FFCP PHASE1:Mm9::chr12:109873953..109874049,+: Difference between revisions
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{{FFCP|EntrezGene=14026|HGNC=|MCL_coexpression_id=1890|UniProt=E9PVP4,Q6PB99|association_with_transcript=0bp_to_ENSMUST00000172409,NM_001163396,uc007ozy.1,uc007ozz.1_5end|description=CAGE_peak_3_at_Evl_5end|id=chr12:109873953..109874049,+|ontology_enrichment_celltype=CL:0000988!6.05e-11!32;CL:0002032!6.05e-11!32;CL:0000037!6.05e-11!32;CL:0000566!6.05e-11!32;CL:0000837!6.05e-11!32;CL:0002031!3.89e-10!25;CL:0000738!6.16e-10!17;CL:0002087!6.16e-10!17;CL:0000838!1.57e-08!12;CL:0000084!6.39e-08!11;CL:0000827!6.39e-08!11;CL:0000542!1.47e-07!13;CL:0000051!1.47e-07!13;CL:0000791!8.81e-07!9;CL:0000789!8.81e-07!9;CL:0002420!8.81e-07!9;CL:0002419!8.81e-07!9;CL:0000790!8.81e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,3.05e-11,32;CL:0002032,3.05e-11,32;CL:0000037,3.05e-11,32;CL:0000837,3.05e-11,32;CL:0002031,1.91e-10,25;CL:0000738,5.34e-10,17;CL:0002087,5.34e-10,17;CL:0000838,1.39e-08,12;CL:0000084,5.73e-08,11;CL:0000827,5.73e-08,11;CL:0000542,1.32e-07,13;CL:0000051,1.32e-07,13;CL:0000791,8.05e-07,9;CL:0000789,8.05e-07,9;CL:0002420,8.05e-07,9;CL:0002419,8.05e-07,9;CL:0000790,8.05e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.44e-21!70;UBERON:0002193!1.11e-20!48;UBERON:0002390!5.83e-19!45;UBERON:0003061!5.83e-19!45;UBERON:0005057!1.38e-11!51;UBERON:0001041!1.37e-10!92;UBERON:0004177!1.54e-10!29;UBERON:0000077!4.07e-10!97;UBERON:0003081!1.14e-09!88;UBERON:0002371!2.11e-09!16;UBERON:0000926!3.96e-09!193;UBERON:0004120!3.96e-09!193;UBERON:0006603!3.96e-09!193;UBERON:0001007!1.68e-08!128;UBERON:0001555!1.68e-08!128;UBERON:0007026!1.68e-08!128;UBERON:0001474!1.91e-08!22;UBERON:0004765!1.91e-08!22;UBERON:0001434!1.91e-08!22;UBERON:0004119!2.75e-08!130;UBERON:0000925!2.75e-08!130;UBERON:0006595!2.75e-08!130;UBERON:0004921!7.44e-08!126;UBERON:0004185!7.44e-08!126;UBERON:0003408!7.50e-08!24;UBERON:0003104!8.25e-08!131;UBERON:0009142!8.25e-08!131;UBERON:0002370!1.70e-07!23;UBERON:0000974!1.70e-07!23;UBERON:0004807!1.70e-07!23;UBERON:0005058!1.70e-07!23;UBERON:0003351!1.70e-07!23;UBERON:0009113!1.70e-07!23;UBERON:0003295!1.70e-07!23;UBERON:0009722!1.70e-07!23;UBERON:0005562!1.70e-07!23;UBERON:0007690!1.70e-07!23;UBERON:0002530!3.49e-07!65;UBERON:0006562!6.68e-07!24;UBERON:0001557!6.68e-07!24;UBERON:0001042!6.68e-07!24;UBERON:0008814!6.68e-07!24;UBERON:0009145!6.68e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.31e-21,48;UBERON:0002405,4.31e-21,48;UBERON:0002390,2.35e-19,45;UBERON:0003061,2.35e-19,45;UBERON:0004177,7.71e-11,29;UBERON:0005057,7.71e-11,29;UBERON:0001041,1.67e-10,80;UBERON:0002371,1.85e-09,16;UBERON:0003081,4.43e-09,87;UBERON:0001474,1.42e-08,22;UBERON:0004765,1.42e-08,22;UBERON:0001434,1.42e-08,22;UBERON:0000077,1.47e-08,35;UBERON:0001007,2.07e-08,116;UBERON:0001555,2.07e-08,116;UBERON:0007026,2.07e-08,116;UBERON:0004119,3.52e-08,118;UBERON:0000925,3.52e-08,118;UBERON:0006595,3.52e-08,118;UBERON:0003408,4.10e-08,24;UBERON:0004921,9.28e-08,114;UBERON:0002370,9.38e-08,23;UBERON:0000974,9.38e-08,23;UBERON:0004807,9.38e-08,23;UBERON:0005058,9.38e-08,23;UBERON:0003351,9.38e-08,23;UBERON:0009113,9.38e-08,23;UBERON:0003295,9.38e-08,23;UBERON:0009