FFCP PHASE1:Mm9::chr4:118905266..118905322,-: Difference between revisions
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{{FFCP|EntrezGene=230696|HGNC=|MCL_coexpression_id=8|UniProt=Q5EBG8|association_with_transcript=0bp_to_ENSMUST00000046260,ENSMUST00000132778,ENSMUST00000141112,ENSMUST00000144309_5end|description=CAGE_peak_1_at_AU022252_5end|id=chr4:118905266..118905322,-|ontology_enrichment_celltype=CL:0000221!1.39e-07!44;CL:0000133!1.39e-07!44;CL:0000117!2.04e-07!23;CL:0000337!2.04e-07!23;CL:0002319!3.29e-07!43|ontology_enrichment_celltype_v019_2=CL:0000221,1.39e-07,44;CL:0000133,1.39e-07,44;CL:0000117,2.04e-07,23;CL:0000337,2.04e-07,23;CL:0002319,3.29e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.30e-12!73;UBERON:0005743!6.30e-12!73;UBERON:0000073!1.76e-11!75;UBERON:0001016!1.76e-11!75;UBERON:0002346!3.05e-11!71;UBERON:0003075!3.05e-11!71;UBERON:0007284!3.05e-11!71;UBERON:0004121!6.35e-11!102;UBERON:0000924!6.35e-11!102;UBERON:0006601!6.35e-11!102;UBERON:0000025!7.45e-11!114;UBERON:0000033!9.82e-11!63;UBERON:0004111!5.53e-10!122;UBERON:0003056!1.13e-09!49;UBERON:0001049!1.37e-09!52;UBERON:0005068!1.37e-09!52;UBERON:0006241!1.37e-09!52;UBERON:0007135!1.37e-09!52;UBERON:0000955!1.52e-08!50;UBERON:0006238!1.52e-08!50;UBERON:0002616!1.73e-08!49;UBERON:0002780!1.65e-07!39;UBERON:0001890!1.65e-07!39;UBERON:0006240!1.65e-07!39;UBERON:0003080!1.71e-07!40;UBERON:0002020!2.73e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.51e-13,92;UBERON:0001017,6.30e-12,73;UBERON:0002346,1.06e-11,64;UBERON:0003075,1.06e-11,64;UBERON:0007284,1.06e-11,64;UBERON:0001016,1.76e-11,75;UBERON:0004121,4.53e-11,95;UBERON:0000924,4.53e-11,95;UBERON:0006601,4.53e-11,95;UBERON:0000025,7.45e-11,114;UBERON:0004111,5.53e-10,122;UBERON:0010371,5.83e-10,73;UBERON:0000073,6.54e-10,54;UBERON:0003056,1.13e-09,49;UBERON:0001049,1.37e-09,52;UBERON:0005068,1.37e-09,52;UBERON:0006241,1.37e-09,52;UBERON:0007135,1.37e-09,52;UBERON:0000955,4.91e-08,47;UBERON:0006238,4.91e-08,47;UBERON:0002616,5.56e-08,46;UBERON:0002780,1.65e-07,39;UBERON:0001890,1.65e-07,39;UBERON:0006240,1.65e-07,39;UBERON:0003080,1.71e-07,40;UBERON:0002020,2.73e-07,34|phase1_expression=17.4562243344225,5.58360652222978,10.9199817453489,6.95667686005709,7.01254021924886,9.40123922706583,8.64366770203445,7.87652272993615,8.58811205125167,10.2988391581677,14.0398733944914,13.9601278241839,8.38883576662908,11.0149707047937,8.99396356902289,7.08663435864391,8.39474253753776,8.3597473819933,9.73512478600745,12.7316895539409,18.7095238332354,8.93618560807968,9.40319240900167,7.1996590257033,8.71755268055246,9.18771142584032,5.59990595006797,7.11055067863434,6.84084310042946,6.5527833737582,11.3082560434205,13.9706748161119,19.6820732027062,31.6963362030877,14.1537293678125,12.9663023379624,10.8209758819056,2.09265815368454,2.3440060335714,2.09409497589519,2.94115744015507,4.09827290975067,4.36959317728038,5.03587271902309,4.66333883609767,8.81024410376071,17.9950009200049,16.7879370412944,14.9386604259441,16.5265414213141,13.4386964760348,20.125359011096,6.37573903019398,5.07753499407941,5.71359458542189,11.8339340576536,12.6074713573053,12.8918023069361,24.0756588422921,26.4495489636016,20.9164363157039,23.041428180701,15.1180115338894,15.7482450524245,11.8663963508037,12.7886420690298,18.5752068521411,23.8215349299364,19.3899575016853,21.6009501330705,19.5602214056785,21.1381728458815,23.6329338818226,18.2511290830282,21.3735400370667,19.3035