FFCP PHASE1:Mm9::chr1:135586579..135586593,-: Difference between revisions
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{{FFCP|EntrezGene=240754|HGNC=|MCL_coexpression_id=1739|UniProt=Q8BHB3|association_with_transcript=0bp_to_ENSMUST00000063620,NM_172842,uc007cqt.2_5end|description=CAGE_peak_2_at_Lax1_5end|id=chr1:135586579..135586593,-|ontology_enrichment_celltype=CL:0000838!1.28e-10!12;CL:0002031!8.34e-10!25;CL:0000084!1.21e-09!11;CL:0000827!1.21e-09!11;CL:0000542!1.77e-09!13;CL:0000051!1.77e-09!13;CL:0000988!6.21e-09!32;CL:0002032!6.21e-09!32;CL:0000037!6.21e-09!32;CL:0000566!6.21e-09!32;CL:0000837!6.21e-09!32;CL:0000791!4.16e-08!9;CL:0000789!4.16e-08!9;CL:0002420!4.16e-08!9;CL:0002419!4.16e-08!9;CL:0000790!4.16e-08!9;CL:0000553!3.61e-07!6;CL:0000556!3.61e-07!6;CL:0000624!3.92e-07!8|ontology_enrichment_celltype_v019_2=CL:0002031,4.09e-17,25;CL:0000553,8.92e-14,6;CL:0000556,8.92e-14,6;CL:0000838,1.64e-13,12;CL:0000988,1.48e-12,32;CL:0002032,1.48e-12,32;CL:0000037,1.48e-12,32;CL:0000837,1.48e-12,32;CL:0000542,2.48e-12,13;CL:0000051,2.48e-12,13;CL:0000084,1.36e-11,11;CL:0000827,1.36e-11,11;CL:0000738,5.21e-09,17;CL:0002087,5.21e-09,17;CL:0000050,6.69e-09,9;CL:0000791,1.58e-08,9;CL:0000789,1.58e-08,9;CL:0002420,1.58e-08,9;CL:0002419,1.58e-08,9;CL:0000790,1.58e-08,9;CL:0002320,1.19e-07,46;CL:0000134,1.19e-07,46;CL:0002027,4.56e-07,3;CL:0002006,4.56e-07,3;CL:0002024,4.56e-07,3;CL:0000624,9.55e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.35e-18!48;UBERON:0004177!6.05e-17!29;UBERON:0002390!6.27e-16!45;UBERON:0003061!6.27e-16!45;UBERON:0002405!7.27e-14!70;UBERON:0002370!1.29e-12!23;UBERON:0000974!1.29e-12!23;UBERON:0004807!1.29e-12!23;UBERON:0005058!1.29e-12!23;UBERON:0003351!1.29e-12!23;UBERON:0009113!1.29e-12!23;UBERON:0003295!1.29e-12!23;UBERON:0009722!1.29e-12!23;UBERON:0005562!1.29e-12!23;UBERON:0007690!1.29e-12!23;UBERON:0006562!8.66e-12!24;UBERON:0003408!8.66e-12!24;UBERON:0001557!8.66e-12!24;UBERON:0001042!8.66e-12!24;UBERON:0008814!8.66e-12!24;UBERON:0009145!8.66e-12!24;UBERON:0005057!1.02e-10!51;UBERON:0000072!1.07e-09!27;UBERON:0003081!1.46e-09!88;UBERON:0000065!4.85e-09!41;UBERON:0001004!1.27e-08!42;UBERON:0000063!5.88e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.36e-31,48;UBERON:0002405,6.36e-31,48;UBERON:0002390,1.44e-25,45;UBERON:0003061,1.44e-25,45;UBERON:0004177,2.86e-23,29;UBERON:0005057,2.86e-23,29;UBERON:0000077,1.89e-18,35;UBERON:0002370,2.81e-18,23;UBERON:0000974,2.81e-18,23;UBERON:0004807,2.81e-18,23;UBERON:0005058,2.81e-18,23;UBERON:0003351,2.81e-18,23;UBERON:0009113,2.81e-18,23;UBERON:0003295,2.81e-18,23;UBERON:0009722,2.81e-18,23;UBERON:0005562,2.81e-18,23;UBERON:0007690,2.81e-18,23;UBERON:0006562,2.32e-17,24;UBERON:0003408,2.32e-17,24;UBERON:0001557,2.32e-17,24;UBERON:0001042,2.32e-17,24;UBERON:0008814,2.32e-17,24;UBERON:0009145,2.32e-17,24;UBERON:0000072,5.05e-15,27;UBERON:0003081,2.96e-11,87;UBERON:0007811,2.29e-10,36;UBERON:0000065,4.76e-10,41;UBERON:0001004,1.02e-09,42;UBERON:0000153,4.09e-08,43;UBERON:0002465,6.83e-08,3;UBERON:0002384,1.19e-07,46;UBERON:0001041,3.94e-07,80|phase1_expression=0,0,0,0,0,0,0,5.81054955487093,1.54867594366833,0.70219357896598,0.34243593645101,0.239316476986009,3.59521532855532,2.53519167015092,2.33176833270964,3.84703008040669,2.09868563438444,16.4040325986284,16.1795031654772,21.2194825899015,0.340173160604279,2.97872853602656,1.04479915655574,4.15980299262857,5.04700418347774,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,7.55021727259814,4.35217285206807,7.73015738027667