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FFCP PHASE1:Mm9::chr2:144425682..144425775,+: Difference between revisions

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{{FFCP|EntrezGene=66044|HGNC=|MCL_coexpression_id=1|UniProt=Q9DD18|association_with_transcript=0bp_to_NM_025314,uc008mro.2_5end|description=CAGE_peak_1_at_Dtd1_5end|id=chr2:144425682..144425775,+|ontology_enrichment_celltype=CL:0000117!8.75e-08!23;CL:0000337!8.75e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,8.75e-08,23;CL:0000337,8.75e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.11e-14!52;UBERON:0005068!6.11e-14!52;UBERON:0006241!6.11e-14!52;UBERON:0007135!6.11e-14!52;UBERON:0000033!2.14e-13!63;UBERON:0000955!8.20e-13!50;UBERON:0006238!8.20e-13!50;UBERON:0002616!2.52e-12!49;UBERON:0002020!2.42e-11!34;UBERON:0003056!1.45e-10!49;UBERON:0001017!3.41e-10!73;UBERON:0005743!3.41e-10!73;UBERON:0002346!8.13e-10!71;UBERON:0003075!8.13e-10!71;UBERON:0007284!8.13e-10!71;UBERON:0003080!9.16e-10!40;UBERON:0002780!3.52e-09!39;UBERON:0001890!3.52e-09!39;UBERON:0006240!3.52e-09!39;UBERON:0000073!5.76e-09!75;UBERON:0001016!5.76e-09!75;UBERON:0002791!1.15e-08!29;UBERON:0003528!1.15e-08!29;UBERON:0001893!1.15e-08!29;UBERON:0007811!1.30e-08!86;UBERON:0000153!2.30e-08!94;UBERON:0002021!1.96e-07!10;UBERON:0000411!1.96e-07!10;UBERON:0001950!1.96e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.50e-15,54;UBERON:0001049,6.11e-14,52;UBERON:0005068,6.11e-14,52;UBERON:0006241,6.11e-14,52;UBERON:0007135,6.11e-14,52;UBERON:0002346,1.59e-12,64;UBERON:0003075,1.59e-12,64;UBERON:0007284,1.59e-12,64;UBERON:0002020,2.42e-11,34;UBERON:0000955,3.55e-11,47;UBERON:0006238,3.55e-11,47;UBERON:0002616,1.04e-10,46;UBERON:0003056,1.45e-10,49;UBERON:0001017,3.41e-10,73;UBERON:0003080,9.16e-10,40;UBERON:0010371,1.12e-09,73;UBERON:0002780,3.52e-09,39;UBERON:0001890,3.52e-09,39;UBERON:0006240,3.52e-09,39;UBERON:0001016,5.76e-09,75;UBERON:0003528,1.15e-08,29;UBERON:0002791,1.15e-08,29;UBERON:0001893,1.15e-08,29;UBERON:0002021,1.96e-07,10;UBERON:0000411,1.96e-07,10;UBERON:0001950,1.96e-07,10;UBERON:0004121,8.22e-07,95;UBERON:0000924,8.22e-07,95;UBERON:0006601,8.22e-07,95|phase1_expression=24.6629224541383,3.14077866875425,2.72999543633722,2.41971369045464,2.00358291978539,9.73699777088961,8.87728034262997,23.75869151325,7.88416844049334,7.72412936862578,24.6553874244727,23.1339261086476,26.0225109495433,24.0406106652243,23.6507930889121,21.0574278085419,23.0855419782288,27.1297462208084,24.13214031461,18.2487550273153,26.788636397587,14.5957698265301,16.7167865048919,8.47959840805055,11.0116454912242,5.7423196411502,6.8921919385452,7.97243560937789,5.89072600314759,7.56090389279792,10.199603490144,38.1018404075779,30.1381745916439,15.8481681015439,22.8192779603507,24.6027275130569,21.2336130512864,2.51118978442145,5.4693474116666,4.71171369576418,1.76469446409304,0.683045484958446,1.94204141212461,25.305260413091,21.086401693659,12.2976323948327,7.04152209913235,14.6076854774899,9.22681967484782,13.8045228342741,13.0187372111587,25.8754615856949,23.4895648480831,28.2891235384424,32.2650047176765,10.2903774414379,12.6074713573053,10.3134418455488,41.0702415544984,53.9570798857474,36.1283899998522,7.45457970552091,2.66788438833342,3.5995988691256,2.96659908770092,4.2628806896766,8.38880309451533,16.5213871288268,12.6501327016343,14.850653216486,10.3059231062177,56.8445458963569,53.6710554512421,16.2912762955889,17.443875725319,16.5459381589804,62.7660521696516,65.6312917757865,50.5365494413041,36.0049565503429,53.6117591510121,44.2776364973246,68.9582007533411,63.5921749335798,49.6594305274633,55.3901740690495,58.6571324892304,59.0886243266203,4.61929779332423,4.91215140694106,24.9283460283443,17.2084775396277,6.79971333707751,17.2705021324101,24.0417274455638,21.9533174677694,20.926218599631,11.4188316127299,13.768658243952,10.2468476607999,26.3377194982393,21.815501160434,2.54805239706646,14.2213340630666,9.95858788651585,10.387754484479,9.0994400102661,13.4736978068491,33.144049106838,19.1490359393624,11.6235168933311,10.9607572192371,11.992005