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FFCP PHASE1:Mm9::chr9:121404769..121404790,-: Difference between revisions

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{{FFCP|EntrezGene=12424|HGNC=|MCL_coexpression_id=2|UniProt=Q8R041|association_with_transcript=-12bp_to_ENSMUST00000060307_5end|description=CAGE_peak_1_at_Cck_5end|id=chr9:121404769..121404790,-|ontology_enrichment_celltype=CL:0000540!6.82e-08!33;CL:0000047!6.82e-08!33;CL:0000031!6.82e-08!33;CL:0000404!6.82e-08!33|ontology_enrichment_celltype_v019_2=CL:0000540,3.49e-08,33;CL:0000047,3.49e-08,33;CL:0000031,3.49e-08,33;CL:0000404,3.49e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.85e-17!73;UBERON:0005743!1.85e-17!73;UBERON:0000073!2.72e-17!75;UBERON:0001016!2.72e-17!75;UBERON:0004121!5.11e-16!102;UBERON:0000924!5.11e-16!102;UBERON:0006601!5.11e-16!102;UBERON:0001049!2.95e-14!52;UBERON:0005068!2.95e-14!52;UBERON:0006241!2.95e-14!52;UBERON:0007135!2.95e-14!52;UBERON:0000955!7.66e-14!50;UBERON:0006238!7.66e-14!50;UBERON:0002346!1.40e-13!71;UBERON:0003075!1.40e-13!71;UBERON:0007284!1.40e-13!71;UBERON:0000033!2.16e-13!63;UBERON:0002616!2.94e-13!49;UBERON:0003056!1.18e-11!49;UBERON:0003080!2.36e-11!40;UBERON:0002780!7.68e-11!39;UBERON:0001890!7.68e-11!39;UBERON:0006240!7.68e-11!39;UBERON:0002020!3.02e-10!34;UBERON:0002791!3.26e-08!29;UBERON:0003528!3.26e-08!29;UBERON:0001893!3.26e-08!29;UBERON:0002021!3.31e-08!10;UBERON:0000411!3.31e-08!10;UBERON:0001950!3.31e-08!10;UBERON:0000160!1.74e-07!43;UBERON:0007811!7.13e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.17e-18,73;UBERON:0001016,1.06e-17,75;UBERON:0004121,1.45e-17,95;UBERON:0000924,1.45e-17,95;UBERON:0006601,1.45e-17,95;UBERON:0002346,1.37e-16,64;UBERON:0003075,1.37e-16,64;UBERON:0007284,1.37e-16,64;UBERON:0000073,2.86e-16,54;UBERON:0001049,5.28e-15,52;UBERON:0005068,5.28e-15,52;UBERON:0006241,5.28e-15,52;UBERON:0007135,5.28e-15,52;UBERON:0010371,1.46e-14,73;UBERON:0000955,8.19e-13,47;UBERON:0006238,8.19e-13,47;UBERON:0003056,2.78e-12,49;UBERON:0002616,3.22e-12,46;UBERON:0003080,5.74e-12,40;UBERON:0002780,2.00e-11,39;UBERON:0001890,2.00e-11,39;UBERON:0006240,2.00e-11,39;UBERON:0000160,5.35e-11,31;UBERON:0002020,8.50e-11,34;UBERON:0003528,1.20e-08,29;UBERON:0002791,1.20e-08,29;UBERON:0001893,1.20e-08,29;UBERON:0002021,1.38e-08,10;UBERON:0000411,1.38e-08,10;UBERON:0001950,1.38e-08,10;UBERON:0005409,3.02e-07,47;UBERON:0000956,6.52e-07,21;UBERON:0001869,6.52e-07,21;UBERON:0000203,6.52e-07,21;UBERON:0002619,6.56e-07,17|phase1_expression=0.160148847104794,12.563114675017,12.739978702907,9.98131897312539,9.5170188689806,844.600616988718,892.400287074908,0,0,0,0,0,0,0,0,0,0,0,0,0,119.740952532706,0,0,361.262890667512,342.508056633285,51.6808767703518,96.4906871396328,143.503840968802,31.1638407908453,40.5768508913488,70.5103023883869,0,0,0,18.1976520443303,57.8496565847553,15.5168710759401,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0.573066879877513,0,28.7289374420629,40.2033144246745,29.7900759647904,0,0,1.3498495759221,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,4.35496371695606,6.21027316325777,4.6271491497304,91.4083150092171,131.195913325258,11.8816075238505,9.4887016308054,8.27296907949019,352.370819198044,450.863990778798,388.010103005271,10.5509030184155,12.4423195299277,5.73004707612436,94.3638536624668,119.868435936748,210.708783684221,105.182405014099,100.656778324966,113.144463615957,3.55913108665965,10.5044468548432,0.869593466105033,0,0,0,0,0,45.0826588622923,0,0,0,0.422530259330042,0,0,0,0,0,0,37.6806803072898,0,0.445326417194474,7.80683970447611,3.65358573974569,1.15307748628029,0.904335843315735,0.23517741427141,0.502666365318702,5.93267922562497,0.144599356919912,0,5.01477234836968,0.441683036920787,0.484875253135222,5.59175283654366,116.233976413584,121.26964324499,120.831187113664,0,0,0,