FFCP PHASE1:Mm9::chr2:131735667..131735684,+: Difference between revisions
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{{FFCP|EntrezGene=19122|HGNC=|MCL_coexpression_id=2824|UniProt=|association_with_transcript=0bp_to_ENSMUST00000142070_5end|description=CAGE_peak_1_at_Prnp_5end|id=chr2:131735667..131735684,+|ontology_enrichment_celltype=CL:0000055!1.89e-12!50;CL:0000221!4.09e-11!44;CL:0000133!4.09e-11!44;CL:0002319!8.44e-11!43;CL:0000393!1.91e-08!39;CL:0000211!1.91e-08!39|ontology_enrichment_celltype_v019_2=CL:0000221,4.07e-11,44;CL:0000133,4.07e-11,44;CL:0002319,8.40e-11,43;CL:0000393,1.90e-08,39;CL:0000211,1.90e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!6.53e-25!102;UBERON:0000924!6.53e-25!102;UBERON:0006601!6.53e-25!102;UBERON:0000073!5.14e-24!75;UBERON:0001016!5.14e-24!75;UBERON:0001017!2.32e-23!73;UBERON:0005743!2.32e-23!73;UBERON:0000955!1.55e-17!50;UBERON:0006238!1.55e-17!50;UBERON:0002616!6.31e-17!49;UBERON:0001049!3.50e-16!52;UBERON:0005068!3.50e-16!52;UBERON:0006241!3.50e-16!52;UBERON:0007135!3.50e-16!52;UBERON:0000033!7.77e-16!63;UBERON:0002346!9.55e-16!71;UBERON:0003075!9.55e-16!71;UBERON:0007284!9.55e-16!71;UBERON:0003080!4.42e-12!40;UBERON:0004111!1.20e-11!122;UBERON:0002780!1.70e-11!39;UBERON:0001890!1.70e-11!39;UBERON:0006240!1.70e-11!39;UBERON:0003056!4.22e-11!49;UBERON:0002020!5.85e-11!34;UBERON:0000025!5.97e-11!114;UBERON:0002791!1.03e-10!29;UBERON:0003528!1.03e-10!29;UBERON:0001893!1.03e-10!29;UBERON:0000956!1.87e-07!21;UBERON:0001869!1.87e-07!21;UBERON:0000203!1.87e-07!21;UBERON:0002619!5.24e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.13e-24,95;UBERON:0000924,1.13e-24,95;UBERON:0006601,1.13e-24,95;UBERON:0001016,5.09e-24,75;UBERON:0001017,2.30e-23,73;UBERON:0010314,4.47e-20,92;UBERON:0010371,2.16e-17,73;UBERON:0000073,2.68e-17,54;UBERON:0001049,3.48e-16,52;UBERON:0005068,3.48e-16,52;UBERON:0006241,3.48e-16,52;UBERON:0007135,3.48e-16,52;UBERON:0000955,8.24e-16,47;UBERON:0006238,8.24e-16,47;UBERON:0002346,1.05e-15,64;UBERON:0003075,1.05e-15,64;UBERON:0007284,1.05e-15,64;UBERON:0002616,3.25e-15,46;UBERON:0003080,4.40e-12,40;UBERON:0004111,1.19e-11,122;UBERON:0002780,1.69e-11,39;UBERON:0001890,1.69e-11,39;UBERON:0006240,1.69e-11,39;UBERON:0003056,4.20e-11,49;UBERON:0002020,5.82e-11,34;UBERON:0000025,5.94e-11,114;UBERON:0003528,1.03e-10,29;UBERON:0002791,1.03e-10,29;UBERON:0001893,1.03e-10,29;UBERON:0000956,1.87e-07,21;UBERON:0001869,1.87e-07,21;UBERON:0000203,1.87e-07,21;UBERON:0002619,5.22e-07,17|phase1_expression=12.0111635328595,8.02643437570531,16.3799726180233,0,0.500895729946347,11.0800319461847,10.0453435456076,2.06597317506522,7.88416844049334,8.42632294759177,0.171217968225505,1.19658238493005,0.171200729931206,0.262261207256992,1.66554880907831,3.44207954562704,7.69518065940961,0.630924330716475,0.411343300817216,0,24.0672511127527,4.46809280403984,6.26879493933445,15.1992801653736,21.564472420314,10.3361753540704,11.630573896295,16.1603424514417,0.190023419456374,0.504060259519861,10.6430645114546,0,1.23012957516914,0,0.577703239502549,0,0.204169356262369,10.0447591376858,7.813353445238,2.09409497589519,2.94115744015507,1.36609096991689,2.42755176515577,27.9490935905782,23.8235788365859,19.4559557291382,16.4302182313088,92.4426663053093,106.767484808953,98.770388729736,57.3944328663986,74.7513334697852,0.838913030288682,0.725362142011344,0,24.6969058594509,36.6762803121609,45.3791441204149,11.7343547298567,23.8045940672415,13.3104594736298,35.2398313351897,20.4537803105562,10.7987966073768,11.8663963508037,15.6305625288142,84.4872311661901,118.72345634436,12.4427534770173,15.1206650