FFCP PHASE1:Hg19::chr5:98105523..98105543,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:98105523..98105543,+ | |||
|id=chr5:98105523..98105543,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.74e-29!180;CL:0000680!3.93e-20!57;CL:0000056!3.93e-20!57;CL:0000355!3.93e-20!57;CL:0000183!1.51e-18!59;CL:0000057!4.92e-18!75;CL:0000187!6.08e-18!54;CL:0000192!1.36e-17!42;CL:0000514!1.36e-17!42;CL:0002620!2.01e-16!23;CL:0000393!3.12e-15!60;CL:0000211!3.12e-15!60;CL:0000359!1.16e-13!32;CL:0000222!7.13e-11!119;CL:0002371!2.51e-08!591;CL:0000144!1.53e-07!625;CL:0000048!3.11e-07!430;CL:0000723!5.94e-07!436;CL:0000220!6.03e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.03e-19;23!CL:0000359;2.23e-13;32!CL:0000192;5.03e-13;43!CL:0000187;7.83e-09;55!CL:0000393;1.59e-08;61!CL:0000211;1.59e-08;61!CL:0000057;3.25e-08;73!CL:0002556;2.93e-07;6!CL:0002320;4.42e-07;188!CL:0000346;4.73e-07;3!CL:1000428;4.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.25e-20,76;CL:0000680,6.95e-20,58;CL:0000056,6.95e-20,58;CL:0000355,6.95e-20,58;CL:0002620,3.92e-19,23;CL:0000187,1.94e-16,55;CL:0000192,6.84e-16,43;CL:0000514,6.84e-16,43;CL:0000723,3.54e-14,433;CL:0000048,4.09e-14,427;CL:0000393,4.48e-14,61;CL:0000211,4.48e-14,61;CL:0000359,1.37e-13,32;CL:0000034,1.68e-13,441;CL:0000222,1.14e-08,121;CL:0002556,3.61e-07,6;CL:0000346,4.46e-07,3;CL:1000428,4.46e-07,3;CL:0002539,8.36e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;5.03e-13;43!CL:0000355;6.32e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!3.97e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;6.46e-07;5!DOID:450;6.46e-07;5!DOID:66;6.46e-07;5!DOID:423;6.46e-07;5!DOID:0080000;6.46e-07;5!DOID:11722;6.46e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.12e-07,5;DOID:450,5.12e-07,5;DOID:66,5.12e-07,5;DOID:423,5.12e-07,5;DOID:0080000,5.12e-07,5;DOID:11722,5.12e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.38e-28!83;UBERON:0002329!9.38e-28!83;UBERON:0003077!9.38e-28!83;UBERON:0003059!9.38e-28!83;UBERON:0007282!9.38e-28!83;UBERON:0009618!9.38e-28!83;UBERON:0007285!9.38e-28!83;UBERON:0004290!5.82e-23!70;UBERON:0000486!1.05e-19!82;UBERON:0001134!1.23e-17!61;UBERON:0002036!1.23e-17!61;UBERON:0003082!1.23e-17!61;UBERON:0000475!2.62e-17!365;UBERON:0002385!1.61e-16!63;UBERON:0001015!1.61e-16!63;UBERON:0000383!1.61e-16!63;UBERON:0005256!6.07e-16!143;UBERON:0002097!6.88e-16!40;UBERON:0002199!5.04e-15!45;UBERON:0002416!5.04e-15!45;UBERON:0003102!5.26e-13!95;UBERON:0002100!2.40e-10!216;UBERON:0001637!1.55e-09!42;UBERON:0003509!1.55e-09!42;UBERON:0004572!1.55e-09!42;UBERON:0004573!3.10e-09!33;UBERON:0004571!3.10e-09!33;UBERON:0000490!8.93e-09!138;UBERON:0000481!4.26e-08!347;UBERON:0000119!6.36e-08!312;UBERON:0002049!1.24e-07!79;UBERON:0007798!1.24e-07!79;UBERON:0000483!1.70e-07!309;UBERON:0002067!3.37e-07!9;UBERON:0004016!3.37e-07!9;UBERON:0010083!3.37e-07!9;UBERON:0001981!9.85e-07!60;UBERON:0007500!9.85e-07!60;UBERON:0004537!9.85e-07!60;UBERON:0006965!9.85e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.56e-12;41!UBERON:0002199;8.00e-10;46!UBERON:0002416;8.00e-10;46!UBERON:0003102;2.18e-09;50!UBERON:0002067;3.11e-09;9!UBERON:0000075;8.14e-08;16!UBERON:0002385;1.72e-07;31!UBERON:0001015;1.72e-07;31!UBERON:0000383;1.72e-07;31!UBERON:0004573;2.20e-07;33!UBERON:0004571;2.20e-07;33!UBERON:0001758;2.93e-07;6!UBERON:0003