857315,11.6056433225519,12.2292255421133,11.6869929936598,5.6854842578906,16.33972733195,9.73071607144862,13.426648545635,12.367125033782,11.1521308221101,18.6391761218122,48.6016123039168,40.4232144149968,8.17462576667492,29.5943357529623,37.7938720525847,31.386346087047,73.6969945871728,59.0175777636028,36.6910708169564,58.7526202249894,52.9330996673784,75.8426362642394,65.0587464901708,21.9973025916683,13.5603597965001,20.7232661915613,21.6755111563068,20.6891504310699,20.921091503446,16.7457780718975,15.8240058727501,16.1246502988647,19.7295129238669,17.0537138698706,27.9399640398137,16.1675994699632,14.5611681729221,16.3634545472472,15.3437012699302,14.4584569597311,16.3678518265418,15.0220959577799,12.9372273432021,40.0261516768544,30.6244009466511,30.9738214341196,12.8417978972011,13.1334593589414,13.5046546095761,13.2577051927718,17.1184881620241,14.9639099500757,15.3472403535269,12.0723030629829,15.2962598500992,13.8230273927324,12.6408947340903,11.9171150032408,17.2515985161892,14.0512073786272,16.1047702512446,55.9371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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:66044
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:Q9DD18
|association_with_transcript=0bp_to_NM_025314,uc008mro.2_5end
|cluster_id=chr2:144425682..144425775,+
|description=CAGE_peak_1_at_Dtd1_5end
|id=chr2:144425682..144425775,+
|ontology_enrichment_celltype=CL:0000117!8.75e-08!23;CL:0000337!8.75e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,8.75e-08,23;CL:0000337,8.75e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.11e-14!52;UBERON:0005068!6.11e-14!52;UBERON:0006241!6.11e-14!52;UBERON:0007135!6.11e-14!52;UBERON:0000033!2.14e-13!63;UBERON:0000955!8.20e-13!50;UBERON:0006238!8.20e-13!50;UBERON:0002616!2.52e-12!49;UBERON:0002020!2.42e-11!34;UBERON:0003056!1.45e-10!49;UBERON:0001017!3.41e-10!73;UBERON:0005743!3.41e-10!73;UBERON:0002346!8.13e-10!71;UBERON:0003075!8.13e-10!71;UBERON:0007284!8.13e-10!71;UBERON:0003080!9.16e-10!40;UBERON:0002780!3.52e-09!39;UBERON:0001890!3.52e-09!39;UBERON:0006240!3.52e-09!39;UBERON:0000073!5.76e-09!75;UBERON:0001016!5.76e-09!75;UBERON:0002791!1.15e-08!29;UBERON:0003528!1.15e-08!29;UBERON:0001893!1.15e-08!29;UBERON:0007811!1.30e-08!86;UBERON:0000153!2.30e-08!94;UBERON:0002021!1.96e-07!10;UBERON:0000411!1.96e-07!10;UBERON:0001950!1.96e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.50e-15,54;UBERON:0001049,6.11e-14,52;UBERON:0005068,6.11e-14,52;UBERON:0006241,6.11e-14,52;UBERON:0007135,6.11e-14,52;UBERON:0002346,1.59e-12,64;UBERON:0003075,1.59e-12,64;UBERON:0007284,1.59e-12,64;UBERON:0002020,2.42e-11,34;UBERON:0000955,3.55e-11,47;UBERON:0006238,3.55e-11,47;UBERON:0002616,1.04e-10,46;UBERON:0003056,1.45e-10,49;UBERON:0001017,3.41e-10,73;UBERON:0003080,9.16e-10,40;UBERON:0010371,1.12e-09,73;UBERON:0002780,3.52e-09,39;UBERON:0001890,3.52e-09,39;UBERON:0006240,3.52e-09,39;UBERON:0001016,5.76e-09,75;UBERON:0003528,1.15e-08,29;UBERON:0002791,1.15e-08,29;UBERON:0001893,1.15e-08,29;UBERON:0002021,1.96e-07,10;UBERON:0000411,1.96e-07,10;UBERON:0001950,1.96e-07,10;UBERON:0004121,8.22e-07,95;UBERON:0000924,8.22e-07,95;UBERON:0006601,8.22e-07,95
|phase1_expression=24.6629224541383,3.14077866875425,2.72999543633722,2.41971369045464,2.00358291978539,9.73699777088961,8.87728034262997,23.75869151325,7.88416844049334,7.72412936862578,24.6553874244727,23.1339261086476,26.0225109495433,24.0406106652243,23.6507930889121,21.0574278085419,23.0855419782288,27.1297462208084,24.13214031461,18.2487550273153,26.788636397587,14.5957698265301,16.7167865048919,8.47959840805055,11.0116454912242,5.7423196411502,6.8921919385452,7.97243560937789,5.89072600314759,7.56090389279792,10.199603490144,38.1018404075779,30.1381745916439,15.8481681015439,22.8192779603507,24.6027275130569,21.2336130512864,2.51118978442145,5.4693474116666,4.71171369576418,1.76469446409304,0.683045484958446,1.94204141212461,25.305260413091,21.086401693659,12.2976323948327,7.04152209913235,14.6076854774899,9.22681967484782,13.8045228342741,13.0187372111587,25.8754615856949,23.4895