931494,11.7781978356774,15.996455126613,23.6329338818226,7.83941114975706,9.96792898589658,9.19218786610021,45.1475112097494,61.6729842951457,61.2890067692411,14.5074916503213,23.3293491186145,18.7528813400434,66.72473676133,72.033614084055,70.7455887206631,11.490514833473,13.2405663143166,12.6751623161204,15.5238696333027,25.5431873160935,3.47837386442013,4.30211938490693,12.9194553404473,5.39703191637817,3.24888208723835,2.24013443548668,14.4657752735704,49.7656541927929,61.5692830908799,54.4142944745924,21.4081998060554,39.7812079984385,17.8363667794652,0,6.92771331235885,8.10751569520315,8.59391556525132,9.93399753555822,7.50919862576798,16.3286352971307,8.32729568477452,9.43842982767638,11.761390360059,13.4143150091834,13.1699351991989,17.9703225601436,20.517182321953,11.423349196673,8.84610551949874,12.7795811458453,11.0420759230197,13.091631834651,7.45567044872489,58.5561594023094,48.801082687535,2.55457055208591,1.7972268675888,0.599902730993408,1.01656181658452,74.1463665053872,50.7825669128675,30.2826988592003,84.1309709730618,89.2446946082854,90.5955874279682,79.1737363770657,20.9789089531652,14.9288364732112,21.2287117084287,16.8353484709179,5.20481771850815,7.58676944630461,8.64298223065676,10.3986324306643,13.8794458268709,11.5302348256365,12.5560310910037,23.8007101079894,3.66465587985832,3.78212160335639,4.92663147659057,7.01426343768239,7.22922847986555,8.00979983000983,18.7261744131229,9.55364480728767,0,0.51469581422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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19122 | |||
|HGNC= | |||
|MCL_coexpression_id=2824 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000142070_5end | |||
|cluster_id=chr2:131735667..131735684,+ | |||
|description=CAGE_peak_1_at_Prnp_5end | |||
|id=chr2:131735667..131735684,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.89e-12!50;CL:0000221!4.09e-11!44;CL:0000133!4.09e-11!44;CL:0002319!8.44e-11!43;CL:0000393!1.91e-08!39;CL:0000211!1.91e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.07e-11,44;CL:0000133,4.07e-11,44;CL:0002319,8.40e-11,43;CL:0000393,1.90e-08,39;CL:0000211,1.90e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!6.53e-25!102;UBERON:0000924!6.53e-25!102;UBERON:0006601!6.53e-25!102;UBERON:0000073!5.14e-24!75;UBERON:0001016!5.14e-24!75;UBERON:0001017!2.32e-23!73;UBERON:0005743!2.32e-23!73;UBERON:0000955!1.55e-17!50;UBERON:0006238!1.55e-17!50;UBERON:0002616!6.31e-17!49;UBERON:0001049!3.50e-16!52;UBERON:0005068!3.50e-16!52;UBERON:0006241!3.50e-16!52;UBERON:0007135!3.50e-16!52;UBERON:0000033!7.77e-16!63;UBERON:0002346!9.55e-16!71;UBERON:0003075!9.55e-16!71;UBERON:0007284!9.55e-16!71;UBERON:0003080!4.42e-12!40;UBERON:0004111!1.20e-11!122;UBERON:0002780!1.70e-11!39;UBERON:0001890!1.70e-11!39;UBERON:0006240!1.70e-11!39;UBERON:0003056!4.22e-11!49;UBERON:0002020!5.85e-11!34;UBERON:0000025!5.97e-11!114;UBERON:0002791!1.03e-10!29;UBERON:0003528!1.03e-10!29;UBERON:0001893!1.03e-10!29;UBERON:0000956!1.87e-07!21;UBERON:0001869!1.87e-07!21;UBERON:0000203!1.87e-07!21;UBERON:0002619!5.24e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.13e-24,95;UBERON:0000924,1.13e-24,95;UBERON:0006601,1.13e-24,95;UBERON:0001016,5.09e-24,75;UBERON:0001017,2.30e-23,73;UBERON:0010314,4.47e-20,92;UBERON:0010371,2.16e-17,73;UBERON:0000073,2.68e-17,54;UBERON:0001049,3.48e-16,52;UBERON:0005068,3.48e-16,52;UBERON:0006241,3.48e-16,52;UBERON:0007135,3.48e-16,52;UBERON:0000955,8.24e-16,47;UBERON:0006238,8.24e-16,47;UBERON:0002346,1.05e-15,64;UBERON:0003075,1.05e-15,64;UBERON:0007284,1.05e-15,64;UBERON:0002616,3.25e-15,46;UBERON:0003080,4.40e-12,40;UBERON:0004111,1.19e-11,122;UBERON:0002780,1.69e-11,39;UBERON:0001890,1.69e-11,39;UBERON:0006240,1.69e-11,39;UBERON:0003056,4.20e-11,49;UBERON:0002020,5.82e-11,34;UBERON:0000025,5.94e-11,114;UBERON:0003528,1.03e-10,29;UBERON:0002791,1.03e-10,29;UBERON:0001893,1.03e-10,29;UBERON:0000956,1.87e-07,21;UBERON:0001869,1.87e-07,21;UBERON:0000203,1.87e-07,21;UBERON:0002619,5.22e-07,17 | |||
