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FFCP PHASE1:Mm9::chr2:157249871..157249886,+: Difference between revisions

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{{FFCP|EntrezGene=20779|HGNC=|UniProt=|association_with_transcript=19bp_to_ENSMUST00000145715_5end|description=CAGE_peak_3_at_Src_5end|id=chr2:157249871..157249886,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!4.11e-16!49;UBERON:0003080!4.86e-14!40;UBERON:0001017!1.22e-13!73;UBERON:0005743!1.22e-13!73;UBERON:0002780!1.99e-13!39;UBERON:0001890!1.99e-13!39;UBERON:0006240!1.99e-13!39;UBERON:0000033!3.02e-13!63;UBERON:0002346!7.61e-13!71;UBERON:0003075!7.61e-13!71;UBERON:0007284!7.61e-13!71;UBERON:0000073!1.21e-12!75;UBERON:0001016!1.21e-12!75;UBERON:0000955!1.27e-12!50;UBERON:0006238!1.27e-12!50;UBERON:0002616!5.19e-12!49;UBERON:0004121!1.36e-11!102;UBERON:0000924!1.36e-11!102;UBERON:0006601!1.36e-11!102;UBERON:0001049!1.77e-11!52;UBERON:0005068!1.77e-11!52;UBERON:0006241!1.77e-11!52;UBERON:0007135!1.77e-11!52;UBERON:0002020!1.69e-10!34;UBERON:0000468!2.91e-10!333;UBERON:0002791!3.66e-10!29;UBERON:0003528!3.66e-10!29;UBERON:0001893!3.66e-10!29;UBERON:0000922!8.35e-09!328;UBERON:0000956!2.33e-08!21;UBERON:0001869!2.33e-08!21;UBERON:0000203!2.33e-08!21;UBERON:0000153!5.98e-07!94;UBERON:0002619!7.22e-07!17;UBERON:0002021!8.45e-07!10;UBERON:0000411!8.45e-07!10;UBERON:0001950!8.45e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.18e-18,49;UBERON:0003080,8.07e-16,40;UBERON:0002780,4.59e-15,39;UBERON:0001890,4.59e-15,39;UBERON:0006240,4.59e-15,39;UBERON:0002346,4.61e-15,64;UBERON:0003075,4.61e-15,64;UBERON:0007284,4.61e-15,64;UBERON:0000955,2.11e-13,47;UBERON:0006238,2.11e-13,47;UBERON:0000073,5.98e-13,54;UBERON:0001017,9.56e-13,73;UBERON:0002616,1.16e-12,46;UBERON:0004121,3.22e-12,95;UBERON:0000924,3.22e-12,95;UBERON:0006601,3.22e-12,95;UBERON:0001016,6.48e-12,75;UBERON:0010371,7.92e-12,73;UBERON:0001049,1.55e-11,52;UBERON:0005068,1.55e-11,52;UBERON:0006241,1.55e-11,52;UBERON:0007135,1.55e-11,52;UBERON:0003528,3.20e-11,29;UBERON:0002791,3.20e-11,29;UBERON:0001893,3.20e-11,29;UBERON:0002020,2.82e-10,34;UBERON:0000956,4.22e-09,21;UBERON:0001869,4.22e-09,21;UBERON:0000203,4.22e-09,21;UBERON:0002021,3.20e-08,10;UBERON:0000411,3.20e-08,10;UBERON:0001950,3.20e-08,10;UBERON:0002619,3.05e-07,17;UBERON:0010314,8.95e-07,92|phase1_expression=0.640595388419176,0.697950815278722,1.36499771816861,1.81478526784098,1.00179145989269,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0.799962113967033,0.91763712426868,1.72269589234506,0,0.430942465371778,0.570070258369122,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0.503587271902309,0.709638518536602,0.550640256485045,0,0.436050312760893,0.219686182734472,0.972149495371417,0.279972843250725,0,0,0,0,0.514518872071894,0,0.515672092277442,1.82084814773638,1.05798195854407,1.90149421051854,1.0165335962074,0,1.7997994345628,0,0,0.898800331555214,2.30530983192933,1.45165457231869,1.62007125998029,2.73422449756797,2.57085885963423,0.883474163806454,1.83736198822431,1.0543001812006,0.919218786610021,3.30347642998166,1.0214987046815,1.22885226604995,1.71452174049252,1.55528994124096,1.04182674111352,2.23346399201105,0.56276261003168,1.98637722109853,1.76777151284201,0.996601765593721,0.745597783301202,0.227178579999552,0.226714680320357,0,0.860423876981386,0,0,0,0,0,0.340860645156116,0,0.35333957451034,0.985903938436763,0,0,0,1.73192832808971,1.26679932737549,2.52762222507392,0.11418387971906,0,0.148442139064825,0.867426633830679,0.913396434936424,1.15307748628029,0.60289056221049,0.23517741427