FFCP PHASE1:Hg19::chr6:44218018..44218055,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3326 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5258 | |||
|TSSclassifier=strong | |||
|UniProt=A8K3W9 | |||
|association_with_transcript=0bp_to_AK290734_5end | |||
|description=CAGE_peak_5_at_HSP90AB1_5end | |||
|id=chr6:44218018..44218055,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.60e-16!235;DOID:14566!2.68e-16!239;DOID:0050687!2.31e-12!143;DOID:305!1.24e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.29e-10,235;DOID:14566,1.32e-09,239;DOID:0050687,1.46e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.87e-13!57;UBERON:0005068!5.87e-13!57;UBERON:0006241!5.87e-13!57;UBERON:0007135!5.87e-13!57;UBERON:0003080!5.68e-12!42;UBERON:0007023!1.47e-11!115;UBERON:0002780!1.49e-11!41;UBERON:0001890!1.49e-11!41;UBERON:0006240!1.49e-11!41;UBERON:0002020!1.27e-10!34;UBERON:0003528!1.27e-10!34;UBERON:0001017!2.79e-10!82;UBERON:0005743!8.28e-10!86;UBERON:0000073!1.16e-09!94;UBERON:0001016!1.16e-09!94;UBERON:0000955!2.50e-09!69;UBERON:0006238!2.50e-09!69;UBERON:0002619!2.52e-09!22;UBERON:0002616!5.72e-09!59;UBERON:0002791!5.75e-09!33;UBERON:0001869!1.78e-08!32;UBERON:0002346!1.81e-08!90;UBERON:0001893!1.87e-08!34;UBERON:0000956!2.70e-08!25;UBERON:0000203!2.70e-08!25;UBERON:0001950!4.37e-08!20;UBERON:0003075!1.36e-07!86;UBERON:0007284!1.36e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.85e-09;41!UBERON:0001890;2.85e-09;41!UBERON:0002619;3.30e-09;22!UBERON:0003528;7.71e-09;34!UBERON:0002020;7.71e-09;34!UBERON:0002791;1.67e-08;32!UBERON:0000073;4.00e-08;53!UBERON:0002616;4.00e-08;53!UBERON:0001869;1.12e-07;32!UBERON:0001950;1.46e-07;20!UBERON:0000956;1.83e-07;25!UBERON:0000203;1.83e-07;25!UBERON:0000922;4.99e-07;49!UBERON:0001893;9.33e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.83e-15,56;UBERON:0005068,2.83e-15,56;UBERON:0006241,2.83e-15,56;UBERON:0007135,2.83e-15,56;UBERON:0001017,9.10e-14,81;UBERON:0000073,1.14e-13,53;UBERON:0002616,1.14e-13,53;UBERON:0002780,9.30e-13,41;UBERON:0001890,9.30e-13,41;UBERON:0003080,9.30e-13,41;UBERON:0006240,9.30e-13,41;UBERON:0007023,2.06e-12,114;UBERON:0001016,5.08e-12,89;UBERON:0000955,6.69e-12,68;UBERON:0006238,6.69e-12,68;UBERON:0002346,2.29e-11,86;UBERON:0003528,4.49e-11,34;UBERON:0002020,4.49e-11,34;UBERON:0003075,4.52e-10,82;UBERON:0007284,4.52e-10,82;UBERON:0002791,1.60e-09,32;UBERON:0002619,2.15e-09,22;UBERON:0001893,1.53e-08,34;UBERON:0001869,1.97e-08,32;UBERON:0011216,3.43e-08,223;UBERON:0001950,9.68e-08,20;UBERON:0000956,1.27e-07,25;UBERON:0000203,1.27e-07,25 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0.218441372130172,0.527533956456907,0.37129905888014,0.331397375727916,0.672325146451775,0.602694528023977,0,2.43966399395253,0,0,0,0.286235987131057,0.821246550437305,0.251085279189606,1.14620108621927,2.05251473624864,1.57421562627358,0.393364276848904,0,0.619264493264304,0,0.30120591877825,0.369754010166788,0.619737604642413,0.995184627411951,0,0.553995408531877,1.40381113229099,1.51907609501096,0,0,0,0,1.13362783106643,0.242584061187816,0.929716147622738,0.822335776043652,1.54853185447552,0.28769239232215,0.256160706529101,0,1.03423704220986,3.22742341791913,0,0.188242339542605,1.09162460023138,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0,2.26954089876456,2.4912889959823,1.25624332628372,1.0429658368404,0.65156653411535,0,0.368277635987565,0.316462387440884,0,0.425208599930087,0,0,0,0.32145117339416,0,0.19891667719909,0.182664153764634,0,0,0,1.28019066769952,0,0,0,0,2.27685187643779,0.587237189370939,0.764546456250458,0,0,0.526768169550154,0.983548850569165,0.393010762749165,1.02800749499755,0.334372990781356,0,0,0,0.111410456885174,0,0,0,0.512365278902701,0.520237390239513,0.493313713811028,0.276350017785848,0.289803085735052,0.593146252648242,0,0,0.226618685395132,0,0,0.253019692019503,0,0,0,0,0.255973222308837,0,0,0,0.403213486449