FFCP PHASE1:Hg19::chr6:43745909..43745939,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7422 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12680 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000493786_5end | |||
|coexpression_cluster_id=C356 | |||
|description=CAGE_peak_15_at_VEGFA_5end | |||
|id=chr6:43745909..43745939,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000306;3.60e-14;4!CL:0002547;3.60e-14;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,4.12e-14,4;CL:0002547,4.12e-14,4 | |||
|ontology_enrichment_development_v019=UBERON:0003099;1.50e-14;1!UBERON:0003852;1.50e-14;1!UBERON:0003104;4.42e-07;31 | |||
|ontology_enrichment_disease=DOID:162!1.86e-07!235;DOID:0050687!1.88e-07!143;DOID:14566!2.25e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:2513;1.50e-14;1!DOID:3571;1.50e-14;1!DOID:154;3.95e-08;2!DOID:4236;3.95e-08;2!DOID:3451;6.35e-08;2!DOID:4159;6.35e-08;2!DOID:0060122;6.35e-08;2!DOID:3350;6.35e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,1.23e-14,1;DOID:2513,1.84e-14,1;DOID:154,3.82e-08,2;DOID:4236,3.82e-08,2;DOID:3350,5.74e-08,2;DOID:3451,7.03e-08,2;DOID:4159,7.03e-08,2;DOID:0060122,7.03e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;5.80e-15;1!UBERON:0003831;5.80e-15;1!UBERON:0003898;5.80e-15;1!UBERON:0004830;5.80e-15;1!UBERON:0003830;5.80e-15;1!UBERON:0005175;5.80e-15;1!UBERON:0001774;5.80e-15;1!UBERON:0001103;5.80e-15;1!UBERON:0005705;1.50e-14;1!UBERON:0008193;1.50e-14;1!UBERON:0010912;1.50e-14;1!UBERON:0002514;1.50e-14;1!UBERON:0003457;1.50e-14;1!UBERON:0008907;1.50e-14;1!UBERON:0008001;1.50e-14;1!UBERON:0007213;1.50e-14;1!UBERON:0009891;1.50e-14;1!UBERON:0007914;1.50e-14;1!UBERON:0007375;1.50e-14;1!UBERON:0003323;1.50e-14;1!UBERON:0010258;1.50e-14;1!UBERON:0005253;1.50e-14;1!UBERON:0007842;1.50e-14;1!UBERON:0002397;1.50e-14;1!UBERON:0003113;1.50e-14;1!UBERON:0003277;1.50e-14;1!UBERON:0001709;1.50e-14;1!UBERON:0002244;1.50e-14;1!UBERON:0005620;1.50e-14;1!UBERON:0010364;1.50e-14;1!UBERON:0004288;1.50e-14;1!UBERON:0004797;3.60e-14;4!UBERON:0000415;3.60e-14;4!UBERON:0007240;3.60e-14;4!UBERON:0005742;3.60e-14;4!UBERON:0005734;3.60e-14;4!UBERON:0004664;3.60e-14;4!UBERON:0004663;3.60e-14;4!UBERON:0005090;3.95e-08;2!UBERON:0001630;3.95e-08;2!UBERON:0004089;6.35e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,6.22e-15,1;UBERON:0003831,6.22e-15,1;UBERON:0003898,6.22e-15,1;UBERON:0004830,6.22e-15,1;UBERON:0003830,6.22e-15,1;UBERON:0005175,6.22e-15,1;UBERON:0001774,6.22e-15,1;UBERON:0001103,6.22e-15,1;UBERON:0010084,6.22e-15,1;UBERON:0005705,7.13e-15,1;UBERON:0008193,7.13e-15,1;UBERON:0010912,7.13e-15,1;UBERON:0002514,7.13e-15,1;UBERON:0003457,7.13e-15,1;UBERON:0008907,7.13e-15,1;UBERON:0008001,7.13e-15,1;UBERON:0007213,7.13e-15,1;UBERON:0009891,7.13e-15,1;UBERON:0007914,7.13e-15,1;UBERON:0009292,7.13e-15,1;UBERON:0003099,7.13e-15,1;UBERON:0007375,7.13e-15,1;UBERON:0003323,7.13e-15,1;UBERON:0010258,7.13e-15,1;UBERON:0007842,7.13e-15,1;UBERON:0009494,7.13e-15,1;UBERON:0010042,7.13e-15,1;UBERON:0010045,7.13e-15,1;UBERON:0010259,7.13e-15,1;UBERON:0010359,7.13e-15,1;UBERON:0009526,7.13e-15,1;UBERON:0002397,7.13e-15,1;UBERON:0003113,7.13e-15,1;UBERON:0003277,7.13e-15,1;UBERON:0001709,7.13e-15,1;UBERON:0004066,7.13e-15,1;UBERON:0002244,7.13e-15,1;UBERON:0005620,7.13e-15,1;UBERON:0004362,7.13e-15,1;UBERON:0010364,7.13e-15,1;UBERON:0010046,7.13e-15,1;UBERON:0005868,7.13e-15,1;UBERON:0007238,7.13e-15,1;UBERON:0004288,7.13e-15,1;UBERON:0004068,7.13e-15,1;UBERON:0010334,7.13e-15,1;UBERON:0003852,7.13e-15,1;UBERON:0010253,7.13e-15,1;UBERON:0000415,4.12e-14,4;UBERON:0007240,4.12e-14,4;UBERON:0005742,4.12e-14,4;UBERON:0005734,4.12e-14,4;UBERON:0004664,4.12e-14,4;UBERON:0004663,4.12e-14,4;UBERON:0004797,1.85e-08,7;UBERON:0005090,4.09e-08,2;UBERON:0001630,4.09e-08,2;UBERON:0005253,4.38e-08,2;UBERON:0004089,4.38e-08,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0.313454721478088,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0.752969358170419,0.272906150057846,0.449446968890169,0.306083892370903,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0.580418477257168,0.56738522469114,1.24564449799115,0.502497330513487,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,1.45990461090791,0,0,0,0,0,0.741568885568859,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,1.32409180813219,1.14734648299525,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0.624320153660641,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0.505008341862199,0.250237039743928,0.277064115484183,0,0,0,0,0,0.640672166455702,0.635795703478686,0,0.103052529238439,0,0.18611685633159,0,0,0,0.368199594