FFCP PHASE1:Mm9::chr17:29629287..29629321,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=21|UniProt=|association_with_transcript=-417bp_to_ENSMUST00000147320_5end|description=CAGE_peak_1_at_ENSMUST00000147320_5end|id=chr17:29629287..29629321,-|ontology_enrichment_celltype=CL:0000791!3.04e-08!9;CL:0000789!3.04e-08!9;CL:0002420!3.04e-08!9;CL:0002419!3.04e-08!9;CL:0000790!3.04e-08!9;CL:0000838!1.27e-07!12;CL:0000624!2.29e-07!8;CL:0000084!6.63e-07!11;CL:0000827!6.63e-07!11|ontology_enrichment_celltype_v019_2=CL:0000791,1.77e-37,9;CL:0000789,1.77e-37,9;CL:0002420,1.77e-37,9;CL:0002419,1.77e-37,9;CL:0000790,1.77e-37,9;CL:0000624,3.85e-31,8;CL:0000084,1.31e-30,11;CL:0000827,1.31e-30,11;CL:0000838,4.95e-28,12;CL:0000542,7.54e-26,13;CL:0000051,7.54e-26,13;CL:0000738,1.12e-19,17;CL:0002087,1.12e-19,17;CL:0000893,1.07e-18,6;CL:0002489,1.07e-18,6;CL:0000898,1.07e-18,6;CL:0000809,1.07e-18,6;CL:0000810,1.07e-18,6;CL:0000895,1.07e-18,6;CL:0000808,1.07e-18,6;CL:0000894,1.07e-18,6;CL:0000806,1.07e-18,6;CL:0000807,1.07e-18,6;CL:0000805,1.07e-18,6;CL:0002425,1.07e-18,6;CL:0002436,1.07e-18,6;CL:0002427,1.07e-18,6;CL:0002428,1.07e-18,6;CL:0002429,1.07e-18,6;CL:0002433,1.07e-18,6;CL:0002431,1.07e-18,6;CL:0002432,1.07e-18,6;CL:0002031,3.10e-13,25;CL:0000988,3.15e-10,32;CL:0002032,3.15e-10,32;CL:0000037,3.15e-10,32;CL:0000837,3.15e-10,32;CL:0002320,5.74e-09,46;CL:0000134,5.74e-09,46;CL:0000815,1.84e-08,1;CL:0000792,1.84e-08,1;CL:0000625,2.54e-08,1;CL:0000213,7.68e-08,1;CL:0002078,7.68e-08,1;CL:0000115,7.68e-08,1;CL:0002262,7.68e-08,1;CL:1000398,7.68e-08,1;CL:0000219,1.59e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000063!1.32e-08!35;UBERON:0000072!7.30e-08!27;UBERON:0006562!7.59e-08!24;UBERON:0001557!7.59e-08!24;UBERON:0001042!7.59e-08!24;UBERON:0008814!7.59e-08!24;UBERON:0009145!7.59e-08!24;UBERON:0002370!2.62e-07!23;UBERON:0000974!2.62e-07!23;UBERON:0004807!2.62e-07!23;UBERON:0005058!2.62e-07!23;UBERON:0003351!2.62e-07!23;UBERON:0009113!2.62e-07!23;UBERON:0003295!2.62e-07!23;UBERON:0009722!2.62e-07!23;UBERON:0005562!2.62e-07!23;UBERON:0007690!2.62e-07!23;UBERON:0003408!9.75e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.74e-09,46;UBERON:0002394,7.68e-08,1;UBERON:0001281,7.68e-08,1;UBERON:0000353,7.68e-08,1;UBERON:0003497,7.68e-08,1;UBERON:0003909,7.68e-08,1;UBERON:0003928,7.68e-08,1;UBERON:0003835,7.68e-08,1;UBERON:0003513,7.68e-08,1;UBERON:0001280,7.68e-08,1;UBERON:0004647,7.68e-08,1;UBERON:0002294,7.68e-08,1;UBERON:0001173,7.68e-08,1;UBERON:0004912,7.68e-08,1;UBERON:0005171,7.68e-08,1;UBERON:0002370,1.82e-07,23;UBERON:0000974,1.82e-07,23;UBERON:0004807,1.82e-07,23;UBERON:0005058,1.82e-07,23;UBERON:0003351,1.82e-07,23;UBERON:0009113,1.82e-07,23;UBERON:0003295,1.82e-07,23;UBERON:0009722,1.82e-07,23;UBERON:0005562,1.82e-07,23;UBERON:0007690,1.82e-07,23;UBERON:0006562,3.75e-07,24;UBERON:0003408,3.75e-07,24;UBERON:0001557,3.75e-07,24;UBERON:0001042,3.75e-07,24;UBERON:0008814,3.75e-07,24;UBERON:0009145,3.75e-07,24;UBERON:0000077,9.55e-07,35|phase1_expression=0,0,0.454999239389536,0,0,0,0,6.32704284863724,3.801295498095,3.97909694747389,0.34243593645101,0.239316476986009,2.39681021903688,5.15780374