945188104,17.6185409599022,15.9609172606485,16.7431121249305,20.0467157349895,19.6698433745181,18.7528813400434,15.355064945076,12.9435400307286,15.5854212732346,14.142172102736,18.2235751422852,20.3175395949578,11.8132861599767,13.3005945787943,8.40607017234866,37.858650587181,43.518165357296,65.3040861881759,60.4292068226332,50.1790113549016,23.4542181620026,10.5666799998396,11.1707981979234,9.18682893726885,20.703982707172,7.69958864485907,7.64415719119937,0,10.6080610095495,10.387754484479,10.1104889002957,24.663718019317,7.50919862576798,10.5393918736026,17.1750473498474,14.6143429589828,17.5267777914604,17.4838263041042,10.8181610564848,11.9383261763192,9.88779870937496,10.1219549843938,4.42305275974937,13.2648816956876,12.367125033782,15.5160081003271,9.31958806090611,12.8823550685081,15.4990563041957,8.9409969323007,2.99537811264801,5.39912457894067,4.06624726633807,14.8292733010774,16.9275223042892,18.0942267042525,15.8180131374972,16.3657892691412,14.7529511637288,19.6311928311987,10.0820970211813,10.698999472468,9.85618757891331,11.1534183619831,20.4289095451445,21.1509936078795,21.6074555766419,18.8381022294644,17.4853802818913,19.8576266441517,20.9891863013793,15.5222022443409,17.8921434134259,20.9907748986279,21.8179393963297,20.1660073833369,12.5121262151519,14.626590993931,12.7584924572925,20.6995637491233,4.91549231119264,4.88961023517959,3.9782889915383,19.2626968458017,16.1822981386956,16.7457717158744,13.9679393995274,18.6926020160034,16.1980468531747,15.3472403535269,10.9992094573844,14.5956677958962,16.2914251414346,14.9392392311977,16.7812435759921,17.5439984910399,14.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:230696 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5EBG8 | |||
|association_with_transcript=0bp_to_ENSMUST00000046260,ENSMUST00000132778,ENSMUST00000141112,ENSMUST00000144309_5end | |||
|cluster_id=chr4:118905266..118905322,- | |||
|description=CAGE_peak_1_at_AU022252_5end | |||
|id=chr4:118905266..118905322,- | |||
|ontology_enrichment_celltype=CL:0000221!1.39e-07!44;CL:0000133!1.39e-07!44;CL:0000117!2.04e-07!23;CL:0000337!2.04e-07!23;CL:0002319!3.29e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.39e-07,44;CL:0000133,1.39e-07,44;CL:0000117,2.04e-07,23;CL:0000337,2.04e-07,23;CL:0002319,3.29e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.30e-12!73;UBERON:0005743!6.30e-12!73;UBERON:0000073!1.76e-11!75;UBERON:0001016!1.76e-11!75;UBERON:0002346!3.05e-11!71;UBERON:0003075!3.05e-11!71;UBERON:0007284!3.05e-11!71;UBERON:0004121!6.35e-11!102;UBERON:0000924!6.35e-11!102;UBERON:0006601!6.35e-11!102;UBERON:0000025!7.45e-11!114;UBERON:0000033!9.82e-11!63;UBERON:0004111!5.53e-10!122;UBERON:0003056!1.13e-09!49;UBERON:0001049!1.37e-09!52;UBERON:0005068!1.37e-09!52;UBERON:0006241!1.37e-09!52;UBERON:0007135!1.37e-09!52;UBERON:0000955!1.52e-08!50;UBERON:0006238!1.52e-08!50;UBERON:0002616!1.73e-08!49;UBERON:0002780!1.65e-07!39;UBERON:0001890!1.65e-07!39;UBERON:0006240!1.65e-07!39;UBERON:0003080!1.71e-07!40;UBERON:0002020!2.73e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.51e-13,92;UBERON:0001017,6.30e-12,73;UBERON:0002346,1.06e-11,64;UBERON:0003075,1.06e-11,64;UBERON:0007284,1.06e-11,64;UBERON:0001016,1.76e-11,75;UBERON:0004121,4.53e-11,95;UBERON:0000924,4.53e-11,95;UBERON:0006601,4.53e-11,95;UBERON:0000025,7.45e-11,114;UBERON:0004111,5.53e-10,122;UBERON:0010371,5.83e-10,73;UBERON:0000073,6.54e-10,54;UBERON:0003056,1.13e-09,49;UBERON:0001049,1.37e-09,52;UBERON:0005068,1.37e-09,52;UBERON:0006241,1.37e-09,52;UBERON:0007135,1.37e-09,52;UBERON:0000955,4.91e-08,47;UBERON:0006238,4.91e-08,47;UBERON:0002616,5.56e-08,46;UBERON:0002780,1.65e-07,39;UBERON:0001890,1.65e-07,39;UBERON:0006240,1.65e-07,39;UBERON:0003080,1.71e-07,40;UBERON:0002020,2.73e-07,34 | |||
