FFCP PHASE1:Hg19::chr7:155302608..155302618,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr7:155302608..155302618,- | |||
|id=chr7:155302608..155302618,- | |||
|ontology_enrichment_celltype=CL:0000128!8.71e-28!7;CL:0000126!8.71e-28!7;CL:0000127!8.71e-28!7;CL:0002453!8.71e-28!7;CL:0002603!2.44e-24!3;CL:0000095!3.03e-19!17;CL:0000123!3.03e-19!17;CL:0000242!2.77e-16!2;CL:0002319!2.56e-13!25;CL:0000243!2.27e-11!15;CL:0000125!2.27e-11!15;CL:0000030!2.27e-11!15;CL:0000339!2.27e-11!15;CL:0000333!4.58e-08!41;CL:0000312!4.85e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002603;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,2.31e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.72e-99;3 | |||
|ontology_enrichment_disease=DOID:3347!2.60e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:1115;1.42e-07;20 | |||
|ontology_enrichment_disease_v019_2=DOID:1115,1.52e-07,20 | |||
|ontology_enrichment_uberon=UBERON:0002680!1.62e-54!9;UBERON:0001895!1.62e-54!9;UBERON:0010092!1.62e-54!9;UBERON:0004733!4.54e-51!12;UBERON:0002028!4.54e-51!12;UBERON:0007277!4.54e-51!12;UBERON:0002037!1.92e-47!6;UBERON:0006215!1.92e-47!6;UBERON:0004732!4.76e-47!13;UBERON:0003076!1.30e-40!15;UBERON:0003057!1.30e-40!15;UBERON:0001049!8.98e-12!57;UBERON:0005068!8.98e-12!57;UBERON:0006241!8.98e-12!57;UBERON:0007135!8.98e-12!57;UBERON:0000955!2.40e-11!69;UBERON:0006238!2.40e-11!69;UBERON:0002616!2.51e-11!59;UBERON:0000988!7.74e-11!3;UBERON:0001017!2.66e-09!82;UBERON:0000473!5.73e-09!8;UBERON:0002298!6.58e-09!8;UBERON:0005743!8.54e-09!86;UBERON:0000073!8.31e-08!94;UBERON:0001016!8.31e-08!94;UBERON:0003075!2.60e-07!86;UBERON:0007284!2.60e-07!86;UBERON:0002346!6.40e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.09e-87;6!UBERON:0002680;8.65e-59;9!UBERON:0001895;8.65e-59;9!UBERON:0004733;2.54e-44;12!UBERON:0002028;2.54e-44;12!UBERON:0004732;5.57e-41;13!UBERON:0000073;2.13e-07;53!UBERON:0002616;2.13e-07;53!UBERON:0001016;4.49e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,7.00e-88,6;UBERON:0006215,7.00e-88,6;UBERON:0002680,6.42e-59,9;UBERON:0001895,6.42e-59,9;UBERON:0010092,6.42e-59,9;UBERON:0004733,2.03e-44,12;UBERON:0002028,2.03e-44,12;UBERON:0007277,2.03e-44,12;UBERON:0004732,4.54e-41,13;UBERON:0003076,1.04e-35,15;UBERON:0003057,1.04e-35,15;UBERON:0000073,2.12e-10,53;UBERON:0002616,2.12e-10,53;UBERON:0001049,7.01e-10,56;UBERON:0005068,7.01e-10,56;UBERON:0006241,7.01e-10,56;UBERON:0007135,7.01e-10,56;UBERON:0000955,3.85e-08,68;UBERON:0006238,3.85e-08,68;UBERON:0001017,6.13e-07,81;UBERON:0003075,6.13e-07,82;UBERON:0007284,6.13e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72369481307503,0.408001382488506,0.626909442956176,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0,0.173624994933292,0,0,1.52581736317083,5.75012151642368,4.72876190325676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0.572682980829578,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,1.04314963381548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:155302608..155302618,- | |||
}} |
Revision as of 20:18, 22 January 2014
Short description: | p@chr7:155302608..155302618, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:155302608..155302618, - |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 2.31e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 7.00e-88 | 6 |
rhombic lip | 7.00e-88 | 6 |
regional part of metencephalon | 6.42e-59 | 9 |
metencephalon | 6.42e-59 | 9 |
future metencephalon | 6.42e-59 | 9 |
segmental subdivision of hindbrain | 2.03e-44 | 12 |
hindbrain | 2.03e-44 | 12 |
presumptive hindbrain | 2.03e-44 | 12 |
segmental subdivision of nervous system | 4.54e-41 | 13 |
posterior neural tube | 1.04e-35 | 15 |
chordal neural plate | 1.04e-35 | 15 |
regional part of nervous system | 2.12e-10 | 53 |
regional part of brain | 2.12e-10 | 53 |
neural tube | 7.01e-10 | 56 |
neural rod | 7.01e-10 | 56 |
future spinal cord | 7.01e-10 | 56 |
neural keel | 7.01e-10 | 56 |
brain | 3.85e-08 | 68 |
future brain | 3.85e-08 | 68 |
central nervous system | 6.13e-07 | 81 |
neural plate | 6.13e-07 | 82 |
presumptive neural plate | 6.13e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
sarcoma | 1.52e-07 | 20 |