FFCP PHASE1:Hg19::chr5:67589170..67589201,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1531 | |||
|description=CAGE_peak_at_chr5:67589170..67589201,+ | |||
|id=chr5:67589170..67589201,+ | |||
|ontology_enrichment_celltype=CL:0000084!3.73e-07!25;CL:0000827!3.73e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002623;8.98e-09;3!CL:0000623;1.03e-08;3!CL:0000084;6.11e-08;25!CL:0000791;1.17e-07;18!CL:0000789;1.17e-07;18!CL:0002419;1.17e-07;18!CL:0000624;4.47e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,7.52e-09,3;CL:0000623,1.13e-08,3;CL:0000825,1.13e-08,3;CL:0000084,6.44e-08,25;CL:0000827,6.44e-08,25;CL:0000791,9.16e-08,18;CL:0000789,9.16e-08,18;CL:0002420,9.16e-08,18;CL:0002419,9.16e-08,18;CL:0000790,9.16e-08,18;CL:0000624,3.14e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.17e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.86e-15!115;UBERON:0003080!1.35e-12!42;UBERON:0002780!4.70e-12!41;UBERON:0001890!4.70e-12!41;UBERON:0006240!4.70e-12!41;UBERON:0001049!6.30e-12!57;UBERON:0005068!6.30e-12!57;UBERON:0006241!6.30e-12!57;UBERON:0007135!6.30e-12!57;UBERON:0002020!8.98e-11!34;UBERON:0003528!8.98e-11!34;UBERON:0001893!1.45e-10!34;UBERON:0002791!2.65e-10!33;UBERON:0001869!5.05e-10!32;UBERON:0002616!9.65e-10!59;UBERON:0001017!4.05e-09!82;UBERON:0005743!7.65e-09!86;UBERON:0002619!1.44e-08!22;UBERON:0002346!1.95e-08!90;UBERON:0003056!4.40e-08!61;UBERON:0003075!8.99e-08!86;UBERON:0007284!8.99e-08!86;UBERON:0001950!1.35e-07!20;UBERON:0000956!2.68e-07!25;UBERON:0000203!2.68e-07!25;UBERON:0000955!2.69e-07!69;UBERON:0006238!2.69e-07!69;UBERON:0000073!7.03e-07!94;UBERON:0001016!7.03e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;5.62e-14;32!UBERON:0003528;4.49e-13;34!UBERON:0002020;4.49e-13;34!UBERON:0001893;1.69e-12;34!UBERON:0001869;1.81e-12;32!UBERON:0002619;6.02e-12;22!UBERON:0001950;3.40e-11;20!UBERON:0000956;3.00e-10;25!UBERON:0000203;3.00e-10;25!UBERON:0002780;2.59e-09;41!UBERON:0001890;2.59e-09;41!UBERON:0000073;3.50e-08;53!UBERON:0002616;3.50e-08;53!UBERON:0009663;5.59e-08;7!UBERON:0001870;9.17e-08;3!UBERON:0005383;1.35e-07;3!UBERON:0005382;1.35e-07;3!UBERON:0001044;4.91e-07;6!UBERON:0003293;4.91e-07;6!UBERON:0003294;4.91e-07;6!UBERON:0010047;4.91e-07;6!UBERON:0003408;4.91e-07;6!UBERON:0000167;4.91e-07;6!UBERON:0000200;8.32e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002791,2.07e-16,32;UBERON:0003528,3.25e-15,34;UBERON:0002020,3.25e-15,34;UBERON:0001893,3.25e-15,34;UBERON:0001869,2.08e-14,32;UBERON:0002780,1.73e-13,41;UBERON:0001890,1.73e-13,41;UBERON:0003080,1.73e-13,41;UBERON:0006240,1.73e-13,41;UBERON:0002619,2.50e-12,22;UBERON:0000073,3.74e-12,53;UBERON:0002616,3.74e-12,53;UBERON:0001950,1.57e-11,20;UBERON:0001049,3.04e-11,56;UBERON:0005068,3.04e-11,56;UBERON:0006241,3.04e-11,56;UBERON:0007135,3.04e-11,56;UBERON:0000956,1.40e-10,25;UBERON:0000203,1.40e-10,25;UBERON:0000955,3.08e-08,68;UBERON:0006238,3.08e-08,68;UBERON:0009663,3.91e-08,7;UBERON:0003056,1.06e-07,61;UBERON:0001870,1.23e-07,3;UBERON:0005383,1.23e-07,3;UBERON:0005382,1.23e-07,3;UBERON:0001044,3.34e-07,6;UBERON:0003293,3.34e-07,6;UBERON:0003294,3.34e-07,6;UBERON:0010047,3.34e-07,6;UBERON:0000167,3.34e-07,6;UBERON:0007023,3.43e-07,114;UBERON:0000200,7.31e-07,6 | |||