722,9.38e-08,23;UBERON:0005562,9.38e-08,23;UBERON:0007690,9.38e-08,23;UBERON:0006562,3.85e-07,24;UBERON:0001557,3.85e-07,24;UBERON:0001042,3.85e-07,24;UBERON:0008814,3.85e-07,24;UBERON:0009145,3.85e-07,24;UBERON:0002530,4.58e-07,65|phase1_expression=1.12104192973356,0,0.454999239389536,0,0,0,0,359.866702431673,32.8037722613384,29.9602593692152,32.0177600581694,35.817699388906,411.052952564825,436.052967265959,23.9839028507277,48.7965394409481,16.0899231969474,226.028641479177,200.187073064379,191.399732960912,7.82398269389842,67.4185558654011,47.7995614124252,23.6788785734242,25.693839479523,0,0,0,2.66032787238923,4.03248207615889,3.54768817048488,0,0,0,0,0,0,4.60384793810598,20.3147189576188,15.1821885752402,4.1176204162171,3.41522742479223,4.85510353031154,0,0,0,0.782391344348039,0,0,0,0,0,132.380476179554,180.615173360825,228.879877216018,1.28629718017973,4.87106847895886,2.06268836910977,0.606949382578793,1.5869729378161,0.633831403506179,0,0,138.584556461335,237.327927016074,173.357148046848,52.1304192302024,35.348084089583,0.518448061542388,1.08004750665353,1.68259969081106,1.71390590642282,3.09215957332259,0.367472397644862,1.15014565221884,0,2.20231761998777,3.06449611404451,2.15049146558741,1.05509030184155,1.28082701043374,0,2.79182999001381,2.8138130501584,2.59757021220577,2.06240009831567,2.56269025438385,1.86399445825301,0.984440513331393,0.0755715601067855,0.869593466105033,8.60423876981386,0,0.539703191637817,1.29955283489534,1.79210754838934,10.3928870897496,0,0,0,0,0,0,0,0,0,0,10.0481814152773,261.527262483643,10.8362761517322,2.4287945747259,3.95805121805784,2.53677046981664,2.26083960828934,2.82212897125692,2.38766523526383,0.741584903203122,9.54355755671417,19.4614321428972,5.3383060482645,17.0047969214503,21.3345111379498,0,1.17112318804619,1.04723353406728,10.7291963187608,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14026 | |||
|HGNC= | |||
|MCL_coexpression_id=1890 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PVP4,uniprot:Q6PB99 | |||
|association_with_transcript=0bp_to_ENSMUST00000172409,NM_001163396,uc007ozy.1,uc007ozz.1_5end | |||
|cluster_id=chr12:109873953..109874049,+ | |||
|description=CAGE_peak_3_at_Evl_5end | |||
|id=chr12:109873953..109874049,+ | |||
|ontology_enrichment_celltype=CL:0000988!6.05e-11!32;CL:0002032!6.05e-11!32;CL:0000037!6.05e-11!32;CL:0000566!6.05e-11!32;CL:0000837!6.05e-11!32;CL:0002031!3.89e-10!25;CL:0000738!6.16e-10!17;CL:0002087!6.16e-10!17;CL:0000838!1.57e-08!12;CL:0000084!6.39e-08!11;CL:0000827!6.39e-08!11;CL:0000542!1.47e-07!13;CL:0000051!1.47e-07!13;CL:0000791!8.81e-07!9;CL:0000789!8.81e-07!9;CL:0002420!8.81e-07!9;CL:0002419!8.81e-07!9;CL:0000790!8.81e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.05e-11,32;CL:0002032,3.05e-11,32;CL:0000037,3.05e-11,32;CL:0000837,3.05e-11,32;CL:0002031,1.91e-10,25;CL:0000738,5.34e-10,17;CL:0002087,5.34e-10,17;CL:0000838,1.39e-08,12;CL:0000084,5.73e-08,11;CL:0000827,5.73e-08,11;CL:0000542,1.32e-07,13;CL:0000051,1.32e-07,13;CL:0000791,8.05e-07,9;CL:0000789,8.05e-07,9;CL:0002420,8.05e-07,9;CL:0002419,8.05e-07,9;CL:0000790,8.05e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.44e-21!70;UBERON:0002193!1.11e-20!48;UBERON:0002390!5.83e-19!45;UBERON:0003061!5.83e-19!45