|phase1_expression=12.0111635328595,8.02643437570531,16.3799726180233,0,0.500895729946347,11.0800319461847,10.0453435456076,2.06597317506522,7.88416844049334,8.42632294759177,0.171217968225505,1.19658238493005,0.171200729931206,0.262261207256992,1.66554880907831,3.44207954562704,7.69518065940961,0.630924330716475,0.411343300817216,0,24.0672511127527,4.46809280403984,6.26879493933445,15.1992801653736,21.564472420314,10.3361753540704,11.630573896295,16.1603424514417,0.190023419456374,0.504060259519861,10.6430645114546,0,1.23012957516914,0,0.577703239502549,0,0.204169356262369,10.0447591376858,7.813353445238,2.09409497589519,2.94115744015507,1.36609096991689,2.42755176515577,27.9490935905782,23.8235788365859,19.4559557291382,16.4302182313088,92.4426663053093,106.767484808953,98.770388729736,57.3944328663986,74.7513334697852,0.838913030288682,0.725362142011344,0,24.6969058594509,36.6762803121609,45.3791441204149,11.7343547298567,23.8045940672415,13.3104594736298,35.2398313351897,20.4537803105562,10.7987966073768,11.8663963508037,15.6305625288142,84.4872311661901,118.72345634436,12.4427534770173,15.1206650931494,11.7781978356774,15.996455126613,23.6329338818226,7.83941114975706,9.96792898589658,9.19218786610021,45.1475112097494,61.6729842951457,61.2890067692411,14.5074916503213,23.3293491186145,18.7528813400434,66.72473676133,72.033614084055,70.7455887206631,11.490514833473,13.2405663143166,12.6751623161204,15.5238696333027,25.5431873160935,3.47837386442013,4.30211938490693,12.9194553404473,5.39703191637817,3.24888208723835,2.24013443548668,14.4657752735704,49.7656541927929,61.5692830908799,54.4142944745924,21.4081998060554,39.7812079984385,17.8363667794652,0,6.92771331235885,8.10751569520315,8.59391556525132,9.93399753555822,7.50919862576798,16.3286352971307,8.32729568477452,9.43842982767638,11.761390360059,13.4143150091834,13.1699351991989,17.9703225601436,20.517182321953,11.423349196673,8.84610551949874,12.7795811458453,11.0420759230197,13.091631834651,7.45567044872489,58.5561594023094,48.801082687535,2.55457055208591,1.7972268675888,0.599902730993408,1.01656181658452,74.1463665053872,50.7825669128675,30.2826988592003,84.1309709730618,89.2446946082854,90.5955874279682,79.1737363770657,20.9789089531652,14.9288364732112,21.2287117084287,16.8353484709179,5.20481771850815,7.58676944630461,8.64298223065676,10.3986324306643,13.8794458268709,11.5302348256365,12.5560310910037,23.8007101079894,3.66465587985832,3.78212160335639,4.92663147659057,7.01426343768239,7.22922847986555,8.00979983000983,18.7261744131229,9.55364480728767,0,0.51469581422943,0.284163499395593,9.32065976409758,11.7263029990548,15.4853372856473,9.94327889457883,12.7896750635812,18.5120535464854,20.4629871380359,12.6088498657821,20.667465598989,14.9749463421267,16.2525789438304,16.862312385538,16.2281986042119,21.9550115291051,22.009852676701,94.209896956729,52.5842569258143,0.660837565967596,1.58670339998127,9.59797127408553,7.43157349953403,4.38149368495117,5.44545516483025,4.66993892074228,5.32631753115166,4.74529061544512,8.72904460037258,6.78605063760728,9.35095418593409,7.79856348476481,2.69645822596266,13.1844210423563,8.36393347668342,3.79335801906163,4.22719496655997,4.50830942692322,4.68398054