FFCP PHASE1:Hg19::chr6:169632100..169632154,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1974 | |||
|description=CAGE_peak_at_chr6:169632100..169632154,- | |||
|id=chr6:169632100..169632154,- | |||
|ontology_enrichment_celltype=CL:0000055!5.92e-34!180;CL:0000057!6.13e-23!75;CL:0000187!1.72e-13!54;CL:0000680!1.10e-12!57;CL:0000056!1.10e-12!57;CL:0000355!1.10e-12!57;CL:0000183!3.28e-12!59;CL:0000393!1.69e-11!60;CL:0000211!1.69e-11!60;CL:0000192!4.43e-11!42;CL:0000514!4.43e-11!42;CL:0000359!2.16e-10!32;CL:0002334!7.53e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.06e-14;12!CL:0000134;9.70e-10;55!CL:0000048;1.44e-08;58!CL:0000723;5.53e-08;61!CL:0000359;1.62e-07;32!CL:0000057;1.76e-07;73!CL:0000192;6.33e-07;43!CL:0002595;7.92e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.89e-22,76;CL:0000723,3.90e-15,433;CL:0002334,2.69e-14,12;CL:0000048,3.31e-14,427;CL:0000034,3.37e-14,441;CL:0000187,1.27e-10,55;CL:0000680,1.26e-09,58;CL:0000056,1.26e-09,58;CL:0000355,1.26e-09,58;CL:0000192,7.35e-09,43;CL:0000514,7.35e-09,43;CL:0000393,9.68e-09,61;CL:0000211,9.68e-09,61;CL:0000136,5.72e-08,15;CL:0000359,9.35e-08,32;CL:0002320,9.94e-08,361;CL:0000134,1.17e-07,354;CL:0002595,6.82e-07,5;CL:0002494,8.62e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;6.33e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!7.88e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.15e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.93e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.07e-15!83;UBERON:0002329!3.07e-15!83;UBERON:0003077!3.07e-15!83;UBERON:0003059!3.07e-15!83;UBERON:0007282!3.07e-15!83;UBERON:0009618!3.07e-15!83;UBERON:0007285!3.07e-15!83;UBERON:0004290!5.01e-13!70;UBERON:0000486!5.68e-13!82;UBERON:0001134!4.42e-12!61;UBERON:0002036!4.42e-12!61;UBERON:0003082!4.42e-12!61;UBERON:0002385!1.03e-11!63;UBERON:0001015!1.03e-11!63;UBERON:0000383!1.03e-11!63;UBERON:0000475!2.63e-11!365;UBERON:0002199!5.75e-10!45;UBERON:0002416!5.75e-10!45;UBERON:0003102!8.17e-10!95;UBERON:0004872!8.90e-09!84;UBERON:0007100!1.30e-08!27;UBERON:0000948!2.69e-08!24;UBERON:0005498!2.69e-08!24;UBERON:0004140!2.69e-08!24;UBERON:0009881!2.69e-08!24;UBERON:0004141!2.69e-08!24;UBERON:0003084!2.69e-08!24;UBERON:0007005!2.69e-08!24;UBERON:0004139!2.69e-08!24;UBERON:0004291!2.69e-08!24;UBERON:0005256!3.19e-08!143;UBERON:0002097!1.54e-07!40;UBERON:0004573!2.25e-07!33;UBERON:0004571!2.25e-07!33;UBERON:0001637!2.92e-07!42;UBERON:0003509!2.92e-07!42;UBERON:0004572!2.92e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.51e-09;9!UBERON:0000042;5.51e-09;9!UBERON:0003688;2.16e-08;6!UBERON:0002358;2.16e-08;6!UBERON:0003684;2.16e-08;6!UBERON:0001178;2.16e-08;6!UBERON:0002199;2.49e-08;46!UBERON:0002416;2.49e-08;46!UBERON:0001013;1.16e-07;14!UBERON:0001135;2.55e-07;15!UBERON:0004573;3.06e-07;33!UBERON:0004571;3.06e-07;33!UBERON:0000947;4.92e-07;21!UBERON:0010191;4.92e-07;21!UBERON:0002384;5.66e-07;198!UBERON:0003834;7.92e-07;5!UBERON:0001533;7.92e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.30e-11,46;UBERON:0002416,1.30e-11,46;UBERON:0007524,1.18e-10,73;UBERON:0003077,5.07e-10,72;UBERON:0007285,5.07e-10,72;UBERON:0002329,1.21e-09,71;UBERON:0003059,1.21e-09,71;UBERON:0007282,1.21e-09,71;UBERON:0004290,1.21e-09,71;UBERON:0009618,1.21e-09,71;UBERON:0000486,1.41e-09,83;UBERON:0