FFCP PHASE1:Hg19::chr5:148960902..148960929,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389337 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34430 | |||
|TSSclassifier=strong | |||
|UniProt=A1IGU5 | |||
|association_with_transcript=-106bp_to_ENST00000333677_5end | |||
|description=CAGE_peak_3_at_ARHGEF37_5end | |||
|id=chr5:148960902..148960929,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.06e-09!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-39!115;UBERON:0004111!4.22e-19!241;UBERON:0000477!6.06e-17!286;UBERON:0000468!2.12e-15!659;UBERON:0000467!4.21e-14!625;UBERON:0000480!6.58e-14!626;UBERON:0000481!2.47e-13!347;UBERON:0000483!1.05e-12!309;UBERON:0000064!2.19e-12!219;UBERON:0000119!2.79e-12!312;UBERON:0004121!4.32e-12!169;UBERON:0003075!8.49e-12!86;UBERON:0007284!8.49e-12!86;UBERON:0001049!1.15e-11!57;UBERON:0005068!1.15e-11!57;UBERON:0006241!1.15e-11!57;UBERON:0007135!1.15e-11!57;UBERON:0000033!1.77e-11!123;UBERON:0000153!2.29e-11!129;UBERON:0007811!2.29e-11!129;UBERON:0000924!2.44e-11!173;UBERON:0006601!2.44e-11!173;UBERON:0002050!5.50e-11!605;UBERON:0005423!5.50e-11!605;UBERON:0000922!5.81e-11!612;UBERON:0000025!6.37e-11!194;UBERON:0000062!1.09e-10!511;UBERON:0002346!1.14e-10!90;UBERON:0000923!1.14e-10!604;UBERON:0005291!1.14e-10!604;UBERON:0006598!1.14e-10!604;UBERON:0002532!1.14e-10!604;UBERON:0002616!9.72e-10!59;UBERON:0004119!1.14e-09!169;UBERON:0000925!1.14e-09!169;UBERON:0006595!1.14e-09!169;UBERON:0000955!2.95e-09!69;UBERON:0006238!2.95e-09!69;UBERON:0000475!3.62e-09!365;UBERON:0005743!2.52e-08!86;UBERON:0000073!4.07e-08!94;UBERON:0001016!4.07e-08!94;UBERON:0000161!9.55e-08!35;UBERON:0001017!9.70e-08!82;UBERON:0003080!1.54e-07!42;UBERON:0002780!3.55e-07!41;UBERON:0001890!3.55e-07!41;UBERON:0006240!3.55e-07!41;UBERON:0003056!5.18e-07!61;UBERON:0001007!6.32e-07!155;UBERON:0001555!6.32e-07!155;UBERON:0007026!6.32e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.55e-11;114!UBERON:0004732;2.70e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.61e-42,114;UBERON:0000073,3.44e-09,53;UBERON:0002616,3.44e-09,53;UBERON:0004111,4.31e-09,240;UBERON:0010371,2.01e-08,104;UBERON:0001049,2.54e-08,56;UBERON:0005068,2.54e-08,56;UBERON:0006241,2.54e-08,56;UBERON:0007135,2.54e-08,56;UBERON:0004119,7.85e-08,160;UBERON:0000925,7.85e-08,160;UBERON:0006595,7.85e-08,160;UBERON:0003075,2.57e-07,82;UBERON:0007284,2.57e-07,82;UBERON:0004732,3.22e-07,13;UBERON:0011216,3.68e-07,223 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0,0.730310090387373,0,0.123121058076788,0.408001382488506,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0.154816123316076,0,1.8072355126695,0.739508020333575,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.434539556882471,0,0,0.189069634328136,0.443458794925128,0.527008714158756,1.57174890597255,2.18577172975525,4.07862887062872,0,0,0,0.238490624305342,0,0,0.39752481473341,0.860234595106124,0.694281003215189,0.56530794192401,0.838998872419812,0.825354125820202,0.626984899610432,1.03366703667732,1.06729878806013,0.66944122552934,0.402829317109147,0.760272105718513,1.70843440283719,0,0.81014194788176,0.535798369704479,0.22452937262617,0.675668882899933,0,0,0.366403487860815,0,0,3.05265836499774,0,0.379891534993739,0,0.286836620748814,0.354668382198357,1.12135520028461,1.06748995729705,0.74000264525148,0.622422070799533,1.0776853765575,0.326923806226917,0.302714855289863,0,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0.340296549480063,0.179389635688862,0.213557388818567,0,0.300091096084402,0,0.515281080091258,0,0.506328996723799,0,0,0,0.484938170456436,0,0,0,1.35282597214308,1.09098448236334,1.43402297694502,0,0.132529768321485,0,0,0,0,0,0,0,0.464367928031979,0,0.354920400119532,1.18009283054671,0.482022059766964,0.330881918197182,0.435758888184812,0.474541238222193,0.404493924480493,0,0.769494313892781,1.4763109092493,1.40241773803446,0.8231480226628,1.47008711385542,1.26