465,0.802320587350522,1.01377082717959,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0.378139268656271,0.443458794925128,0.87834785693126,0.327447688744282,0,0,0,0.522389211897802,1.06366368415092,0.476981248610684,0,0,0.79504962946682,0,0.347140501607594,0.56530794192401,0.419499436209906,1.37559020970034,1.25396979922086,0,0.35576626268671,0,0,0,1.46437234528902,0,0,0.625098097988558,0.673588117878509,1.12611480483322,1.53316637465883,0.949265659568129,0.916008719652036,0,0,0,1.49091585508596,0.759783069987479,0.529636723252875,0.286836620748814,1.41867352879343,0.560677600142307,0,1.48000529050296,0,0.269421344139376,0.163461903113459,0,0,0,0.312160076830321,0,0.747243402759005,0.352303495931295,0,0.140450806702248,0,1.47401180774122,0.309977343527296,0,0.494533858557114,0,0,0.673344455816265,0.250237039743928,0.277064115484183,0.438977620880838,0,0.150238058906597,0.113432183160021,0,0.427114777637135,0.423863802319124,0.600182192168805,0.103052529238439,0,0.37223371266318,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0.818238361772504,0,3.04934265323988,1.45782745153634,0.464775771478074,1.55491582523056,2.52320850875628,2.18986415445498,0,0,0,0.464367928031979,0,1.53798840051797,2.69735504124963,2.16909926895134,1.21323370005633,0.871517776369625,1.18635309555548,2.42696354688296,1.37355025587742,1.15424147083917,0,0,0,0,0,0,4.13552934676983,0,0.245976877086227,0.343135620597051,0.439001141634502,0,0.603173834469785,0.370353780634118,0,0,0,0.115930404975077,0,1.15493158208859,1.85194205030644,1.33177906564219,0.790204397959275,0.858486162094873,0,0,0.297262324577456,0,0.671928512795438,0.425325291727159,0.179117045405697,0.290633938513962,0,0.492663237895943,0.528290604079356,0.621984346622316,0.288239906833923,0.37872730027914,0,0.381988425558278,0,0,0.616964956219941,0.901029173531752,0,0,0,0.07333828582095,0,0,1.690605505112,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,1.74306691720059,1.09970290300263,2.43247561282381,0.502257091432126,4.21667878966063,0,1.14861935834114,0,0.579125226670317,0.205476322550383,0.358121926479791,1.56919201590938,0.591092280605782,0.862510299438069,1.15508732651774,0.254094624222463,0,0,0.502548796003046,1.27587750330633,0,0,0,0.49076596687656,0,0.271265023699736,1.87173775377726,1.42743191037729,1.41932173530541,1.52283839490527,0,0,0,0.664225598535437,1.47495334833363,0.521301686808497,0,0,0.206768026122887,0.215714200818617,0.533637789017222,0,0,0.30239029332968,0,0.460385919864187,0.561320188866147,0.128139149255701,0,0.321707842287215,0,0.771048469013278,0.710246901252508,0.328508624055237,0,0.232420756919918,0.846016147141356,0.40101294060657,0.920809889358963,0.34444334449382,1.45672934405374,0.917870904715969,0,0.308061348417659,0,0,0,0,0.340187410553031,1.94324324491925,0,0,0,0,1.66215201785745,0.447749509444357,0,0,0.769350375349168,0.328014645699706,0.325378394664303,1.33953315142039,1.64825036673018,0.41254749960294,0,0,0,0.386682873168488,0.616194468458578,0.614014698904518,0.413509717453592,0.429680979473094,0.290033387828457,0.511359764496605,0.267096106940212,0.165284915360978,0.192190067365106,0.638063562472921,0.910420027699949,0,0.62962469366128,0,0,0.532306030317022,0,0.37064843820784,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0.42793898803392,0,0.78494864019923,0.179872457583315,1.09814811894422,0.589062011728432,0,0,0.421258456238981,0,0.731140468893853,0,0,0.848432591722276,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0,0.0962221127255121,0,0,1.31801321087491,0,0,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,2.02965735142199,0,2.45040215981032,2.9728508020115,0.577076851905779,0.355709216742071,1.11598390910176,2.59453182862662,0.191505370132367,1.05836791361941,2.59697552219644,0.561594356226918,2.28234679033192,0.94007937463814,5.01268954180134,1.01575066680962,0.481764225311099,0.80719882876419,0.851692475380