 38 |
telencephalon | 6.50e-09 | 34 |
regional part of forebrain | 1.65e-08 | 41 |
forebrain | 1.65e-08 | 41 |
anterior neural tube | 1.65e-08 | 41 |
future forebrain | 1.65e-08 | 41 |
regional part of telencephalon | 1.66e-08 | 32 |
gyrus | 1.94e-08 | 6 |
endoderm-derived structure | 4.30e-08 | 160 |
endoderm | 4.30e-08 | 160 |
presumptive endoderm | 4.30e-08 | 160 |
neural tube | 4.78e-08 | 56 |
neural rod | 4.78e-08 | 56 |
future spinal cord | 4.78e-08 | 56 |
neural keel | 4.78e-08 | 56 |
brain grey matter | 8.77e-08 | 34 |
gray matter | 8.77e-08 | 34 |
respiratory tract | 2.55e-07 | 54 |
parietal lobe | 4.94e-07 | 5 |
regional part of nervous system | 5.50e-07 | 53 |
regional part of brain | 5.50e-07 | 53 |