201.168828720677,184.830243538725,14.7015591972051,1321.58630642188,1182.42827469545,418.692909787514,415.824357242663,0.305518091550949,1.11966273549084,0.505445516867349,33.4602550859494,13.0120442962704,6.43725892413724,7.02242306240862,4.06903008156431,10.0013653752452,12.811372028485,13.118241438362,48.894937069674,0.862271971731369,0.567318240503458,0.703804496655795,6.57587197282724,0.278047249225598,9.05455632957633,5.55611768301447,4.17971960318836,0,0,0,3.93538967817454,1.40715635988658,0.36012412292203,0.473489471170421,0.787056926989615,0.617068451549513,0.930135779001631,0.804820204198858,0.233530684734339,0.658239399653922,1.97000956894914,0.648550476366846,0.584799949701329,0.219550115291051,0.536825675041487,1040.30437554674,256.335389436798,474.481372364734,148.885669031575,30.5002198265385,21.1335371392999,23.1961430379768,100.640078787048,128.979265430025,151.229372759485,133.817195355552,119.406742174908,97.015390596904,113.604145535497,104.11082252161,115.04888430774,105.259230288976,104.549168458543,7.77638393907635,4.68418901699888,3.38123207019241,4.2766778847516,4.26695471768777,5.19005067188357,57.9879045429439,91.2230714513941,100.322187090638,72.9277238777841,0,3.3369021143218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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:12424
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=uniprot:Q8R041
|association_with_transcript=-12bp_to_ENSMUST00000060307_5end
|cluster_id=chr9:121404769..121404790,-
|description=CAGE_peak_1_at_Cck_5end
|id=chr9:121404769..121404790,-
|ontology_enrichment_celltype=CL:0000540!6.82e-08!33;CL:0000047!6.82e-08!33;CL:0000031!6.82e-08!33;CL:0000404!6.82e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000540,3.49e-08,33;CL:0000047,3.49e-08,33;CL:0000031,3.49e-08,33;CL:0000404,3.49e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.85e-17!73;UBERON:0005743!1.85e-17!73;UBERON:0000073!2.72e-17!75;UBERON:0001016!2.72e-17!75;UBERON:0004121!5.11e-16!102;UBERON:0000924!5.11e-16!102;UBERON:0006601!5.11e-16!102;UBERON:0001049!2.95e-14!52;UBERON:0005068!2.95e-14!52;UBERON:0006241!2.95e-14!52;UBERON:0007135!2.95e-14!52;UBERON:0000955!7.66e-14!50;UBERON:0006238!7.66e-14!50;UBERON:0002346!1.40e-13!71;UBERON:0003075!1.40e-13!71;UBERON:0007284!1.40e-13!71;UBERON:0000033!2.16e-13!63;UBERON:0002616!2.94e-13!49;UBERON:0003056!1.18e-11!49;UBERON:0003080!2.36e-11!40;UBERON:0002780!7.68e-11!39;UBERON:0001890!7.68e-11!39;UBERON:0006240!7.68e-11!39;UBERON:0002020!3.02e-10!34;UBERON:0002791!3.26e-08!29;UBERON:0003528!3.26e-08!29;UBERON:0001893!3.26e-08!29;UBERON:0002021!3.31e-08!10;UBERON:0000411!3.31e-08!10;UBERON:0001950!3.31e-08!10;UBERON:0000160!1.74e-07!43;UBERON:0007811!7.13e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.17e-18,73;UBERON:0001016,1.06e-17,75;UBERON:0004121,1.45e-17,95;UBERON:0000924,1.45e-17,95;UBERON:0006601,1.45e-17,95;UBERON:0002346,1.37e-16,64;UBERON:0003075,1.37e-16,64;UBERON:0007284,1.37e-16,64;UBERON:0000073,2.86e-16,54;UBERON:0001049,5.28e-15,52;UBERON:0005068,5.28e-15,52;UBERON:0006241,5.28e-15,52;UBERON:0007135,5.28e-15,52;UBERON:0010371,1.46e-14,73;UBERON:0000955,8.19e-13,47;UBERON:0006238,8.19e-13,47;UBERON:0003056,2.78e-12,49;UBERON:0002616,3.22e-12,46;UBERON:0003080,5.74e-12,40;UBERON:0002780,2.00e-11,39;UBERON:0001890,2.00e-11,39;UBERON:0006240,2.00e-11,39;UBERON:0000160,5.35e-11,31;UBERON:0002020,8.50e-11,34;UBERON:0003528,1.20e-08,29;UBERON:0002791,1.20e-08,29;UBERON:0001893,1.20e-08,29;UBERON:0002021,1.38e-08,10;UBERON:0000411,1.38e-08,10;UBERON:0001950,1.38e-08,10;UBERON:0005409,3.02e-07,47;UBERON:0000956,6.52e-07,21;UBERON:0001869,6.52e-07,21;UBERON:0000203,6.52e-07,21;UBERON:0002619,6.56e-07,17