648480831,28.2891235384424,32.2650047176765,10.2903774414379,12.6074713573053,10.3134418455488,41.0702415544984,53.9570798857474,36.1283899998522,7.45457970552091,2.66788438833342,3.5995988691256,2.96659908770092,4.2628806896766,8.38880309451533,16.5213871288268,12.6501327016343,14.850653216486,10.3059231062177,56.8445458963569,53.6710554512421,16.2912762955889,17.443875725319,16.5459381589804,62.7660521696516,65.6312917757865,50.5365494413041,36.0049565503429,53.6117591510121,44.2776364973246,68.9582007533411,63.5921749335798,49.6594305274633,55.3901740690495,58.6571324892304,59.0886243266203,4.61929779332423,4.91215140694106,24.9283460283443,17.2084775396277,6.79971333707751,17.2705021324101,24.0417274455638,21.9533174677694,20.926218599631,11.4188316127299,13.768658243952,10.2468476607999,26.3377194982393,21.815501160434,2.54805239706646,14.2213340630666,9.95858788651585,10.387754484479,9.0994400102661,13.4736978068491,33.144049106838,19.1490359393624,11.6235168933311,10.9607572192371,11.992005857315,11.6056433225519,12.2292255421133,11.6869929936598,5.6854842578906,16.33972733195,9.73071607144862,13.426648545635,12.367125033782,11.1521308221101,18.6391761218122,48.6016123039168,40.4232144149968,8.17462576667492,29.5943357529623,37.7938720525847,31.386346087047,73.6969945871728,59.0175777636028,36.6910708169564,58.7526202249894,52.9330996673784,75.8426362642394,65.0587464901708,21.9973025916683,13.5603597965001,20.7232661915613,21.6755111563068,20.6891504310699,20.921091503446,16.7457780718975,15.8240058727501,16.1246502988647,19.7295129238669,17.0537138698706,27.9399640398137,16.1675994699632,14.5611681729221,16.3634545472472,15.3437012699302,14.4584569597311,16.3678518265418,15.0220959577799,12.9372273432021,40.0261516768544,30.6244009466511,30.9738214341196,12.8417978972011,13.1334593589414,13.5046546095761,13.2577051927718,17.1184881620241,14.9639099500757,15.3472403535269,12.0723030629829,15.2962598500992,13.8230273927324,12.6408947340903,11.9171150032408,17.2515985161892,14.0512073786272,16.1047702512446,55.9371263180578,27.8871499547861,2.31293148088659,7.1401652999157,15.7833305396073,16.0243303583703,14.4331556680745,12.9077455758939,16.2335972006755,14.6473732106671,10.4396393539793,16.9639923365731,15.5827829456167,16.7123436514567,17.1568396664826,8.08937467788799,10.3746263939853,10.1562049359727,13.6560888686219,16.2232887905815,20.2873924211545,16.4957575554705,12.0250542043928,18.8665355504957,15.7458977439401,24.2080642686548,23.5498091762062,23.1986668172985,19.2694207606647,17.685581205906,19.2627815210939,17.0895205412489,16.8373900752457,9.88826354984909,12.4766667372896,15.5355914223438,15.0785760900783,12.0807021802756,7.18841032636773,11.5363693777236,14.0416952901552,15.4073115547738,16.8633568710597,14.473305640901,17.5515530658274,18.0016841181961,14.6668478797823,15.2770577197669,16.1936271319066,11.8929442783689,11.6641384034147,6.82967767502296,13.5566223931324,13.730810758224,13.2347457985714,16.7140581010053,15.7143333497965,15.1881511510587,3.01582567878545,2.17562273527484,9.83528546038072,14.6246475541508,72.2477654945064,67.2795081039246,15.5738198107842,10.856249869788,8.83423014365519,8.19921363022941,6.67812532971677,5.73525115086125,4.23317480756549,3.39691836946599,5.26253912177363,7.89090816360542,5.92931666919785,47.5555548304274,14.3359486060351,20.8336756290689,22.3155134314399,21.6110861094021,21.2392221343941,23.3069410708782,21.1626489875326,17.7288774970544,17.1275097870848,16.6014979889721,16.7978390559344,17.8131527443978,19.6073558111597,21.8065362975713,12.6502330289999,14.4389760547462,39.1505546616856,20.1668425315067,16.6872702079753,17.1469628025274,11.7044554203901,16.4099312193905,15.9612549984057,15.5277124048446,6.33613611772018,7.83778662196135,12.1290618930229,13.3557864882599,9.20347232166662,8.02161901544473,10.6241386162791,7.55048138827282,8.16146342563582,63.0446026835733,17.0870880797853,13.4151464176095,18.3342582096015,16.5764242164128,18.5904149700594,14.1842467388044,45.5542192383532,36.2474261518274,34.2735935034971,13.3653886522116,10.9135917785492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|short_description=p1@Dtd1