|phase1_expression=17.4562243344225,5.58360652222978,10.9199817453489,6.95667686005709,7.01254021924886,9.40123922706583,8.64366770203445,7.87652272993615,8.58811205125167,10.2988391581677,14.0398733944914,13.9601278241839,8.38883576662908,11.0149707047937,8.99396356902289,7.08663435864391,8.39474253753776,8.3597473819933,9.73512478600745,12.7316895539409,18.7095238332354,8.93618560807968,9.40319240900167,7.1996590257033,8.71755268055246,9.18771142584032,5.59990595006797,7.11055067863434,6.84084310042946,6.5527833737582,11.3082560434205,13.9706748161119,19.6820732027062,31.6963362030877,14.1537293678125,12.9663023379624,10.8209758819056,2.09265815368454,2.3440060335714,2.09409497589519,2.94115744015507,4.09827290975067,4.36959317728038,5.03587271902309,4.66333883609767,8.81024410376071,17.9950009200049,16.7879370412944,14.9386604259441,16.5265414213141,13.4386964760348,20.125359011096,6.37573903019398,5.07753499407941,5.71359458542189,11.8339340576536,12.6074713573053,12.8918023069361,24.0756588422921,26.4495489636016,20.9164363157039,23.041428180701,15.1180115338894,15.7482450524245,11.8663963508037,12.7886420690298,18.5752068521411,23.8215349299364,19.3899575016853,21.6009501330705,19.5602214056785,21.1381728458815,23.6329338818226,18.2511290830282,21.3735400370667,19.3035945188104,17.6185409599022,15.9609172606485,16.7431121249305,20.0467157349895,19.6698433745181,18.7528813400434,15.355064945076,12.9435400307286,15.5854212732346,14.142172102736,18.2235751422852,20.3175395949578,11.8132861599767,13.3005945787943,8.40607017234866,37.858650587181,43.518165357296,65.3040861881759,60.4292068226332,50.1790113549016,23.4542181620026,10.5666799998396,11.1707981979234,9.18682893726885,20.703982707172,7.69958864485907,7.64415719119937,0,10.6080610095495,10.387754484479,10.1104889002957,24.663718019317,7.50919862576798,10.5393918736026,17.1750473498474,14.6143429589828,17.5267777914604,17.4838263041042,10.8181610564848,11.9383261763192,9.88779870937496,10.1219549843938,4.42305275974937,13.2648816956876,12.367125033782,15.5160081003271,9.31958806090611,12.8823550685081,15.4990563041957,8.9409969323007,2.99537811264801,5.39912457894067,4.06624726633807,14.8292733010774,16.9275223042892,18.0942267042525,15.8180131374972,16.3657892691412,14.7529511637288,19.6311928311987,10.0820970211813,10.698999472468,9.85618757891331,11.1534183619831,20.4289095451445,21.1509936078795,21.6074555766419,18.8381022294644,17.4853802818913,19.8576266441517,20.9891863013793,15.5222022443409,17.8921434134259,20.9907748986279,21.8179393963297,20.1660073833369,12.5121262151519,14.626590993931,12.7584924572925,20.6995637491233,4.91549231119264,4.88961023517959,3.9782889915383,19.2626968458017,16.1822981386956,16.7457717158744,13.9679393995274,18.6926020160034,16.1980468531747,15.3472403535269,10.9992094573844,14.5956677958962,16.2914251414346,14.9392392311977,16.7812435759921,17.5439984910399,14.0512073786272,17.312628020088,21.449574753541,17.3908794920991,6.93879444265976,8.46241813323342,21.7554015545939,16.2565670302307,14.9486255133628,9.07575860805041,10.8965241483986,14.0766963323294,6.64