569197,0.161646056818812,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0.904902010304444,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0.460385919864187,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0,0,0,0,0,0.920809889358963,0.114814448164607,0.182091168006717,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0.462145851343933,0,0,0,0,0,0.0890320356467374,0.661139661443912,0,1.02090169995667,1.0115778085555,0,0.62962469366128,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0.487426979262569,0,0,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0.371606350251437,0,0.284567373393656,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,0.23874448473769,0,0.614321404198464,0,0,0.556543525114529,0,0.211125408127993,0,0,0,0.102268682502155,0,1.24415835064723,0.0898683511473268,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0.262379999988587,0,0.1137934482855,0,0,0,0.583209226766509,0.520874984799877,0,0.361789315876224,1.52581736317083,0,0,0,0.21787692703798,0.139423744278603,0,0,0.23056390438806,0.0897576444097721,0.325942115766024,0.957003479195758,0,0,0,0.31396051279005,0,0,0,0.335643173951685,0.189753732724185,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0,0,2.40773294189637,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0.569219092059585,0.416024019039416,0,0.783939179315021,0.0870592065804026,0.52418000472609,0.51595809741485,0.0967563312890851,0.0730893170861856,0,0,0.176512253383001,0.225980740780532,0,0,0.0633107959558787,0,0.400794101257669,0,0,0.576361668616424,0,0.343189995723929,0.864328787928898,0,0.471388069233591,0,0,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0.399358000997982,0.429226048136571,0,0.268733889946905,1.44119953416961,0,0,0.164831716762333,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.157611414598396,0.209818352539992,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0.410462603746695,0.170388021785422,0,0,0,0,0.39669780522807,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0.157054096250234,0,0,0.3755727921195,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0.228840068396924,0.453692771289717,0.15543720058278,0.147855149989634,0.159296767163702,0,0.155262956876259,0.414706207840855,0.53168342911599,0.521745061811734,0.450772826991655,0.761610424337591,0.406870733204662,0,0.322231671127465,0.928067519756987,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0.163565394255844,2.94848863961771,0,0,0,0,0.516644938982447,0.567515953566836,0.184105950251841,0.139879507719444,0,0,0,0.471797825567689,0,0,0.850299680406731,0.371807292777007,0,0,0.23658523500376,0,1.76337971845342,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0.596748666348824,0.0752103283492573,0.80682027481408,0,0.523813388962845,0.163771917510097,0.295712172434091,0,0,0.206686796501184,0,0,0.548257766857182,0,0.351742488719241,0.127762427639595,0,0,0,0,0,0.115233987555779,0.685952037749674,0,0,0.118193840883968,0.111231401892069,0.235479278551542,0,0.280272163313789,0,1.51149313853035,19.110067515482,0,0.158013611732727,0,0,0,0.62164849248911,0,0,0,0.118332000730565,0.0852134047591577,0,0,0.62041277132864,0,0.111855431797792,0.294450700845729,0.365753774946808,0,0,0,0,0,0.198950775161368,0,0,0,0,0.154348316215889,0.218559560503957,0.940634592723046,0.245148321753905,0,0,0,0,0.509781344063451,0,0.193373663920732,0.0999411559249289,0.178553938605658,0,0.0802413666891683,0.730336388246517,0.458729283404541,0,0,0,0.436350690340377,1.0580536810308,0,0,0.432626562123789,0,0.109265571963696,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0.20686599172379,0,0.714193294391221,0,0.0620747142958579,0.112131862580613,0.12729431655633,0.808468755832877,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,0,0.122241444182866,0.813792356631477,0.665756774185513,0,0 | |||
|short_description=p15@VEGFA | |||
}} |
Revision as of 12:03, 22 January 2014
Short description: | p15@VEGFA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_VEGFA_5end |
Coexpression cluster: | C356_renal_Smooth_Chondrocyte_thyroid_serous_Small_mesenchymal |
Association with transcript: | 0bp_to_ENST00000493786_5end |
EntrezGene: | VEGFA |
HGNC: | 12680 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 4.12e-14 | 4 |
fibroblast of the aortic adventitia | 4.12e-14 | 4 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 1.23e-14 | 1 |
basal cell carcinoma | 1.84e-14 | 1 |
mixed cell type cancer | 3.82e-08 | 2 |
carcinosarcoma | 3.82e-08 | 2 |
mesenchymal cell neoplasm | 5.74e-08 | 2 |
skin carcinoma | 7.03e-08 | 2 |
skin cancer | 7.03e-08 | 2 |
integumentary system cancer | 7.03e-08 | 2 |