|phase1_expression=0,1.07050261945492,0.422863212287913,2.00146596706261,1.34088328328186,1.74467704820074,2.53299878168311,0,1.56711376919903,0,0,0,0,0.618831764800233,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0.410623275218653,0,0.152826811495903,0,0,0,1.15148819429164,0,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,0.802177789880567,1.95309783644267,0.223915474239924,0,0,0.726991193897824,0.755751887377619,0,0.464858073811369,0.411167888021826,0.619412741790207,0.863077176966451,0.512321413058201,0.709446689665756,0,0,0,0.564727018627814,0.272906150057846,0.449446968890169,0.306083892370903,0,0,0.659702600373432,0.598390972864896,0,0.290209238628584,0,0,1.25624332628372,0.521482918420201,0,0.605399502633369,0,0.949387162322653,0.211255286311942,0.425208599930087,0,0,0.150176892841506,0.16072558669708,0,0.59675003159727,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0.790152254325231,0.983548850569165,7.8602152549833,9.25206745497792,0.334372990781356,0.977766799900771,2.36723902867367,1.94826728407911,0.334231370655521,2.3568472597987,3.32300841875432,1.08321545506006,0.640456598628376,1.30059347559878,1.15106533222573,0.552700035571697,0,0.889719378972363,0,1.04535523804977,0.566546713487831,1.91610246800961,1.37450978193052,3.79529538029254,1.59282707162048,0,0.950452044448374,0.301150238155546,0.639933055772092,0,0.236777252044017,0,1.20964045934839,8.29064606928873,5.64815175142916,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.87834785693126,0.0654895377488563,0,0,0.324547393654683,0.522389211897802,0.531831842075461,0,0,0,0,0,0,0,0,0.550236083880135,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0,0,0.61417158655884,0.103325781175765,0,0.741800787835671,0,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0.453728732640084,0.538168907066586,0.213557388818567,0.423863802319124,0.600182192168805,0.103052529238439,0.772921620136887,0,0,0.194874010322397,1.26216887122057,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0,0.132529768321485,0,0.310983165046111,0,0,0,0,0,3.71494342425583,0.721879481669586,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,2.53510069643662,0,0.590789906681404,0,0.368965315629341,0.514703430895577,0.109750285408626,0,0.804231779293047,0.0925884451585296,0,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0.462985512576611,1.33177906564219,0.790204397959275,0.858486162094873,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0,1.07470227243418,0.581267877027924,0,0.985326475791887,0.704387472105808,0.414656231081544,0.288239906833923,0.12624243342638,0.190493682876507,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0,0,0.845302752556,1.06375246633948,1.04007436911366,0,0,0,0.57191197463259,0,0,0.325736184293735,0.355391948742546,0,0,0,0.399891964728228,0,1.00451418286425,2.10833939483032,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0.336255431980582,2.36436912242313,3.45004119775228,7.31555306794566,0,0,0.773288812777695,0.335032530668698,0.637938751653163,0.749007023947182,2.99161459204025,0,0.49076596687656,0.500170521059677,0,0.623912584592421,2.14114786556594,0.315404830067869,0.585707074963566,0,0,0,0,0.184369168