|phase1_expression=0.160148847104794,12.563114675017,12.739978702907,9.98131897312539,9.5170188689806,844.600616988718,892.400287074908,0,0,0,0,0,0,0,0,0,0,0,0,0,119.740952532706,0,0,361.262890667512,342.508056633285,51.6808767703518,96.4906871396328,143.503840968802,31.1638407908453,40.5768508913488,70.5103023883869,0,0,0,18.1976520443303,57.8496565847553,15.5168710759401,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0.219686182734472,0,0.419959264876088,0,0,0,0,0,0.573066879877513,0,28.7289374420629,40.2033144246745,29.7900759647904,0,0,1.3498495759221,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,4.35496371695606,6.21027316325777,4.6271491497304,91.4083150092171,131.195913325258,11.8816075238505,9.4887016308054,8.27296907949019,352.370819198044,450.863990778798,388.010103005271,10.5509030184155,12.4423195299277,5.73004707612436,94.3638536624668,119.868435936748,210.708783684221,105.182405014099,100.656778324966,113.144463615957,3.55913108665965,10.5044468548432,0.869593466105033,0,0,0,0,0,45.0826588622923,0,0,0,0.422530259330042,0,0,0,0,0,0,37.6806803072898,0,0.445326417194474,7.80683970447611,3.65358573974569,1.15307748628029,0.904335843315735,0.23517741427141,0.502666365318702,5.93267922562497,0.144599356919912,0,5.01477234836968,0.441683036920787,0.484875253135222,5.59175283654366,116.233976413584,121.26964324499,120.831187113664,0,0,0,201.168828720677,184.830243538725,14.7015591972051,1321.58630642188,1182.42827469545,418.692909787514,415.824357242663,0.305518091550949,1.11966273549084,0.505445516867349,33.4602550859494,13.0120442962704,6.43725892413724,7.02242306240862,4.06903008156431,10.0013653752452,12.811372028485,13.118241438362,48.894937069674,0.862271971731369,0.567318240503458,0.703804496655795,6.57587197282724,0.278047249225598,9.05455632957633,5.55611768301447,4.17971960318836,0,0,0,3.93538967817454,1.40715635988658,0.36012412292203,0.473489471170421,0.787056926989615,0.617068451549513,0.930135779001631,0.804820204198858,0.233530684734339,0.658239399653922,1.97000956894914,0.648550476366846,0.584799949701329,0.219550115291051,0.536825675041487,1040.30437554674,256.335389436798,474.481372364734,148.885669031575,30.5002198265385,21.1335371392999,23.1961430379768,100.640078787048,128.979265430025,151.229372759485,133.817195355552,119.406742174908,97.015390596904,113.604145535497,104.11082252161,115.04888430774,105.259230288976,104.549168458543,7.77638393907635,4.68418901699888,3.38123207019241,4.2766778847516,4.26695471768777,5.19005067188357,57.9879045429439,91.2230714513941,100.322187090638,72.9277238777841,0,3.33690211432188,0.786235980452812,0.449724224769707,0.608580364165509,0.241177159752417,1.78238096246994,0.287696137450811,0,0,0,0,0,0,0,0,0,3.03186258832776,0.325929952884052,0.848725428875941,0.234690248288502,0.837531287209079,0.476087281772027,0.585400943573396,0.157635144106191,0,0,0,0,0,0,0,567.004206790949,187.085113994609,95.5276010427362,71.2647054480595,0.163934945376675,3.02965112645248,50.7968233260173,50.757036758563,101.679843729881,18.161628644394,19.3834846451683,19.5322806244294,129.134613834291,97.6134565423782,96.0549300410052,590.26725826686,0.141940085208269,2.49291845134157,0.977321756121456,1.15479086080775,0,80.3603905672989,29.3253850255809,9.9960692270626,9.15435867930396,3.3817866273832,38.7642439752332,0.363533729477506,0.712994756769443,0.632073515871632,0,0,12.2558258071364,5.76195500900193,20.3093133538925,23.148399783412,51.4286677562593,40.8464592308742,56.1112160253233,106.258267240995,29.0992917999001,4.2366414172764,0.220528398054962,7.91454014119104,0.807322133479528,1.32688434841943,1.79058516004705,0.656563598980245,98.8120036175194,140.923229527987,0,0.82554747185289,0.185194527369712,0.376736914009382,0,0,0,0,0,4.77335309007557,46.817727050008,7.5228202836934,27.1093405462721,11.4998562807958,23.364794320841,1.88810084938749,4.62859352061881,2.6175594198403,13.4799572223465,45.3577698553456,0,2.54178128