141,0.628332956648377,2.22475470960936,0.144599356919912,0.884610551949874,0.808834249737046,0.220841518460394,0,0,0.585561594023094,0.209446706813455,1.02182822083437,0,0,0,2.84602214869163,1.37250180845588,5.27748278874031,2.08589184230732,1.79000820131231,0.62336413367868,1.78465389374533,1.32391173005411,0.497627882440372,0.252722758433675,0.210441855886474,1.30120442962704,1.83921683546778,1.80062129805349,1.50704817835715,2.58538696775046,2.69038812598185,1.96773621575431,1.03481348295606,1.72454394346274,2.64748512234947,2.28736461413134,1.31517439456545,2.50242524303038,1.0447564995665,0.823128545631774,2.38841120182192,0,0,0,0.414251545071004,1.40715635988658,0,1.42046841351126,0.787056926989615,0.617068451549513,0.232533944750408,0.268273401399619,0.233530684734339,0.658239399653922,0,0.324275238183423,0.292399974850665,0,0.536825675041487,5.25724871410318,2.36680608472354,3.30418782983798,0.528901133327089,1.49301775374664,2.32236671860439,1.9330119198314,0.80673409849337,2.2237804384487,2.09248188723815,0.949058123089023,1.15289268306808,1.00534083520108,0.994782360205754,0.58489226135736,1.79763881730844,0.432276099749388,0.398282546508734,0.379335801906163,1.37098215131675,1.1270773567308,0.814605311381257,0.775809948670503,0.98190147846446,1.07502113111237,1.03327103585722,0.156998727841375,0.863780147452604,0,0.6673804228643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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20779
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=19bp_to_ENSMUST00000145715_5end
|cluster_id=chr2:157249871..157249886,+
|description=CAGE_peak_3_at_Src_5end
|id=chr2:157249871..157249886,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!4.11e-16!49;UBERON:0003080!4.86e-14!40;UBERON:0001017!1.22e-13!73;UBERON:0005743!1.22e-13!73;UBERON:0002780!1.99e-13!39;UBERON:0001890!1.99e-13!39;UBERON:0006240!1.99e-13!39;UBERON:0000033!3.02e-13!63;UBERON:0002346!7.61e-13!71;UBERON:0003075!7.61e-13!71;UBERON:0007284!7.61e-13!71;UBERON:0000073!1.21e-12!75;UBERON:0001016!1.21e-12!75;UBERON:0000955!1.27e-12!50;UBERON:0006238!1.27e-12!50;UBERON:0002616!5.19e-12!49;UBERON:0004121!1.36e-11!102;UBERON:0000924!1.36e-11!102;UBERON:0006601!1.36e-11!102;UBERON:0001049!1.77e-11!52;UBERON:0005068!1.77e-11!52;UBERON:0006241!1.77e-11!52;UBERON:0007135!1.77e-11!52;UBERON:0002020!1.69e-10!34;UBERON:0000468!2.91e-10!333;UBERON:0002791!3.66e-10!29;UBERON:0003528!3.66e-10!29;UBERON:0001893!3.66e-10!29;UBERON:0000922!8.35e-09!328;UBERON:0000956!2.33e-08!21;UBERON:0001869!2.33e-08!21;UBERON:0000203!2.33e-08!21;UBERON:0000153!5.98e-07!94;UBERON:0002619!7.22e-07!17;UBERON:0002021!8.45e-07!10;UBERON:0000411!8.45e-07!10;UBERON:0001950!8.45e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.18e-18,49;UBERON:0003080,8.07e-16,40;UBERON:0002780,4.59e-15,39;UBERON:0001890,4.59e-15,39;UBERON:0006240,4.59e-15,39;UBERON:0002346,4.61e-15,64;UBERON:0003075,4.61e-15,64;UBERON:0007284,4.61e-15,64;UBERON:0000955,2.11e-13,47;UBERON:0006238,2.11e-13,47;UBERON:0000073,5.98e-13,54;UBERON:0001017,9.56e-13,73;UBERON:0002616,1.16e-12,46;UBERON:0004121,3.22e-12,95;UBERON:0000924,3.22e-12,95;UBERON:0006601,3.22e-12,95;UBERON:0001016,6.48e-12,75;UBERON:0010371,7.92e-12,73;UBERON:0001049,1.55e-11,52;UBERON:0005068,1.55e-11,52;UBERON:0006241,1.55e-11,52;UBERON:0007135,1.55e-11,52;UBERON:0003528,3.20e-11,29;UBERON:0002791,3.20e-11,29;UBERON:0001893,3.20e-11,29;UBERON:0002020,2.82e-10,34;UBERON:0000956,4.22e-09,21;UBERON:0001869,4.22e-09,21;UBERON:0000203,4.22e-09,21;UBERON:0002021,3.20e-08,10;UBERON:0000411,3.20e-08,10;UBERON:0001950,3.20e-08,10;UBERON:0002619,3.05e-07,17;UBERON:0010314,8.95e-07,92