541703,0.173767228936166,0,0.343143423810856,0.413536052245775,0.647142602455851,0.640365346820666,0,1.66435439510497,0,0,0,0,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0,0.519254429183621,0.348631135379878,0,0,0.184161977871793,0.229628896329213,1.0925470080403,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.784306353074702,0,0,0.650756789328606,0.618246069886334,0.183138929636687,0,0,0.650060246036521,0,0,0.308097234229289,0,0.275673144969061,0.429680979473094,0.580066775656914,0,0.178064071293475,0,0,0.255225424989168,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,2.99557291623744,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,1.58625035258854,0,0,0,0,0.577076851905779,0.213425530045242,2.07254154547469,0.399158742865633,0.5745161103971,0,0.973865820823666,0.280797178113459,0.456469358066384,0.313359791546046,0,0.338583555603207,0.321176150207399,1.21079824314629,0,0.687010689511529,0,0,0.166849141711909,0.19538809540204,0,0,0,0.33307196799782,0,0.37428108081644,0.879049075631364,0,0.111443384277478,0,0.47748896947538,0,0.614321404198464,0.994147647766298,0.422008249231538,0.222617410045812,0.329607748453519,0,0.996239941255349,0,0,0,0,0,0,0,0.511572370226872,0.29593021691080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| |||
|short_description=p@chr5:67589170..67589201,+ | |||
}} |
Revision as of 05:45, 22 January 2014
Short description: | p@chr5:67589170..67589201, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr5:67589170..67589201, + |
Coexpression cluster: | C1531_CD4_CD8_medial_Natural_salivary_olfactory_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 7.52e-09 | 3 |
natural killer cell | 1.13e-08 | 3 |
pro-NK cell | 1.13e-08 | 3 |
T cell | 6.44e-08 | 25 |
pro-T cell | 6.44e-08 | 25 |
mature alpha-beta T cell | 9.16e-08 | 18 |
alpha-beta T cell | 9.16e-08 | 18 |
immature T cell | 9.16e-08 | 18 |
mature T cell | 9.16e-08 | 18 |
immature alpha-beta T cell | 9.16e-08 | 18 |
CD4-positive, alpha-beta T cell | 3.14e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
regional part of telencephalon | 2.07e-16 | 32 |
brain grey matter | 3.25e-15 | 34 |
gray matter | 3.25e-15 | 34 |
telencephalon | 3.25e-15 | 34 |
cerebral hemisphere | 2.08e-14 | 32 |
regional part of forebrain | 1.73e-13 | 41 |
forebrain | 1.73e-13 | 41 |
anterior neural tube | 1.73e-13 | 41 |
future forebrain | 1.73e-13 | 41 |
regional part of cerebral cortex | 2.50e-12 | 22 |
regional part of nervous system | 3.74e-12 | 53 |
regional part of brain | 3.74e-12 | 53 |
neocortex | 1.57e-11 | 20 |
neural tube | 3.04e-11 | 56 |
neural rod | 3.04e-11 | 56 |
future spinal cord | 3.04e-11 | 56 |
neural keel | 3.04e-11 | 56 |
cerebral cortex | 1.40e-10 | 25 |
pallium | 1.40e-10 | 25 |
brain | 3.08e-08 | 68 |
future brain | 3.08e-08 | 68 |
telencephalic nucleus | 3.91e-08 | 7 |
pre-chordal neural plate | 1.06e-07 | 61 |
frontal cortex | 1.23e-07 | 3 |
caudate-putamen | 1.23e-07 | 3 |
dorsal striatum | 1.23e-07 | 3 |
saliva-secreting gland | 3.34e-07 | 6 |
gland of oral region | 3.34e-07 | 6 |
gland of foregut | 3.34e-07 | 6 |
oral gland | 3.34e-07 | 6 |
oral cavity | 3.34e-07 | 6 |
adult organism | 3.43e-07 | 114 |
gyrus | 7.31e-07 | 6 |