}}

Revision as of 04:49, 4 August 2015

Short description:p1@Dtd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dtd1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_NM_025314, uc008mro.2_5end
EntrezGene:66044
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dtd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.88
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E923.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E624.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F123.13
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E426.02
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E824.04
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A123.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A321.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A523.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A227.13
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.13
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H214.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.72
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.01
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I27.97
Ileum epithelium, pool1.CNhs13199.10252-104B95.89
Ileum epithelium, pool2.CNhs13232.10253-104C17.56
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I338.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G630.14
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F522.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F624.60
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F721.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D825.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D921.09
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.61
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.23
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.80
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C425.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A223.49
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I928.29
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A132.27
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C341.07
Mouse Granule cells, donor2.CNhs12357.11731-123E353.96
Mouse Granule cells, donor3.CNhs12108.11636-122C736.13
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C88.39
Mouse Microglia, donor2.CNhs12634.11736-123E816.52
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.65
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.85
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F156.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D553.67
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D362.77
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F365.63
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D750.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D436.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F453.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D844.28
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E468.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E563.59
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I649.66
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D655.39
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F658.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E159.09
Mouse Schwann, donor1.CNhs12507.11728-123D94.62
Mouse Schwann, donor2.CNhs12573.11746-123F94.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G324.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C817.27
Mouse hepatocyte, donor6.CNhs13090.11822-124F424.04
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.95
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.25
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G626.34
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.39
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.47
accessory axillary lymph node, adult.CNhs10475.1063-29H933.14
adrenal gland, adult.CNhs10508.49-24D719.15