|phase1_expression=0.640595388419176,0.697950815278722,1.36499771816861,1.81478526784098,1.00179145989269,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.340173160604279,0,0,0.799962113967033,0.91763712426868,1.72269589234506,0,0.430942465371778,0.570070258369122,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0.503587271902309,0.709638518536602,0.550640256485045,0,0.436050312760893,0.219686182734472,0.972149495371417,0.279972843250725,0,0,0,0,0.514518872071894,0,0.515672092277442,1.82084814773638,1.05798195854407,1.90149421051854,1.0165335962074,0,1.7997994345628,0,0,0.898800331555214,2.30530983192933,1.45165457231869,1.62007125998029,2.73422449756797,2.57085885963423,0.883474163806454,1.83736198822431,1.0543001812006,0.919218786610021,3.30347642998166,1.0214987046815,1.22885226604995,1.71452174049252,1.55528994124096,1.04182674111352,2.23346399201105,0.56276261003168,1.98637722109853,1.76777151284201,0.996601765593721,0.745597783301202,0.227178579999552,0.226714680320357,0,0.860423876981386,0,0,0,0,0,0.340860645156116,0,0.35333957451034,0.985903938436763,0,0,0,1.73192832808971,1.26679932737549,2.52762222507392,0.11418387971906,0,0.148442139064825,0.867426633830679,0.913396434936424,1.15307748628029,0.60289056221049,0.23517741427141,0.628332956648377,2.22475470960936,0.144599356919912,0.884610551949874,0.808834249737046,0.220841518460394,0,0,0.585561594023094,0.209446706813455,1.02182822083437,0,0,0,2.84602214869163,1.37250180845588,5.27748278874031,2.08589184230732,1.79000820131231,0.62336413367868,1.78465389374533,1.32391173005411,0.497627882440372,0.252722758433675,0.210441855886474,1.30120442962704,1.83921683546778,1.80062129805349,1.50704817835715,2.58538696775046,2.69038812598185,1.96773621575431,1.03481348295606,1.72454394346274,2.64748512234947,2.28736461413134,1.31517439456545,2.50242524303038,1.0447564995665,0.823128545631774,2.38841120182192,0,0,0,0.414251545071004,1.40715635988658,0,1.42046841351126,0.787056926989615,0.617068451549513,0.232533944750408,0.268273401399619,0.233530684734339,0.658239399653922,0,0.324275238183423,0.292399974850665,0,0.536825675041487,5.25724871410318,2.36680608472354,3.30418782983798,0.528901133327089,1.49301775374664,2.32236671860439,1.9330119198314,0.80673409849337,2.2237804384487,2.09248188723815,0.949058123089023,1.15289268306808,1.00534083520108,0.994782360205754,0.58489226135736,1.79763881730844,0.432276099749388,0.398282546508734,0.379335801906163,1.37098215131675,1.1270773567308,0.814605311381257,0.775809948670503,0.98190147846446,1.07502113111237,1.03327103585722,0.156998727841375,0.863780147452604,0,0.667380422864376,0.589676985339609,0.224862112384854,0.202860121388503,0.482354319504834,0.50925170356284,0,0.162135226775035,0.549122826376163,0,0.744281895337007,0.312037673114561,0.505157755894224,0.538192240565737,0,1.10851914099963,1.32643988239339,1.46668478797823,2.54617628662782,0.234690248288502,2.01007508930179,1.6663054862021,1.56106918286239,0.472905432318573,1.10732344824387,2.87018583583477,0.655453258862952,1.03610989119537,1.3018415272336,0,0.54390568381871,0.491764273019036,1.93155722413313,1.28440471990234,0.703270119553219,0.327869890753351,0,2.2085575359138,0.780877488593277,2.80050417052639,1.43381278771531,0.891194696329576,1.13230612315533,0.809621403349789,0.876767573733936,1.18586333383957,4.81981974632711,0.851640511249612,1.95872164033981,0.977321756121456,0.989820737835213,1.32745138339963,2.18502572539483,0.906970670894253,0.188605079755898,0