;UBERON:0005057!1.38e-11!51;UBERON:0001041!1.37e-10!92;UBERON:0004177!1.54e-10!29;UBERON:0000077!4.07e-10!97;UBERON:0003081!1.14e-09!88;UBERON:0002371!2.11e-09!16;UBERON:0000926!3.96e-09!193;UBERON:0004120!3.96e-09!193;UBERON:0006603!3.96e-09!193;UBERON:0001007!1.68e-08!128;UBERON:0001555!1.68e-08!128;UBERON:0007026!1.68e-08!128;UBERON:0001474!1.91e-08!22;UBERON:0004765!1.91e-08!22;UBERON:0001434!1.91e-08!22;UBERON:0004119!2.75e-08!130;UBERON:0000925!2.75e-08!130;UBERON:0006595!2.75e-08!130;UBERON:0004921!7.44e-08!126;UBERON:0004185!7.44e-08!126;UBERON:0003408!7.50e-08!24;UBERON:0003104!8.25e-08!131;UBERON:0009142!8.25e-08!131;UBERON:0002370!1.70e-07!23;UBERON:0000974!1.70e-07!23;UBERON:0004807!1.70e-07!23;UBERON:0005058!1.70e-07!23;UBERON:0003351!1.70e-07!23;UBERON:0009113!1.70e-07!23;UBERON:0003295!1.70e-07!23;UBERON:0009722!1.70e-07!23;UBERON:0005562!1.70e-07!23;UBERON:0007690!1.70e-07!23;UBERON:0002530!3.49e-07!65;UBERON:0006562!6.68e-07!24;UBERON:0001557!6.68e-07!24;UBERON:0001042!6.68e-07!24;UBERON:0008814!6.68e-07!24;UBERON:0009145!6.68e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.31e-21,48;UBERON:0002405,4.31e-21,48;UBERON:0002390,2.35e-19,45;UBERON:0003061,2.35e-19,45;UBERON:0004177,7.71e-11,29;UBERON:0005057,7.71e-11,29;UBERON:0001041,1.67e-10,80;UBERON:0002371,1.85e-09,16;UBERON:0003081,4.43e-09,87;UBERON:0001474,1.42e-08,22;UBERON:0004765,1.42e-08,22;UBERON:0001434,1.42e-08,22;UBERON:0000077,1.47e-08,35;UBERON:0001007,2.07e-08,116;UBERON:0001555,2.07e-08,116;UBERON:0007026,2.07e-08,116;UBERON:0004119,3.52e-08,118;UBERON:0000925,3.52e-08,118;UBERON:0006595,3.52e-08,118;UBERON:0003408,4.10e-08,24;UBERON:0004921,9.28e-08,114;UBERON:0002370,9.38e-08,23;UBERON:0000974,9.38e-08,23;UBERON:0004807,9.38e-08,23;UBERON:0005058,9.38e-08,23;UBERON:0003351,9.38e-08,23;UBERON:0009113,9.38e-08,23;UBERON:0003295,9.38e-08,23;UBERON:0009722,9.38e-08,23;UBERON:0005562,9.38e-08,23;UBERON:0007690,9.38e-08,23;UBERON:0006562,3.85e-07,24;UBERON:0001557,3.85e-07,24;UBERON:0001042,3.85e-07,24;UBERON:0008814,3.85e-07,24;UBERON:0009145,3.85e-07,24;UBERON:0002530,4.58e-07,65 | |||
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| |||
|short_description=p3@Evl | |||
}} |
Revision as of 16:28, 4 August 2015
Short description: | p3@Evl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Evl_5end |
Coexpression cluster: | MCL_coexpression_mm9:1890 |
Association with transcript: | 0bp_to_ENSMUST00000172409, NM_001163396, uc007ozy.1, uc007ozz.1_5end |
EntrezGene: | 14026 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.05e-11 | 32 |
hematopoietic oligopotent progenitor cell | 3.05e-11 | 32 |
hematopoietic stem cell | 3.05e-11 | 32 |
hematopoietic multipotent progenitor cell | 3.05e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 1.91e-10 | 25 |
leukocyte | 5.34e-10 | 17 |
nongranular leukocyte | 5.34e-10 | 17 |
lymphoid lineage restricted progenitor cell | 1.39e-08 | 12 |
T cell | 5.73e-08 | 11 |
pro-T cell | 5.73e-08 | 11 |
lymphocyte | 1.32e-07 | 13 |
common lymphoid progenitor | 1.32e-07 | 13 |
mature alpha-beta T cell | 8.05e-07 | 9 |
alpha-beta T cell | 8.05e-07 | 9 |
immature T cell | 8.05e-07 | 9 |
mature T cell | 8.05e-07 | 9 |
immature alpha-beta T cell | 8.05e-07 | 9 |