653,0.343505344755765,1.53620382154229,0.223676107892416,0.333698283423817,1.75849285861836,1.11362469558097,0,1.6227340708559,0.66614393599564,0,0.748562161632879,0.439524537815682,3.39809460898638,0.557216921387392,1.42068073403207,1.67121139316383,0.593929361665277,0.307160702099232,3.97659059106519,6.89280140411512,0.111308705022906,1.48323486804084,3.3780065300479,4.18420775327246,0.552567831062295,2.01546198283421,0,0.492339221844278,0.311039587661807,0.359473404589307,0.716084698702437,0.511572370226872,0.986434056369336,0,0,3.87733098438087,1.11321717794222,0,2.08342208868187,0.262379999988587,2.17499872630438,1.0241410345695,2.2882828526349,1.65471377237555,0.344743373241465,2.04123229368278,0.347249989866585,0,4.22087535188928,0,1.99042667876204,2.06883333267483,1.75508317723178,0.21787692703798,0.139423744278603,0.846452843541768,0.227884111694002,1.61394733071642,0.179515288819544,1.84700532267414,1.27600463892768,0.366390373607449,0.533034776018635,0,3.92450640987562,1.99454018280188,0.225595660617181,1.56850027454192,1.1747511088309,0.948768663620925,0.476809736941136,2.10998064528027,0.326465616318295,0.424059214301822,0.216388639742091,1.99052386215701,0,3.66618086960175,0.296521128680622,0.617819694732514,0.313265848516366,0.202203398942031,2.40773294189637,1.87411556580271,2.18945747058799,0,1.45668227720456,1.18375320854817,3.62972148145992,0.91821828489147,0.189559738885464,0.300646838828985,0.207376382794494,1.99396161812156,0.330991955875499,0.313932918407225,0,0.853828638089378,0.416024019039416,1.04135843001079,1.27390116638691,0.261177619741208,1.57254001417827,1.0319161948297,2.03188295707079,1.38869702463753,2.46346371159628,0.193978032976839,0.264768380074501,2.25980740780532,1.37041924646751,1.39100228192093,0.316553979779393,1.56441106187842,0.320635281006135,0.426905989478705,1.19885765749278,1.00863292007874,0.458146384663663,0.686379991447858,0.14405479798815,0.621262677827163,1.17847017308398,1.35904206073614,0.418411385249333,0.407992870545287,0.577901179803038,1.20084057741958,6.16074205013969,0,0.429765441419957,2.36598618851383,3.6306712165393,1.3749625440701,5.74298419661451,1.79711100449092,1.71690419254628,1.11585728720936,0.53746777989381,0.720599767084807,3.49487848582361,3.38767683921062,3.37905019362782,3.03315947343832,0.295282444544246,1.77813997338147,5.56660782866512,9.67044183392187,2.08979093004525,1.92555211236127,4.15440338029185,0.2249738915515,0.77380195455795,0.789744236554321,0.670869375198532,0.709251365692784,0.104909176269996,0.316801009558219,1.6135860539956,0.383830394638891,0.714695326373367,5.95882773328889,2.034148301238,0,1.72844298240254,0.326587360109409,0,2.05231301873347,0.851940108927109,1.24643300672138,0.293104467356165,1.32506888912221,5.94701599263133,7.14056049410526,0.342173675768659,0.704815022316672,0.213574825135389,0,2.48543433208317,2.97699613087171,0.395223263795889,1.46151118057075,0,0,0.2506898940227,0.306345576763462,0.655745261419609,0,5.31640907980192,5.12510312588245,7.01069211956399,4.58727356552057,3.88251680378983,0.496771223531068,1.24513771442608,3.12451019905266,0.303298235083296,1.14186133417987,2.58792401667989,0.468334905806882,0,0,0.934853239388898,0,0,0,0,0,0.151230923763239,0.310874401165561,0.73927574994817,1.43367090447332,0,0.310525913752519,1.24411862352257,0.265841714557995,0,0,0.761610424337591,0.406870733204662,0.363697318405119,0.322231671127465,0,0,0.800055529326307,0.343395705182793,0,0,0.385239660814607,0.428883182749851,0.260994291965212,0.680117776536817,1.85217979459067,1.46842022703881,0.71635536432595,0.926404341482917,0,0.353378291891762,1.73622634443823,1.68942440653073,1.53744911152768,2.07258205038719,2.12701969324168,6.22162962682788,0.584580926518165,0.664324201566815,0.163565394255844,0.655219697692825,1.47463745252232,0.422624246717254,1.39991177098451,0.426766918776564,0.172214979660816,1.70254