672;2.93e-07;6!UBERON:0000412;4.73e-07;3!UBERON:0001992;4.73e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.23e-25,73;UBERON:0002329,1.21e-24,71;UBERON:0003059,1.21e-24,71;UBERON:0007282,1.21e-24,71;UBERON:0004290,1.21e-24,71;UBERON:0009618,1.21e-24,71;UBERON:0003077,3.80e-24,72;UBERON:0007285,3.80e-24,72;UBERON:0007503,7.06e-23,78;UBERON:0000486,1.67e-19,83;UBERON:0001134,4.91e-18,62;UBERON:0002036,4.91e-18,62;UBERON:0003082,4.91e-18,62;UBERON:0002385,3.35e-17,64;UBERON:0001015,3.35e-17,64;UBERON:0000383,3.35e-17,64;UBERON:0003102,2.42e-16,99;UBERON:0002097,2.89e-16,41;UBERON:0002199,1.89e-15,46;UBERON:0002416,1.89e-15,46;UBERON:0005256,2.38e-15,122;UBERON:0003104,6.26e-13,160;UBERON:0009142,6.26e-13,160;UBERON:0000490,3.55e-12,148;UBERON:0002067,4.56e-09,9;UBERON:0004016,4.56e-09,9;UBERON:0010083,4.56e-09,9;UBERON:0002204,5.66e-09,167;UBERON:0001637,2.10e-08,42;UBERON:0003509,2.10e-08,42;UBERON:0004572,2.10e-08,42;UBERON:0004573,7.51e-08,33;UBERON:0004571,7.51e-08,33;UBERON:0000075,9.89e-08,16;UBERON:0001758,3.61e-07,6;UBERON:0003672,3.61e-07,6;UBERON:0011137,3.69e-07,14;UBERON:0000412,4.46e-07,3;UBERON:0001992,4.46e-07,3;UBERON:0002100,7.93e-07,199;UBERON:0004237,8.36e-07,10;UBERON:0004695,8.36e-07,10;UBERON:0002111,8.36e-07,10;UBERON:0004178,8.36e-07,10 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,2.10402800032079,0.994192127183747,1.34465029290355,0.602694528023977,4.38186054232424,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0.722878304769133,0,0.144846518960824,0,0,1.13441780596881,0,0.351339142772504,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.379891534993739,4.76673050927588,0.573673241497627,0,0,0,0,0,0,0,0.302714855289863,0,1.87457145467037,0.624320153660641,1.71141546463335,1.04614076386261,0.23486899728753,1.29498355494505,1.12360645361799,0.408308342509787,1.35117749042945,0.413303124703062,5.94001428641027,2.47266929278557,0.910161361938026,1.43723628363248,0.336672227908132,1.37630371859161,1.10825646193673,2.19488810440419,2.45190236639216,1.50238058906597,0,3.58779271377724,2.77624605464138,0.847727604638247,3.90118424909723,4.94652140344507,1.8034837803194,0.930584281657949,2.02531598689519,0.292311015483596,3.5340728394176,3.40584624976508,0.646584227275248,1.77504796258307,3.52632343796741,1.3564847384839,0.193260853163297,0,0.286804595389004,0,0,0,0.207322110030741,0,0,4.69348596989448,2.57296375277154,5.52539685409922,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,3.58389135841357,0,1.44331342025273,0.579652024875384,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,2.01835951821649,0,1.3200891447771,2.97324946242889,0,0.845302752556,6.64845291462176,1.04007436911366,0,0,0.266422179016099,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.958499421966331,0,0,4.05387658669222,1.64381058040307,3.76028022803781,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.736148950314839,1.50051156317903,7.05289061619313,1.66376689224646,2.49800584316026,1.10391690523754,0.585707074963566,0,0,0,0,1.47495334833363,3.90976265106373,10.7690636604507,1.71571711905428,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,3.85524234506639,0.532685175939381,1.88892458831761,2.59627214591811,1.16210378459959,0,0.200506470303285,0,1.26295892981067,7.10155555226196,1.83574180943194,0,0,0,0,0,0,0,0,1.54227252690289,0.541892