274764,1.15820943319968,0.388902376688095,0,0,0.117357238645754,0,0,0.241584120826006,0.288030006257865,5.68820017130721,4.45995473638361,6.16265742988964,3.63778304337826,3.04345382634718,3.9736270956253,3.4856680360791,3.2491695978407,2.92802704849628,2.057583779685,1.00826185136841,2.53390489923356,1.15454209968395,1.8700304349051,4.98806843953465,0,0.538283139656854,4.36500002546604,24.341888848056,9.94717119891265,1.09890974560359,0.857473516316263,0,994.527994848654,1129.63813038861,1034.64929727155,898.104730928111,1602.40801374353,1451.867070783,1474.24914050626,1514.88052764628,1696.56517923686,1672.88356727013,2.49089634202024,3.19219898720825,5.63420898988643,14.5864030240976,12.7864029203069,12.685202083051,21.1134391411534,18.5431551515005,19.8969909946925,16.6780159764106,22.0526990904509,19.9943921869241,13.3907355681932,14.5337095959053,14.703480052637,20.0043350338891,11.1248952907061,12.3461901096771,13.1867488257058,18.6942628570685,19.8864166383541,19.8772902898458,14.0677352068919,17.4415699958794,18.4454385614048,17.4306092256854,16.8293735042951,17.6256706663355,14.6668442953531,18.5176949647054,16.6089025373844,13.5936185678278,14.3230865109391,14.5640630714808,15.8183421004536,21.9833308585392,21.0538447600868,23.2060738372162,14.3466249051633,8.6030653456611,11.1296561097802
|short_description=p1@Cck
}}

Revision as of 18:22, 4 August 2015

Short description:p1@Cck
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cck_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -12bp_to_ENSMUST00000060307_5end
EntrezGene:12424
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cck

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.98
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7844.60
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8892.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3119.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1361.26
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2342.51
GP2+ M cell, pool1.CNhs13228.11845-124H951.68
GP2+ M cell, pool2.CNhs13231.11846-124I196.49
GP2+ M cell, pool3.CNhs13240.11847-124I2143.50
Ileum epithelium, pool1.CNhs13199.10252-104B931.16
Ileum epithelium, pool2.CNhs13232.10253-104C140.58
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C870.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F518.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F657.85
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F715.52
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C328.73
Mouse Granule cells, donor2.CNhs12357.11731-123E340.20
Mouse Granule cells, donor3.CNhs12108.11636-122C729.79
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F191.41
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5131.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3352.37
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3450.86
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7388.01
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.55
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E494.36
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5119.87
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6210.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6105.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6100.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1113.14
Mouse Schwann, donor1.CNhs12507.11728-123D93.56
Mouse Schwann, donor2.CNhs12573.11746-123F910.50
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A745.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B637.68
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C57.81
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F55.01
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B2116.23
cerebellum, neonate N30.CNhs11135.1395-42I2121.27