adrenal gland, embryo E14.CNhs11038.406-44C511.62
adrenal gland, embryo E16.CNhs11004.1254-43D610.96
adrenal gland, embryo E17.CNhs11043.1263-45I111.99
adrenal gland, embryo E18.CNhs11026.1262-18F511.61
adrenal gland, neonate N00.CNhs11191.1311-23C112.23
adrenal gland, neonate N25.CNhs11223.1377-27I311.69
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H116.34
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F513.43
bone (os femoris), neonate N16.CNhs11225.1525-43A612.37
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B248.60
cerebellum, neonate N30.CNhs11135.1395-42I240.42
colon, adult.CNhs10468.36-18H78.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C729.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D137.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D431.39
corpora quadrigemina, adult.CNhs10501.16-22A473.70
corpus striatum, adult.CNhs10487.19-21D859.02
corpus striatum, neonate N00.CNhs11226.630-43F136.69
cortex, adult.CNhs10473.12-14D558.75
cortex, neonate N30.CNhs11107.1392-42F252.93
diencephalon, adult.CNhs10482.20-12F275.84
diencephalon, neonate N30.CNhs11201.1388-42B265.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.56
epididymis, adult.CNhs10490.58-23B220.72
eyeball, adult.CNhs10484.31-12G421.68
eyeball, embryo E12.CNhs11016.345-16C620.69
eyeball, embryo E14.CNhs10521.399-16E220.92
eyeball, embryo E15.CNhs10593.426-16C916.75
eyeball, embryo E17.CNhs11023.1261-18D415.82
eyeball, neonate N00.CNhs11207.633-15C616.12
eyeball, neonate N01.CNhs11140.1532-43E719.73
eyeball, neonate N02.CNhs11205.1551-44G817.05
eyeball, neonate N16.CNhs11188.777-19A227.94
forelimb, embryo E11.CNhs10596.335-25E216.17
forelimb, embryo E12.CNhs10600.359-14H214.56
forelimb, embryo E13.CNhs10589.384-1E216.36
forelimb, embryo E14.CNhs10577.413-26A815.34
forelimb, embryo E15.CNhs11007.437-20E714.46
forelimb, embryo E17.CNhs10598.1517-43C416.37
forelimb, embryo E18.CNhs11008.1520-43B515.02
gonad, embryo E13.CNhs11044.1564-45I612.94
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C840.03
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D230.62
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D530.97
heart, embryo E11.CNhs10586.331-24E912.84
heart, embryo E12.CNhs11015.353-12F513.13
heart, embryo E13.CNhs11013.376-3I913.50
heart, embryo E14.CNhs10597.403-26D413.26
heart, embryo E15.CNhs11017.431-16C817.12
heart, embryo E16.CNhs11021.457-17C614.96
heart, embryo E17.CNhs11025.479-18E515.35
heart, embryo E18.CNhs11030.1283-20G312.07
heart, neonate N00.CNhs11213.639-21E315.30
heart, neonate N03.CNhs11221.1349-25I213.82
heart, neonate N10.CNhs11118.749-24G112.64
heart, neonate N16.CNhs11209.782-15G111.92
heart, neonate N20.CNhs11127.821-26I617.25
heart, neonate N25.CNhs11196.1351-25D314.05
heart, neonate N30.CNhs11202.1390-42D216.10
hippocampus, adult.CNhs10478.13-16E855.94
hippocampus, neonate N00.CNhs11228.627-43G127.89
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I515.78
intestine, embryo E13.CNhs11010.381-16D516.02
intestine, embryo E15.CNhs10602.976-16D814.43
intestine, embryo E16.CNhs10585.463-22H412.91
intestine, embryo E17.CNhs10582.482-18D316.23
intestine, embryo E18.CNhs10526.1289-20F714.65
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E916.96
intestine, neonate N06.CNhs11102.688-20B815.58
intestine, neonate N07.CNhs11095.720-20F216.71
intestine, neonate N10.CNhs11098.755-23A517.16
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E310.37
intestine, neonate N30.CNhs11131.1384-42G110.16
kidney, embryo E14.CNhs10606.411-4I913.66
kidney, embryo E15.CNhs10997.434-16F816.22
kidney, embryo E16.CNhs10584.464-22A520.29
kidney, embryo E17.CNhs11028.483-18I216.50
kidney, embryo E18.CNhs11001.1288-20C712.03
kidney, neonate N00.CNhs11214.646-21G718.87
kidney, neonate N10.CNhs11206.758-6D515.75
kidney, neonate N20.CNhs11113.832-19I124.21
kidney, neonate N25.CNhs11122.1353-25F323.55
kidney, neonate N30.CNhs11203.1385-42H123.20
liver, adult pregnant day01.CNhs10466.508-5B219.27
liver, embryo E12.CNhs10601.355-15F817.69
liver, embryo E13.CNhs10524.378-3H619.26