001134,3.99e-09,62;UBERON:0002036,3.99e-09,62;UBERON:0003082,3.99e-09,62;UBERON:0004872,7.40e-09,83;UBERON:0002385,1.42e-08,64;UBERON:0001015,1.42e-08,64;UBERON:0000383,1.42e-08,64;UBERON:0003688,2.24e-08,6;UBERON:0002358,2.24e-08,6;UBERON:0003684,2.24e-08,6;UBERON:0001178,2.24e-08,6;UBERON:0002097,3.00e-08,41;UBERON:0002384,4.77e-08,371;UBERON:0007503,6.09e-08,78;UBERON:0004573,8.20e-08,33;UBERON:0004571,8.20e-08,33;UBERON:0001013,8.50e-08,14;UBERON:0001637,1.70e-07,42;UBERON:0003509,1.70e-07,42;UBERON:0004572,1.70e-07,42;UBERON:0001135,2.36e-07,15;UBERON:0000948,3.31e-07,24;UBERON:0005498,3.31e-07,24;UBERON:0004140,3.31e-07,24;UBERON:0009881,3.31e-07,24;UBERON:0004141,3.31e-07,24;UBERON:0003084,3.31e-07,24;UBERON:0007005,3.31e-07,24;UBERON:0004139,3.31e-07,24;UBERON:0004291,3.31e-07,24;UBERON:0000947,4.02e-07,21;UBERON:0010191,4.02e-07,21;UBERON:0003834,6.82e-07,5;UBERON:0001533,6.82e-07,5;UBERON:0003102,7.75e-07,99 | |||
|phase1_expression=4.1786027232228,13.274232481241,4.93340414335899,5.00366491765652,18.3254048715188,13.0850778615055,5.06599756336621,1.89515962028049,1.82829939739887,0,0,0,0,0.495065411840187,1.32558950291166,4.70627602516243,4.82155622419182,4.38186054232424,2.92759679274304,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,2.9408389224012,0.361439152384566,0.50133791063589,0.724232594804119,0.795285947051099,0.486634870302636,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4182426957736,3.67228483827281,2.64818361626438,25.8152958673932,4.25602058638028,2.80338800071154,2.1349799145941,3.45334567784024,0,1.75123873690594,1.63461903113459,0.756787138224657,0.576175924479999,0,1.24864030732128,0,1.49448680551801,0.23486899728753,0.323745888736263,0.140450806702248,0.204154171254893,0.859840221182376,1.54988671763648,2.37600571456411,14.0942149688777,2.73048408581408,5.74894513452991,0,0.500474079487857,0.277064115484183,0.438977620880838,3.37136575378922,4.05642759047811,0.907457465280168,1.4351170855109,2.13557388818567,1.69545520927649,1.50045548042201,0.721367704669072,3.09168648054755,2.41951913231067,0.168776332241266,0.584622030967192,2.01947019395292,1.01254888506529,2.58633690910099,4.26011511019937,1.10827308050404,0.67824236924195,0,0,0.286804595389004,0.121973706129595,0,0.348581828608555,0,0.252320850875628,0.36497735907583,3.12899064659632,3.21620469096443,0,1.85747171212792,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,2.4694440679884,7.3504355692771,0,0,0,0,0,0.857839051492628,6.91426798074341,1.1240175325762,4.32274581370013,0,0.325808305310325,0,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0.763976851116555,0,0,1.02827492703324,1.8020583470635,0.285826432630578,0,3.48768055066624,0.22001485746285,1.68053230485111,0,0.845302752556,2.6593811658487,6.24044621468197,0,0,0.266422179016099,2.43062589218851,0,0,0,1.42156779497018,0,0,0,0.399891964728228,0,0,0,1.19812427745791,1.14861935834114,0,0,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,2.00068208423871,0.271265023699736,25.3724451067585,30.6897860731118,24.9169815753617,7.37990914454093,2.40756879782175,2.27407504055985,3.10419213877515,7.3064815838898,1.65932251687533,4.08352987999989,0.391602314925481,0.343143423810856,0,0,0,0,0,0.30239029332968,7.69134204238208,4.75732117192994,22.4528075546459,9.86671449268897,4.09365799253363