272085,0,0.404950534779652,0.699561878128147,0,0.274228867211478,0,0,0.0992909512008853,0,0,0,0.57423196411502,0,0,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0.523523743973798,0,0.683045484958446,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0.671130424230945,6.5282592781021,4.7053131879945,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0.510749352340751,0.46081959976873,0.131886287730194,0.182975287204819,0,0.837548997004143,0.56276261003168,0,0,0,0,0.075726193333184,0.0755715601067855,1.15945795480671,0.860423876981386,0,0,0,0,0,0,0,0,0,2.56652954828636,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.578397427679647,0,0.485300549842228,0,0,0,0.878342391034642,1.04723353406728,0.255457055208591,0.11981512450592,0,0.635351135365324,0.299581278809645,0,0,0,0,0.83115217823824,0.324482526135515,0.305518091550949,0.373220911830279,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.408218994907967,0.12811372028485,0.374806898238915,0,0,0,0,0,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0,0.568326998791185,0,0,0,0.473489471170421,0,0.462801338662135,0,0,0.116765342367169,0,0,0.243206428637567,0.292399974850665,0,0.268412837520744,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.140271639780637,0.189709611372772,0.147610147979602,0,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0.358794827043824,0.482443521363367,0.184753190166605,0,0.325929952884052,0,0,0,0,0.195133647857799,0,0,0.318909537314974,0,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0.35163505977661,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0.325773918707152,0,1.32745138339963,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,1.02131881726136,0,0.129358683782755,0,0,0,0.164549020602121,0.608929898229199,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0,0,0.291480836629851,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0.419854356970974,0.276399947608848,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0.537080087002444,0.39736270956253,0.240390899039938,0.443068581523732,0.302899349844443,0.228620419965,0,0.194915761479505,0.288635524920988,0.584384510907845,0.453460767230423,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0,0.229741875822453,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.644613162144895,0.382576664137687,0,0|short_description=p1@ENSMUST00000147320}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=21 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-417bp_to_ENSMUST00000147320_5end | |||
|cluster_id=chr17:29629287..29629321,- | |||
|description=CAGE_peak_1_at_ENSMUST00000147320_5end | |||
|id=chr17:29629287..29629321,- | |||
|ontology_enrichment_celltype=CL:0000791!3.04e-08!9;CL:0000789!3.04e-08!9;CL:0002420!3.04e-08!9;CL:0002419!3.04e-08!9;CL:0000790!3.04e-08!9;CL:0000838!1.27e-07!12;CL:0000624!2.29e-07!8;CL:0000084!6.63e-07!11;CL:0000827!6.63e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.77e-37,9;CL:0000789,1.77e-37,9;CL:0002420,1.77e-37,9;CL:0002419,1.77e-37,9;CL:0000790,1.77e-37,9;CL:0000624,3.85e-31,8;CL:0000084,1.31e-30,11;CL:0000827,1.31e-30,11;CL:0000838,4.95e-28,12;CL:0000542,7.54e-26,13;CL:0000051