044223,5.81857461502877,6.10181633045771,7.3986748435381,9.29943932271494,7.53593893638599,8.02081565491703,5.63259991465583,4.33797274861845,4.71741588271687,3.82265591054251,5.07150303471257,5.54707467430559,2.5462585178142,5.4662266115654,3.89124544260085,7.4131581560782,1.43768206527355,5.95425516269605,7.17686648163489,6.31447194867779,6.45830688678884,5.78932225636041,14.7802552133284,3.41084541186873,7.33342393989116,7.29903868833309,8.91822943496308,9.38035041674168,13.8065311713888,18.9279638422065,17.6551361398934,20.8176808269848,22.9614866866781,11.6342953448174,13.4694285855399,14.6095549167327,13.5712155545345,3.80733978673097,8.35999264132362,7.72622889653251,72.7294172644698,83.2202974804643,44.2624352517024,26.2569764292548,16.7219356290616,12.1036010731958,21.9731865687455,16.9667846546312,19.8290819933331,13.0215204162863,14.5731852602962,18.4121190484126,20.9502522311657,64.5855846007832,9.08416545332919,14.6013795007149,17.5917916101862,14.0224604526655,3.98235415019888,9.46844481004428,6.04647113929502,6.97838795096823,7.67784921490009,8.9156192903739,9.56184684722418,5.08947221268508,6.06045543254026,7.58488219045958,6.32511651449993,6.18813259489121,47.6615448055303,5.221771726908,7.76152102696527,9.43082954139006,10.6404140185364,17.1234064897988,19.4167844310503,21.0080814889074,47.8730284449969,32.8339709838921,9.92377791247329,24.0733929294561,22.1206264573391,23.6426665718371,27.5750114647245,27.2473893576802,7.57850175237612,66.567683421773,5.12612642393558,13.4151464176095,7.77817014952789,10.7370020492674,9.02181902958766,13.7266903923914,6.62915876976036,4.05859211738608,4.00779924032829,17.184071124272,12.3371037496643,9.55601495496189,8.5324219249223,11.4998562807958,12.4466661335321,17.8020937227963,16.9439584236939,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| |||
|short_description=p1@Prnp | |||
}} |
Revision as of 02:18, 4 August 2015
Short description: | p1@Prnp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Prnp_5end |
Coexpression cluster: | MCL_coexpression_mm9:2824 |
Association with transcript: | 0bp_to_ENSMUST00000142070_5end |
EntrezGene: | 19122 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.07e-11 | 44 |
neurectodermal cell | 4.07e-11 | 44 |
neural cell | 8.40e-11 | 43 |
electrically responsive cell | 1.90e-08 | 39 |
electrically active cell | 1.90e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.13e-24 | 95 |
ectoderm | 1.13e-24 | 95 |
presumptive ectoderm | 1.13e-24 | 95 |
nervous system | 5.09e-24 | 75 |
central nervous system | 2.30e-23 | 73 |
structure with developmental contribution from neural crest | 4.47e-20 | 92 |
ecto-epithelium | 2.16e-17 | 73 |
regional part of nervous system | 2.68e-17 | 54 |
neural tube | 3.48e-16 | 52 |
neural rod | 3.48e-16 | 52 |
future spinal cord | 3.48e-16 | 52 |
neural keel | 3.48e-16 | 52 |
brain | 8.24e-16 | 47 |
future brain | 8.24e-16 | 47 |
neurectoderm | 1.05e-15 | 64 |
neural plate | 1.05e-15 | 64 |
presumptive neural plate | 1.05e-15 | 64 |
regional part of brain | 3.25e-15 | 46 |
anterior neural tube | 4.40e-12 | 40 |
anatomical conduit | 1.19e-11 | 122 |
regional part of forebrain | 1.69e-11 | 39 |
forebrain | 1.69e-11 | 39 |
future forebrain | 1.69e-11 | 39 |
pre-chordal neural plate | 4.20e-11 | 49 |
gray matter | 5.82e-11 | 34 |
tube | 5.94e-11 | 114 |
brain grey matter | 1.03e-10 | 29 |
regional part of telencephalon | 1.03e-10 | 29 |
telencephalon | 1.03e-10 | 29 |
cerebral cortex | 1.87e-07 | 21 |
cerebral hemisphere | 1.87e-07 | 21 |
pallium | 1.87e-07 | 21 |
regional part of cerebral cortex | 5.22e-07 | 17 |