,24.7715038561156,1.48418066444991,11.5657270351992,8.70052454034323,1.31403449622095,17.1353961630595,10.6913548183163,0,5.01266175758212,0.552485933615378,0.68888668898764,1.27463817604702,1.18011973463482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.54941678891006,0.165018999841176,0,4.55042172225565,1.6068392984416,1.64340221096607,0.924291702687866,0.460511024178389,1.10269257987624,1.28904293841928,1.16013355131383,0.681813019328807,2.49289699810865,1.15699440752685,0.768760269460425,0.127612712494584,0.6069466851333,2.32422774648643,14.1665556073788,0.6970372701606,2.15623506123262,0,2.60979897622522,0.55597265731176,0.715624433709956,0.372158369359667,0.316379424718726,4.76575484809562,1.02359116524534,0.42793898803392,0.636406495851874,0,1.07923474549989,6.03981465419321,2.82749765629647,0.404364963146632,0,0.842516912477962,0,16.8162307845586,7.39551027297288,0.409499734223957,1.27264888758341,4.52032466480971,2.75682671773062,7.29782872765342,4.38450885253763,1.15755106853338,0,0.202910376962704,2.478587984798,3.09865162785466,0.860468113224309,1.27723753317057,0,0,2.53329162357197,23.379937400153,0,0.699869440489966,0.0962221127255121,1.34060455107157,0,0.188287601553558,1.29151611801369,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,4.2620422020962,0,0,0,0,0.422008249231538,0,0,0,7.96991953004279,0.276283915531148,0,0,0,4.3545542272653,0,0,0,1.1837208676432,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0,0.295547618953547,0,0,0,0.230850775511391,1.59518878185802,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.808813595768125,0,0.702793337176017,0,0,0,0,2.41981432097328,0.30607276163049,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.193978032976839,0,1.35588444468319,0.137041924646751,0,0.126621591911757,0,0,0.85381197895741,0,0,0,0,0,0,0,0.67952103036807,0.627617077873999,0,0.288950589901519,0,0,0,0.859530882839914,0,1.95497680890578,0.458320848023367,2.15361907373044,0.199679000498991,0.858452096273142,0.223171457441873,0.53746777989381,7.20599767084807,0,0,0,0,0,0,0,0.681017030557878,0.160753148465019,0.13753943659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| |||
|short_description=p@chr6:169632100..169632154,- | |||
}} |
Revision as of 15:15, 22 January 2014
Short description: | p@chr6:169632100..169632154, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:169632100..169632154, - |
Coexpression cluster: | C1974_Olfactory_Preadipocyte_Fibroblast_Synoviocyte_Smooth_Adipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.89e-22 | 76 |
somatic stem cell | 3.90e-15 | 433 |
preadipocyte | 2.69e-14 | 12 |
multi fate stem cell | 3.31e-14 | 427 |
stem cell | 3.37e-14 | 441 |
muscle cell | 1.27e-10 | 55 |
muscle precursor cell | 1.26e-09 | 58 |
myoblast | 1.26e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.26e-09 | 58 |
smooth muscle cell | 7.35e-09 | 43 |
smooth muscle myoblast | 7.35e-09 | 43 |
electrically responsive cell | 9.68e-09 | 61 |
electrically active cell | 9.68e-09 | 61 |
fat cell | 5.72e-08 | 15 |
vascular associated smooth muscle cell | 9.35e-08 | 32 |
connective tissue cell | 9.94e-08 | 361 |
mesenchymal cell | 1.17e-07 | 354 |
smooth muscle cell of the subclavian artery | 6.82e-07 | 5 |
cardiocyte | 8.62e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.93e-13 | 14 |