,7.54e-26,13;CL:0000738,1.12e-19,17;CL:0002087,1.12e-19,17;CL:0000893,1.07e-18,6;CL:0002489,1.07e-18,6;CL:0000898,1.07e-18,6;CL:0000809,1.07e-18,6;CL:0000810,1.07e-18,6;CL:0000895,1.07e-18,6;CL:0000808,1.07e-18,6;CL:0000894,1.07e-18,6;CL:0000806,1.07e-18,6;CL:0000807,1.07e-18,6;CL:0000805,1.07e-18,6;CL:0002425,1.07e-18,6;CL:0002436,1.07e-18,6;CL:0002427,1.07e-18,6;CL:0002428,1.07e-18,6;CL:0002429,1.07e-18,6;CL:0002433,1.07e-18,6;CL:0002431,1.07e-18,6;CL:0002432,1.07e-18,6;CL:0002031,3.10e-13,25;CL:0000988,3.15e-10,32;CL:0002032,3.15e-10,32;CL:0000037,3.15e-10,32;CL:0000837,3.15e-10,32;CL:0002320,5.74e-09,46;CL:0000134,5.74e-09,46;CL:0000815,1.84e-08,1;CL:0000792,1.84e-08,1;CL:0000625,2.54e-08,1;CL:0000213,7.68e-08,1;CL:0002078,7.68e-08,1;CL:0000115,7.68e-08,1;CL:0002262,7.68e-08,1;CL:1000398,7.68e-08,1;CL:0000219,1.59e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000063!1.32e-08!35;UBERON:0000072!7.30e-08!27;UBERON:0006562!7.59e-08!24;UBERON:0001557!7.59e-08!24;UBERON:0001042!7.59e-08!24;UBERON:0008814!7.59e-08!24;UBERON:0009145!7.59e-08!24;UBERON:0002370!2.62e-07!23;UBERON:0000974!2.62e-07!23;UBERON:0004807!2.62e-07!23;UBERON:0005058!2.62e-07!23;UBERON:0003351!2.62e-07!23;UBERON:0009113!2.62e-07!23;UBERON:0003295!2.62e-07!23;UBERON:0009722!2.62e-07!23;UBERON:0005562!2.62e-07!23;UBERON:0007690!2.62e-07!23;UBERON:0003408!9.75e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.74e-09,46;UBERON:0002394,7.68e-08,1;UBERON:0001281,7.68e-08,1;UBERON:0000353,7.68e-08,1;UBERON:0003497,7.68e-08,1;UBERON:0003909,7.68e-08,1;UBERON:0003928,7.68e-08,1;UBERON:0003835,7.68e-08,1;UBERON:0003513,7.68e-08,1;UBERON:0001280,7.68e-08,1;UBERON:0004647,7.68e-08,1;UBERON:0002294,7.68e-08,1;UBERON:0001173,7.68e-08,1;UBERON:0004912,7.68e-08,1;UBERON:0005171,7.68e-08,1;UBERON:0002370,1.82e-07,23;UBERON:0000974,1.82e-07,23;UBERON:0004807,1.82e-07,23;UBERON:0005058,1.82e-07,23;UBERON:0003351,1.82e-07,23;UBERON:0009113,1.82e-07,23;UBERON:0003295,1.82e-07,23;UBERON:0009722,1.82e-07,23;UBERON:0005562,1.82e-07,23;UBERON:0007690,1.82e-07,23;UBERON:0006562,3.75e-07,24;UBERON:0003408,3.75e-07,24;UBERON:0001557,3.75e-07,24;UBERON:0001042,3.75e-07,24;UBERON:0008814,3.75e-07,24;UBERON:0009145,3.75e-07,24;UBERON:0000077,9.55e-07,35 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,6.32704284863724,3.801295498095,3.97909694747389,0.34243593645101,0.239316476986009,2.39681021903688,5.15780374272085,0,0.404950534779652,0.699561878128147,0,0.274228867211478,0,0,0.0992909512008853,0,0,0,0.57423196411502,0,0,0,0.252030129759931,0,0,0,0,0,0,0.204169356262369,0,0,0.523523743973798,0,0.683045484958446,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,0.671130424230945,6.5282592781021,4.7053131879945,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0.510749352340751,0.46081959976873,0.131886287730194,0.182975287204819,0,0.837548997004143,0.56276261003168,0,0,0,0,0.075726193333184,0.0755715601067855,1.15945795480671,0.860423876981386,0,0,0,0,0,0,0,0,0,2.56652954828636,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.578397427679647,0,0.485300549842228,0,0,0,0.878342391034642,1.04723353406728,0.255457055208591,0.11981