liver, embryo E14.CNhs10594.409-16E117.09
liver, embryo E15.CNhs10520.433-16D716.84
liver, embryo E16.CNhs10523.462-17F59.89
liver, embryo E17.CNhs10510.481-18A312.48
liver, embryo E18.CNhs10579.499-43G415.54
liver, neonate N00.CNhs11117.641-24F415.08
liver, neonate N03.CNhs11123.1345-25G212.08
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H211.54
liver, neonate N10.CNhs11115.751-24B914.04
liver, neonate N20.CNhs11220.823-25A315.41
liver, neonate N25.CNhs11198.1368-26H116.86
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B117.55
lung, embryo E12.CNhs10522.354-16G218.00
lung, embryo E14.CNhs10604.404-26F814.67
lung, embryo E15.CNhs11020.432-17C515.28
lung, embryo E16.CNhs10998.458-17B616.19
lung, embryo E17.CNhs10605.480-44A611.89
lung, embryo E18.CNhs10583.1287-20I611.66
lung, neonate N00.CNhs11224.640-42C66.83
lung, neonate N06.CNhs11212.683-20E513.56
lung, neonate N07.CNhs11111.715-19A313.73
lung, neonate N10.CNhs11219.750-23E613.23
lung, neonate N20.CNhs11109.822-18A416.71
lung, neonate N25.CNhs11119.1359-25C715.71
lung, neonate N30.CNhs11133.1394-42H215.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B69.84
mammary gland, adult pregnant day19.CNhs10476.588-5H214.62
medulla oblongata, adult.CNhs10477.17-12C272.25
medulla oblongata, neonate N30.CNhs11200.1396-42A367.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.57
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.86
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.20
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I947.56
ovary, adult.CNhs10507.91-2I714.34
ovary, embryo E18.CNhs11040.505-44H720.83
ovary, neonate N00.CNhs11217.1299-22I422.32
oviduct, adult pregnant day01.CNhs10500.988-6G621.61
pancreas, adult.CNhs10486.34-16E421.24
pancreas, embryo E14.CNhs11012.405-44F423.31
pancreas, embryo E15.CNhs11042.1556-45F221.16
pancreas, embryo E16.CNhs11003.460-26E517.73
pancreas, embryo E17.CNhs10599.1558-45G317.13
pancreas, embryo E18.CNhs10580.1535-43I716.60
pancreas, neonate N00.CNhs11105.645-26G916.80
pancreas, neonate N01.CNhs11138.1531-43D717.81
pancreas, neonate N02.CNhs11139.1539-43D819.61
pancreas, neonate N16.CNhs11136.787-43B621.81
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G839.15
pituitary gland, embryo E12.CNhs11018.346-16E620.17
pituitary gland, embryo E13.CNhs11009.370-44C716.69
pituitary gland, embryo E14.CNhs11037.398-44A517.15
pituitary gland, embryo E15.CNhs10592.427-16B911.70
pituitary gland, embryo E16.CNhs11036.449-43F616.41
pituitary gland, embryo E17.CNhs11039.1265-44F515.96
pituitary gland, neonate N00.CNhs11190.1308-22E915.53
placenta, adult pregnant day10.CNhs10472.539-13I76.34
placenta, adult pregnant day17.CNhs10464.577-18G37.84
prostate, adult.CNhs10470.859-1F812.13
skin, adult.CNhs10492.30-1C313.36
skin, neonate N00.CNhs11124.650-25G49.20
skin, neonate N03.CNhs11215.662-22H38.02
skin, neonate N06.CNhs11097.693-20I510.62
skin, neonate N10.CNhs11108.762-6C47.55
small intestine, neonate N16.CNhs11114.790-21I18.16
spinal cord, adult.CNhs10505.24-13C963.04
spleen, adult.CNhs10465.25-2G217.09
spleen, embryo E16.CNhs11035.461-43C113.42
spleen, embryo E18.CNhs11011.1271-21F218.33
spleen, neonate N10.CNhs11116.752-24D116.58
spleen, neonate N20.CNhs11112.824-19H118.59
spleen, neonate N25.CNhs11099.1354-25G314.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C645.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C936.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D334.27
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E310.91
stomach, embryo E15.CNhs10603.1252-16G814.84
stomach, embryo E16.CNhs11022.459-17D413.28
stomach, embryo E17.CNhs11006.1035-18D515.89
stomach, embryo E18.CNhs10999.1286-20C614.41
stomach, neonate N03.CNhs11193.1340-24B815.10
stomach, neonate N07.CNhs11210.718-18A914.63
stomach, neonate N25.CNhs11104.1355-25E415.71
stomach, neonate N30.CNhs11134.1386-42I19.98
submandibular gland, adult.CNhs10469.59-29C112.43
testis, adult.CNhs10504.57-7G536.08
testis, embryo E13.CNhs11031.389-23F513.46
testis, embryo E15.CNhs11034.443-27C516.55