.590603785761546,0.922305443831782,1.29214146584111,0.727067458955011,0.712994756769443,0.948110273807448,0,0,1.36175842301515,2.16073312837572,2.45781499187234,3.00071849044229,2.30542303734956,2.14042581122485,1.31639216481697,1.8267896946876,0.469343416127421,0.63549621259146,0.882113592219848,0,0,0.542816324353403,0.716234064018819,0.656563598980245,0.874442509889552,0.556275906031529,0,0.82554747185289,0.185194527369712,0.753473828018764,0.136694227721025,0.686334519619568,0.509935289981566,0.279902904647316,0.138199973804424,1.90934123603023,2.68885594543965,2.03319467126849,1.18805874903981,0.627264888043406,1.31017538247707,1.21377911746339,1.07449492442937,0.523511883968059,0.90730481304255,0,0,1.79419855252775,1.15820943319968,1.94451188344048,1.93739735216597,1.35164900392623,1.17357238645754,1.8228613878153,1.04859344425711,0.241584120826006,0.288030006257865,0,1.01362607645082,0.924398614483445,1.16928740680016,1.07416017400489,0.79472541912506,0.480781798079875,0.886137163047463,0.504832249740738,0.15241361331,0.201652370273681,0.584747284438515,0.481059208201647,0.467507608726276,0.453460767230423,0,0.717710852875806,0.335769232728157,2.12508553435409,1.50145980360946,1.64836461840539,1.2862102744744,1.50471631210609,2.82375921308533,1.84130094602871,3.43737308063638,3.26521046453006,4.11049511862385,5.2877572817279,3.37511250115903,1.80128481289688,1.35942722695261,3.10656187051092,0.93408612825759,1.19707462020309,1.53660245178721,2.18796045361465,1.46729213839588,1.47074806760011,0.888986911206461,1.03017528619447,0.64183841918363,0.758091635291392,1.2673964994512,0.377252682772152,1.40462261204824,1.28050304809739,1.14870937911227,0.952587382566147,1.27472758539341,1.73618298417335,0.824171801606613,0.883193520806384,1.37147700954166,0.532427418478012,0.953744759789284,0.726732083161643,0.564656282491984,1.01537529470012,1.09756783723664,0.526139422875686,0.950628796921032,0.561142271657738,0.711810108745045,0.788035859004508,0.409231043169689,1.39443157067369,1.54325288784913,1.74867404556562,1.40358965067245,0.644613162144895,1.14772999241306,0.661774257358546,0.463735671240843
|short_description=p3@Src
}}

Revision as of 09:47, 4 August 2015

Short description:p3@Src
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Src_5end
Coexpression cluster:NA
Association with transcript: 19bp_to_ENSMUST00000145715_5end
EntrezGene:20779
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Src

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C62.59
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate1.18e-1849
anterior neural tube8.07e-1640
regional part of forebrain4.59e-1539
forebrain4.59e-1539
future forebrain4.59e-1539
neurectoderm4.61e-1564
neural plate4.61e-1564
presumptive neural plate4.61e-1564
brain2.11e-1347
future brain2.11e-1347
regional part of nervous system5.98e-1354
central nervous system9.56e-1373
regional part of brain1.16e-1246
ectoderm-derived structure3.22e-1295
ectoderm3.22e-1295
presumptive ectoderm3.22e-1295
nervous system6.48e-1275
ecto-epithelium7.92e-1273
neural tube1.55e-1152
neural rod1.55e-1152
future spinal cord1.55e-1152
neural keel1.55e-1152
brain grey matter3.20e-1129
regional part of telencephalon3.20e-1129
telencephalon3.20e-1129
gray matter2.82e-1034
cerebral cortex4.22e-0921
cerebral hemisphere4.22e-0921
pallium4.22e-0921
occipital lobe3.20e-0810
visual cortex3.20e-0810
neocortex3.20e-0810
regional part of cerebral cortex3.05e-0717
structure with developmental contribution from neural crest8.95e-0792
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