512450592,0,0.635351135365324,0.299581278809645,0,0,0,0,0.83115217823824,0.324482526135515,0.305518091550949,0.373220911830279,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0.408218994907967,0.12811372028485,0.374806898238915,0,0,0,0,0,0.556094498451196,0.348252166522167,0,0.199034266818493,0,0,0.568326998791185,0,0,0,0.473489471170421,0,0.462801338662135,0,0,0.116765342367169,0,0,0.243206428637567,0.292399974850665,0,0.268412837520744,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.140271639780637,0.189709611372772,0.147610147979602,0,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0.358794827043824,0.482443521363367,0.184753190166605,0,0.325929952884052,0,0,0,0,0.195133647857799,0,0,0.318909537314974,0,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0.35163505977661,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0.325773918707152,0,1.32745138339963,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,1.02131881726136,0,0.129358683782755,0,0,0,0.164549020602121,0.608929898229199,0,0.21183207086382,0,0.16488625294148,0,0.120625849856312,0,0,0.291480836629851,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0.419854356970974,0.276399947608848,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0.537080087002444,0.39736270956253,0.240390899039938,0.443068581523732,0.302899349844443,0.228620419965,0,0.194915761479505,0.288635524920988,0.584384510907845,0.453460767230423,0,0,0,0.386379188064381,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0,0.229741875822453,0,0,0.192909220463705,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0.644613162144895,0.382576664137687,0,0 | |||
|short_description=p1@ENSMUST00000147320 | |||
}} |
Latest revision as of 14:05, 4 August 2015
Short description: | p1@ENSMUST00000147320 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000147320_5end |
Coexpression cluster: | MCL_coexpression_mm9:21 |
Association with transcript: | -417bp_to_ENSMUST00000147320_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.74e-09 | 46 |
bile duct | 7.68e-08 | 1 |
hepatic sinusoid | 7.68e-08 | 1 |
parenchyma | 7.68e-08 | 1 |
abdomen blood vessel | 7.68e-08 | 1 |
sinusoid | 7.68e-08 | 1 |
digestive system duct | 7.68e-08 | 1 |
abdominal segment blood vessel | 7.68e-08 | 1 |
trunk blood vessel | 7.68e-08 | 1 |
liver parenchyma | 7.68e-08 | 1 |
liver lobule | 7.68e-08 | 1 |
biliary system | 7.68e-08 | 1 |
biliary tree | 7.68e-08 | 1 |
biliary bud | 7.68e-08 | 1 |
hepatic duct | 7.68e-08 | 1 |
thymus | 1.82e-07 | 23 |
neck | 1.82e-07 | 23 |
respiratory system epithelium | 1.82e-07 | 23 |
hemolymphoid system gland | 1.82e-07 | 23 |
pharyngeal epithelium | 1.82e-07 | 23 |
thymic region | 1.82e-07 | 23 |
pharyngeal gland | 1.82e-07 | 23 |
entire pharyngeal arch endoderm | 1.82e-07 | 23 |
thymus primordium | 1.82e-07 | 23 |
early pharyngeal endoderm | 1.82e-07 | 23 |
pharynx | 3.75e-07 | 24 |
gland of gut | 3.75e-07 | 24 |
upper respiratory tract | 3.75e-07 | 24 |
chordate pharynx | 3.75e-07 | 24 |
pharyngeal arch system | 3.75e-07 | 24 |
pharyngeal region of foregut | 3.75e-07 | 24 |
mixed endoderm/mesoderm-derived structure | 9.55e-07 | 35 |