testis, embryo E16.CNhs11033.470-26G517.89
testis, embryo E17.CNhs11029.486-18I521.05
testis, embryo E18.CNhs11027.503-18G517.06
testis, neonate N00.CNhs11189.1300-22B720.89
testis, neonate N07.CNhs11222.726-26I415.23
testis, neonate N10.CNhs11204.763-44D918.56
testis, neonate N20.CNhs11110.839-18H334.55
testis, neonate N30.CNhs11130.1391-42E229.67
thymus, adult.CNhs10471.38-12B511.69
thymus, embryo E14.CNhs11041.402-44I419.26
thymus, embryo E15.CNhs11005.430-45I217.05
thymus, embryo E16.CNhs11002.456-26C520.92
thymus, embryo E17.CNhs10581.478-18C111.99
thymus, embryo E18.CNhs10595.1273-19G413.11
thymus, neonate N02.CNhs11181.1541-43F812.62
thymus, neonate N03.CNhs11137.2104-43C713.88
thymus, neonate N06.CNhs11197.681-26C410.90
thymus, neonate N07.CNhs11211.713-19D312.27
thymus, neonate N10.CNhs11194.748-24E49.28
thymus, neonate N20.CNhs11186.820-7A29.65
thymus, neonate N25.CNhs11125.1362-25G710.78
thymus, neonate N30.CNhs11132.1393-42G215.08
tongue, adult.CNhs10499.32-1B413.15
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H323.53
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F725.75
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.46
urinary bladder, adult.CNhs10481.879-12E419.90
uterus, adult pregnant day19.CNhs10497.590-15F511.07
uterus, adult.CNhs10509.92-27E513.92
vagina, adult.CNhs10502.89-27D515.01
vesicular gland, adult.CNhs10491.51-27F816.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A150.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A260.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A360.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D742.96
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A467.14
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A566.47
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A666.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A771.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A864.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A953.33
whole body, embryo E11.CNhs11014.324-5I815.05
whole body, embryo E12.CNhs10587.857-27C916.36
whole body, embryo E13.CNhs10512.372-23H218.95
whole body, embryo E14.5.CNhs10578.420-27D214.34
whole body, embryo E14.CNhs10519.395-14B119.70
whole body, embryo E16.CNhs10514.453-14F219.67
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.13
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.26
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.43
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.11
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.34
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.98
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.13
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G516.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.39
whole body, embryo E17.5.CNhs10513.490-9F916.01
whole body, embryo E17.CNhs10517.475-3I520.23
whole body, embryo E18.CNhs10516.493-3B314.97
whole body, neonate N00.CNhs10525.657-19C216.97
whole body, neonate N01.CNhs10576.659-23C613.39
whole body, neonate N06.CNhs10515.692-21D114.34
whole body, neonate N10.CNhs10518.761-6B414.14





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.75e-0823
neuroblast (sensu Vertebrata)8.75e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.50e-1554
neural tube6.11e-1452
neural rod6.11e-1452
future spinal cord6.11e-1452
neural keel6.11e-1452
neurectoderm1.59e-1264
neural plate1.59e-1264
presumptive neural plate1.59e-1264
gray matter2.42e-1134
brain3.55e-1147
future brain3.55e-1147
regional part of brain1.04e-1046
pre-chordal neural plate1.45e-1049
central nervous system3.41e-1073
anterior neural tube9.16e-1040
ecto-epithelium1.12e-0973
regional part of forebrain3.52e-0939
forebrain3.52e-0939
future forebrain3.52e-0939
nervous system5.76e-0975
brain grey matter1.15e-0829
regional part of telencephalon1.15e-0829
telencephalon1.15e-0829
occipital lobe1.96e-0710
visual cortex1.96e-0710
neocortex1.96e-0710
ectoderm-derived structure8.22e-0795
ectoderm8.22e-0795
presumptive ectoderm8.22e-0795
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