755034821831,0,0,0,0.122988438543114,0.343135620597051,2.74375713521564,0,0.703702806881416,0.555530670951178,0,0,0,0.579652024875384,0,0.433099343283221,0.462985512576611,1.14152491340759,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0.567100388969546,0.53735113621709,0.581267877027924,1.91691339582606,0,0,0,0.144119953416961,0,0,0,0,0,0.411309970813294,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0,0.355391948742546,0,0.602878754119172,0,1.29964888536674,0,0,0,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0.535286966391485,0.473107245101804,0.819989904948992,0.601892199455438,0,0,0,0.184369168541703,0,0.195801157462741,0.343143423810856,0,0,0,2.12189300012382,0,0.604780586659361,0.248107807818777,1.38115775959256,0,0.384417447767103,1.02341449813341,0.160853921143607,0,0,0,0,0,0,0.120859449591622,1.80455823272956,2.76242966807689,0,0.182091168006717,1.04899531967539,0.902399225814824,0.847168708148562,0,2.92278449306521,0.316654886678627,0,0,0,1.54227252690289,0.541892875087706,0,1.01950509218015,0.831076008928724,1.11937377361089,9.64743457242112,9.15024078587152,0.512900250232778,0.328014645699706,0.325378394664303,0.9273691048295,0,0,1.72279661398852,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0,0,0,0,0.890320356467374,1.98341898433174,0.384380134730212,1.91419068741876,2.52894452138875,0,0,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0.359744915166629,0,0,0.202182481573316,1.58510321173008,0,0,0.731140468893853,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0,0,0,0,0,0.633322905892992,0,0.379473173765715,0,1.15466535270614,0,1.08890984861323,1.50630081242847,1.72202149068492,3.36942951335251,3.99087138183008,1.83778720165568,1.01489521846434,3.0585488285695,2.84823593587081,0.476463550915578,0,1.94541993357815,0,4.75875105776562,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0.879049075631364,0,0,0,12.6534576910976,4.15750553165694,6.14321404198464,1.9882952955326,2.81338832821025,0,0,0,3.98495976502139,1.10513566212459,0,0.20453736500431,0,0.622079175323615,0.629078458031288,0,0,5.32674390439441,0,1.11136990144637,0.969332746095218,1.02044907978036,0,0,2.71125999988207,1.44999915086959,0.796554137998498,0,0.709163045303809,1.03423011972439,0,0.347249989866585,0,1.4471572635049,3.05163472634166,4.97606669690511,3.84211904639612,0.658156191461918,0.980446171670911,3.90386483980089,2.6932590476329,0,0,0.0897576444097721,0,2.87101043758728,0.457987967009312,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,1.99052386215701,3.27292988662355,1.22206028986725,0,0,0,0.808813595768125,0.802577647298789,0,0,0.782658475728359,0,13.0212852940299,1.20990716048664,0,0.821425535170343,0.901940516486955,0.103688191397247,0,0,0.313932918407225,0,0.284609546029793,0,0.694238953340524,1.17590876897253,1.39294730528644,2.44617335538842,1.20390222730132,0.0967563312890851,0.292357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| |||
|short_description=p3@ARHGEF37 | |||
}} |
Revision as of 08:14, 22 January 2014
Short description: | p3@ARHGEF37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARHGEF37_5end |
Coexpression cluster: | NA |
Association with transcript: | -106bp_to_ENST00000333677_5end |
EntrezGene: | ARHGEF37 |
HGNC: | 34430 |
UniProt: | A1IGU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.61e-42 | 114 |
regional part of nervous system | 3.44e-09 | 53 |
regional part of brain | 3.44e-09 | 53 |
anatomical conduit | 4.31e-09 | 240 |
ecto-epithelium | 2.01e-08 | 104 |
neural tube | 2.54e-08 | 56 |
neural rod | 2.54e-08 | 56 |
future spinal cord | 2.54e-08 | 56 |
neural keel | 2.54e-08 | 56 |
endoderm-derived structure | 7.85e-08 | 160 |
endoderm | 7.85e-08 | 160 |
presumptive endoderm | 7.85e-08 | 160 |
neural plate | 2.57e-07 | 82 |
presumptive neural plate | 2.57e-07 | 82 |
segmental subdivision of nervous system | 3.22e-07 | 13 |
organ system subdivision | 3.68e-07 | 223 |