875087706,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,1.6068392984416,2.80345083047154,0.308097234229289,0,2.48105830472155,0.214840489736547,1.0151168573996,0.852266274161009,3.38321735457602,0,0.192190067365106,0,0,1.85938219718914,5.35180989612088,5.5762981612848,0.924100740528266,0,5.21959795245044,1.29726953372744,0.715624433709956,0,1.2655176988749,0.571890581771475,3.83846686967001,1.71175595213568,2.22742273548156,0,0.179872457583315,0.274537029736055,0.824686816419805,1.01091240786658,0,0.421258456238981,0.975267478179181,2.19342140668156,2.11300293513511,1.22849920267187,1.41405431953713,0,1.65409603063837,0.66343897524122,1.31535265576129,0,0.655894752046633,1.42037263873893,0.6196469961995,1.12678241012897,1.00387946542836,0.687743287091848,2.1400263088875,2.48332744849418,0,0.658589785919804,0.75894634753143,1.74967360122491,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,1.00177834520615,0.16480387422676,0,0,0,0,0.20453736500431,0,4.97663340258892,0.0898683511473268,0.179021174675609,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92354946143911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0,0.971121518136371,0,0,0.61214552326098,0.126373159256976,0.751617097072463,0.103688191397247,0,1.323967823502,0,1.19472429772959,0,1.38674673013139,0,0,0,0,0.171986032471617,0,0,0,0.193978032976839,0,0,0.411125773940253,0,0.316553979779393,0,0.320635281006135,0,0,0,0,0,0.14405479798815,0.621262677827163,0,0.135904206073614,0.523014231561666,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0.303747783290123,0,0,0,0.105600336519406,0.35857467866569,0,0,0,0,2.71499800876856,0.864221491201268,0.326587360109409,0,0,6.64513284963145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.1251909307065,0.573409195690071,0,0.0620964029413835,0,0,0.151649117541648,0.285465333544967,0,0,1.01444720027578,0.149254802886874,0.934853239388898,0.554805861502613,0.568209015825267,1.76097531226803,2.66943366478961,0.915360273587694,1.20984739010591,0.310874401165561,0.295710299979268,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| |||
|short_description=p@chr5:98105523..98105543,+ | |||
}} |
Revision as of 06:39, 22 January 2014
Short description: | p@chr5:98105523..98105543, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:98105523..98105543, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.25e-20 | 76 |
muscle precursor cell | 6.95e-20 | 58 |
myoblast | 6.95e-20 | 58 |
multi-potent skeletal muscle stem cell | 6.95e-20 | 58 |
skin fibroblast | 3.92e-19 | 23 |
muscle cell | 1.94e-16 | 55 |
smooth muscle cell | 6.84e-16 | 43 |
smooth muscle myoblast | 6.84e-16 | 43 |
somatic stem cell | 3.54e-14 | 433 |
multi fate stem cell | 4.09e-14 | 427 |
electrically responsive cell | 4.48e-14 | 61 |
electrically active cell | 4.48e-14 | 61 |
vascular associated smooth muscle cell | 1.37e-13 | 32 |
stem cell | 1.68e-13 | 441 |
mesodermal cell | 1.14e-08 | 121 |
fibroblast of periodontium | 3.61e-07 | 6 |
hair follicle dermal papilla cell | 4.46e-07 | 3 |
stem cell of epidermis | 4.46e-07 | 3 |
aortic smooth muscle cell | 8.36e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.12e-07 | 5 |
myotonic disease | 5.12e-07 | 5 |
muscle tissue disease | 5.12e-07 | 5 |
myopathy | 5.12e-07 | 5 |
muscular disease | 5.12e-07 | 5 |
myotonic dystrophy | 5.12e-07 | 5 |