colon, adult.CNhs10468.36-18H7120.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4201.17
corpus striatum, adult.CNhs10487.19-21D8184.83
corpus striatum, neonate N00.CNhs11226.630-43F114.70
cortex, adult.CNhs10473.12-14D51321.59
cortex, neonate N30.CNhs11107.1392-42F21182.43
diencephalon, adult.CNhs10482.20-12F2418.69
diencephalon, neonate N30.CNhs11201.1388-42B2415.82
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G433.46
eyeball, embryo E12.CNhs11016.345-16C613.01
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C97.02
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C610.00
eyeball, neonate N01.CNhs11140.1532-43E712.81
eyeball, neonate N02.CNhs11205.1551-44G813.12
eyeball, neonate N16.CNhs11188.777-19A248.89
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A86.58
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C49.05
forelimb, embryo E18.CNhs11008.1520-43B55.56
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81040.30
hippocampus, neonate N00.CNhs11228.627-43G1256.34
intestinal mucosa, adult.CNhs10506.860-29I3474.48
intestine, adult.CNhs10496.178-9A3148.89
intestine, embryo E12.CNhs11019.1251-16I530.50
intestine, embryo E13.CNhs11010.381-16D521.13
intestine, embryo E15.CNhs10602.976-16D823.20
intestine, embryo E16.CNhs10585.463-22H4100.64
intestine, embryo E17.CNhs10582.482-18D3128.98
intestine, embryo E18.CNhs10526.1289-20F7151.23
intestine, neonate N00.CNhs11126.644-26D1133.82
intestine, neonate N01.CNhs11192.1322-23E9119.41
intestine, neonate N06.CNhs11102.688-20B897.02
intestine, neonate N07.CNhs11095.720-20F2113.60
intestine, neonate N10.CNhs11098.755-23A5104.11
intestine, neonate N20.CNhs11187.827-18D1115.05
intestine, neonate N25.CNhs11121.1352-25E3105.26
intestine, neonate N30.CNhs11131.1384-42G1104.55
kidney, embryo E14.CNhs10606.411-4I97.78
kidney, embryo E15.CNhs10997.434-16F84.68
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G75.19
kidney, neonate N10.CNhs11206.758-6D557.99
kidney, neonate N20.CNhs11113.832-19I191.22
kidney, neonate N25.CNhs11122.1353-25F3100.32
kidney, neonate N30.CNhs11203.1385-42H172.93
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B6567.00
mammary gland, adult pregnant day19.CNhs10476.588-5H2187.09
medulla oblongata, adult.CNhs10477.17-12C295.53
medulla oblongata, neonate N30.CNhs11200.1396-42A371.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E150.80
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E250.76
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3101.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.16
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.38
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D919.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4129.13
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D597.61
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D696.05
olfactory brain, adult.CNhs10489.18-22I9590.27
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F480.36
pancreas, embryo E15.CNhs11042.1556-45F229.33
pancreas, embryo E16.CNhs11003.460-26E510.00
pancreas, embryo E17.CNhs10599.1558-45G39.15
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G938.76
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G812.26
pituitary gland, embryo E12.CNhs11018.346-16E65.76
pituitary gland, embryo E13.CNhs11009.370-44C720.31
pituitary gland, embryo E14.CNhs11037.398-44A523.15
pituitary gland, embryo E15.CNhs10592.427-16B951.43
pituitary gland, embryo E16.CNhs11036.449-43F640.85
pituitary gland, embryo E17.CNhs11039.1265-44F556.11
pituitary gland, neonate N00.CNhs11190.1308-22E9106.26
placenta, adult pregnant day10.CNhs10472.539-13I729.10
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C37.91
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I198.81
spinal cord, adult.CNhs10505.24-13C9140.92
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E346.82