786070051,0.552317850755522,0,0,0.127894371303652,0.646948868380091,0.471797825567689,1.20130602011215,1.01839517972415,2.12574920101683,2.10690799240304,0.558644917973244,0.318004350653419,0.315446980005013,0,1.05802783107205,0,0.449604575675217,2.8339315265117,8.62022838908617,3.69209455633359,4.53729053199093,0.276629009856872,7.2664040534333,1.42769420259154,0.490738592505128,0.825788063434183,0.733714394086716,0.577628330751691,1.1441462864015,0,0.795664888465099,0.977734268540344,1.0085253435176,3.90757005616546,0.785720083444267,0.982631505060581,0.295712172434091,0.135075169236789,5.46754669029693,4.96048311602842,0.634158101939068,1.64092442705466,0,3.47347824872506,1.05522746615772,1.40538670403555,3.74991285114801,2.01770233331294,1.82089681270989,2.73194629621557,0.0887023701626388,0.576169937778896,0.171488009437418,0.815636795721981,0.855046056317038,1.18193840883968,1.89093383216518,1.02041020705668,2.35673384874003,1.40136081656895,7.30526976407596,0.431855182437243,2.38875843943525,0.285906176706625,1.42212250559454,2.44106993273063,1.39086617842064,0.801711364730253,2.27937780579341,0.3414369541879,1.38251932362818,0,0.946656005844523,0.255640214277473,2.54032230114557,0.4582137370881,0.31020638566432,0,1.00669888618013,0.294450700845729,0.243835849964539,12.30114790657,0.615976841137482,3.4794432940146,2.91426595835484,1.16969731731053,2.58636007709779,0.475680363110274,0.33883824611688,2.6385724018903,0.301925687133347,0.385870790539723,2.40415516554353,1.88126918544609,1.22574160876953,0.471353094203252,5.10402014498858,2.0793248022896,1.2679671827502,0.509781344063451,0.563903507879121,0.193373663920732,0.299823467774787,0.535661815816973,0.352894871715692,0.320965466756673,0,0.917458566809082,2.43677291357467,1.57771562193185,0.407948941145488,2.61810414204226,1.5870805215462,0.371995018166751,0,0,3.02799419604189,3.38723273087456,1.0135880080915,4.07955318967927,2.13773924212448,2.29737248837112,2.25636785363138,0.530450887527676,1.33982065078089,4.1458471972939,3.62015485516633,0.426467963801962,2.85677317756488,0.129177819672012,0.372448285775147,1.79410980128981,0.509177266225319,2.02117188958219,1.30630048738177,1.71116650542641,0.336760265072938,0.502055437748735,4.65724499164419,0.162806537221949,0.533636729388577,1.9307228228694,1.07790242527904,2.34640942403454,0,3.66206560484165,0.665756774185513,0.201273793591026,1.28227396921293 | |||
|short_description=p5@HSP90AB1 | |||
}} |
Revision as of 12:06, 22 January 2014
Short description: | p5@HSP90AB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HSP90AB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK290734_5end |
EntrezGene: | HSP90AB1 |
HGNC: | 5258 |
UniProt: | A8K3W9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.83e-15 | 56 |
neural rod | 2.83e-15 | 56 |
future spinal cord | 2.83e-15 | 56 |
neural keel | 2.83e-15 | 56 |
central nervous system | 9.10e-14 | 81 |
regional part of nervous system | 1.14e-13 | 53 |
regional part of brain | 1.14e-13 | 53 |
regional part of forebrain | 9.30e-13 | 41 |
forebrain | 9.30e-13 | 41 |
anterior neural tube | 9.30e-13 | 41 |
future forebrain | 9.30e-13 | 41 |
adult organism | 2.06e-12 | 114 |
nervous system | 5.08e-12 | 89 |
brain | 6.69e-12 | 68 |
future brain | 6.69e-12 | 68 |
neurectoderm | 2.29e-11 | 86 |
brain grey matter | 4.49e-11 | 34 |
gray matter | 4.49e-11 | 34 |
neural plate | 4.52e-10 | 82 |
presumptive neural plate | 4.52e-10 | 82 |
regional part of telencephalon | 1.60e-09 | 32 |
regional part of cerebral cortex | 2.15e-09 | 22 |
telencephalon | 1.53e-08 | 34 |
cerebral hemisphere | 1.97e-08 | 32 |
organ system subdivision | 3.43e-08 | 223 |
neocortex | 9.68e-08 | 20 |
cerebral cortex | 1.27e-07 | 25 |
pallium | 1.27e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.29e-10 | 235 |
disease of cellular proliferation | 1.32e-09 | 239 |
cell type cancer | 1.46e-07 | 143 |