340686162316,9.38784041926862,12.5667604400135,9.94782360205754,11.307917052909,10.7858329038507,7.99710784536369,8.96135729644652,20.4841333029328,13.481324487948,13.5249282807697,13.0336849821001,13.9645790760691,12.764719220038,14.7341131499519,13.8753539100826,16.9558626068685,20.1137377192535,47.4324203339438,10.8449318715461,13.3660116676978,9.89393294493356,11.5630269191447,10.3706178693539,11.9674150337267,15.8232875597946,29.3464760462814,36.2421065408268,37.3797336971122,39.4469404528614,34.6361817157162,61.3766673411482,63.8654792138007,87.3222773667695,10.5309318394965,22.9284608242287,16.7853925735287,13.5796068620151,11.4998221661366,14.7405506548798,16.901098502907,14.2447562936193,12.6108115284953,13.9522754478728,15.3076577911188,8.1931657357869,15.5416483679306,11.5719246865209,3.01582567878545,4.89515115436839,9.83528546038072,13.2449638226272,14.6101036888891,18.4022347949759,17.3771042099276,19.6927323219411,14.8288863125641,15.2271110275689,13.1408272617007,14.3381278771531,13.1451217708613,14.4369030702305,12.5491317519217,14.6127928955656,13.4397844501818,15.4234231882467,10.6455063906201,14.6013795007149,9.44744364250741,10.8880281161873,14.6019652173959,10.4395673546642,16.9301191900261,13.2023555829129,14.7650946440386,14.7568871013085,9.8202751403924,11.2695456138027,9.26893183800275,13.2735438333043,20.0295356292498,19.5957532171555,13.2771446243977,21.2472090956946,21.7322588755028,22.2910516432856,15.9606210278046,17.3017753074008,15.4676079365994,14.0053876592716,11.4989136951218,11.0152676849186,7.49796553386871,10.2229476823718,12.9171541356724,12.2435237604156,11.340372680298,10.0125948844487,9.61886760878507,17.2445530869774,7.86006051670122,10.7321171340876,8.14855920426731,7.91147519419702,7.51818252465638,7.0921233694022,3.39956859987711,3.49878630809145,3.73139929271944,1.90934123603023,18.3474876277058,17.282154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| |||
|short_description=p1@AU022252 | |||
}} |
Revision as of 16:01, 4 August 2015
Short description: | p1@AU022252 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AU022252_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000046260, ENSMUST00000132778, ENSMUST00000141112, ENSMUST00000144309_5end |
EntrezGene: | 230696 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.39e-07 | 44 |
neurectodermal cell | 1.39e-07 | 44 |
CNS neuron (sensu Vertebrata) | 2.04e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.04e-07 | 23 |
neural cell | 3.29e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 9.51e-13 | 92 |
central nervous system | 6.30e-12 | 73 |
neurectoderm | 1.06e-11 | 64 |
neural plate | 1.06e-11 | 64 |
presumptive neural plate | 1.06e-11 | 64 |
nervous system | 1.76e-11 | 75 |
ectoderm-derived structure | 4.53e-11 | 95 |
ectoderm | 4.53e-11 | 95 |
presumptive ectoderm | 4.53e-11 | 95 |
tube | 7.45e-11 | 114 |
anatomical conduit | 5.53e-10 | 122 |
ecto-epithelium | 5.83e-10 | 73 |
regional part of nervous system | 6.54e-10 | 54 |
pre-chordal neural plate | 1.13e-09 | 49 |
neural tube | 1.37e-09 | 52 |
neural rod | 1.37e-09 | 52 |
future spinal cord | 1.37e-09 | 52 |
neural keel | 1.37e-09 | 52 |
brain | 4.91e-08 | 47 |
future brain | 4.91e-08 | 47 |
regional part of brain | 5.56e-08 | 46 |
regional part of forebrain | 1.65e-07 | 39 |
forebrain | 1.65e-07 | 39 |
future forebrain | 1.65e-07 | 39 |
anterior neural tube | 1.71e-07 | 40 |
gray matter | 2.73e-07 | 34 |