stomach, embryo E15.CNhs10603.1252-16G87.52
stomach, embryo E16.CNhs11022.459-17D427.11
stomach, embryo E17.CNhs11006.1035-18D511.50
stomach, embryo E18.CNhs10999.1286-20C623.36
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A94.63
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I113.48
submandibular gland, adult.CNhs10469.59-29C145.36
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I26.16
thymus, embryo E16.CNhs11002.456-26C53.64
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F83.49
thymus, neonate N03.CNhs11137.2104-43C73.25
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D32.06
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A22.53
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.37
urinary bladder, adult.CNhs10481.879-12E424.34
uterus, adult pregnant day19.CNhs10497.590-15F59.95
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1994.53
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21129.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31034.65
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7898.10
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41602.41
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51451.87
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61474.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71514.88
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81696.57
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91672.88
whole body, embryo E11.CNhs11014.324-5I82.49
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H25.63
whole body, embryo E14.5.CNhs10578.420-27D214.59
whole body, embryo E14.CNhs10519.395-14B112.79
whole body, embryo E16.CNhs10514.453-14F212.69
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G521.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.90
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.68
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G522.05
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.53
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G518.69
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G519.88
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.07
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.43
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.56
whole body, embryo E17.5.CNhs10513.490-9F915.82
whole body, embryo E17.CNhs10517.475-3I521.98
whole body, embryo E18.CNhs10516.493-3B321.05
whole body, neonate N00.CNhs10525.657-19C223.21
whole body, neonate N01.CNhs10576.659-23C614.35
whole body, neonate N06.CNhs10515.692-21D18.60
whole body, neonate N10.CNhs10518.761-6B411.13





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.49e-0833
neuronal stem cell3.49e-0833
neuroblast3.49e-0833
electrically signaling cell3.49e-0833

Uber anatomy
Ontology termp-valuen
central nervous system7.17e-1873
nervous system1.06e-1775
ectoderm-derived structure1.45e-1795
ectoderm1.45e-1795
presumptive ectoderm1.45e-1795
neurectoderm1.37e-1664
neural plate1.37e-1664
presumptive neural plate1.37e-1664
regional part of nervous system2.86e-1654
neural tube5.28e-1552
neural rod5.28e-1552
future spinal cord5.28e-1552
neural keel5.28e-1552
ecto-epithelium1.46e-1473
brain8.19e-1347
future brain8.19e-1347
pre-chordal neural plate2.78e-1249
regional part of brain3.22e-1246
anterior neural tube5.74e-1240
regional part of forebrain2.00e-1139
forebrain2.00e-1139
future forebrain2.00e-1139
intestine5.35e-1131
gray matter8.50e-1134
brain grey matter1.20e-0829
regional part of telencephalon1.20e-0829
telencephalon1.20e-0829
occipital lobe1.38e-0810
visual cortex1.38e-0810
neocortex1.38e-0810
gastrointestinal system3.02e-0747
cerebral cortex6.52e-0721
cerebral hemisphere6.52e-0721
pallium6.52e-0721
regional part of cerebral cortex6.56e-0717
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