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.79928715803342,17.8667139716548,0.593768556259299,0.173485326766136,0,0,0,0,0,0,0.289198713839823,1.76922110389975,0,0.220841518460394,0,0,0,0,2.29911349687732,0.718890747035522,0,0.381210681219194,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0.252722758433675,0,0,0.229902104433473,0,0,0,0,0,0,0.215567992932842,0,0.527853372491847,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0.439100230582101,0.268412837520744,0,0,0.991256348951394,0.793351699990633,0,0,0,0,0.22237804384487,0,0.949058123089023,0,0,0.596869416123452,0,0,0,0.398282546508734,0,0,0,0,0,0,0.126473074248515,0,0,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0,0,2.40179147216586,0.189491411770485,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0.655453258862952,0.690739927463582,0.144649058581512,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0.119372344003136,0,0.874442509889552,0,6.4930934703184,0.206386867963223,0.370389054739423,2.26042148405629,3.14396723758358,4.11800711771741,5.60928818979723,10.4963589242744,8.29199842826543,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,3.47612232690996,1.01362607645082,1.95150818613172,2.20865399062252,1.61124026100733,1.98681354781265,0.961563596159751,1.77227432609493,1.31256384932592,1.21930890648,1.00826185136841,1.16949456887703,1.05833025804362,1.05189211963412,0,0,0.269141569828427,0,0.579568782096571,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421|short_description=p2@Lax1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:240754 | |||
|HGNC= | |||
|MCL_coexpression_id=1739 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BHB3 | |||
|association_with_transcript=0bp_to_ENSMUST00000063620,NM_172842,uc007cqt.2_5end | |||
|cluster_id=chr1:135586579..135586593,- | |||
|description=CAGE_peak_2_at_Lax1_5end | |||
|id=chr1:135586579..135586593,- | |||
|ontology_enrichment_celltype=CL:0000838!1.28e-10!12;CL:0002031!8.34e-10!25;CL:0000084!1.21e-09!11;CL:0000827!1.21e-09!11;CL:0000542!1.77e-09!13;CL:0000051!1.77e-09!13;CL:0000988!6.21e-09!32;CL:0002032!6.21e-09!32;CL:0000037!6.21e-09!32;CL:0000566!6.21e-09!32;CL:0000837!6.21e-09!32;CL:0000791!4.16e-08!9;CL:0000789!4.16e-08!9;CL:0002420!4.16e-08!9;CL:0002419!4.16e-08!9;CL:0000790!4.16e-08!9;CL:0000553!3.61e-07!6;CL:0000556!3.61e-07!6;CL:0000624!3.92e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,4.09e-17,25;CL:0000553,8.92e-14,6;CL:0000556,8.92e-14,6;CL:0000838,1.64e-13,12;CL:0000988,1.48e-12,32;CL:0002032,1.48e-12,32;CL:0000037,1.48e-12,32;CL:0000837,1.48e-12,32;CL:0000542,2.48e-12,13;CL:0000051,2.48e-12,13;CL:0000084,1.36e-11,11;CL:0000827,1.36e-11,11;CL:0000738,5.21e-09,17;CL:0002087,5.21e-09,17;CL:0000050,6.69e-09,9;CL:0000791,1.58e-08,9;CL:0000789,1.58e-08,9;CL:0002420,1.58e-08,9;CL:0002419,1.58e-08,9;CL:0000790,1.58e-08,9;CL:0002320,1.19e-07,46;CL:0000134,1.19e-07,46;CL:0002027,4.56e-07,3;CL:0002006,4.56e-07,3;CL:0002024,4.56e-07,3;CL:0000624,9.55e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.35e-18!48;UBERON:0004177!6.05e-17!29;UBERON:0002390!6.27e-16!45;UBERON:0003061!6.27e-16!45;UBERON:0002405!7.27e-14!70;UBERON:0002370!1.29e-12!23;UBERON:0000974!1.29e-12!23;UBERON:0004807!1.29e-12!23;UBERON:0005058!1.29e-12!23;UBERON:0003351!1.29e-12!23;UBERON:0009113!1.29e-12!23;UBERON:0003295!1.29e-12!23;UBERON:0009722!1.29e-12!23;UBERON:0005562!1.29e-12!23;UBERON:0007690!1.29e-12!23;UBERON:0006562!8.66e-12!24;UBERON:0003408!8.66e-12!24;UBERON:0001557!8.66e-12!24;UBERON:0001042!8.66e-12!24;UBERON:0008814!8.66e-12!24;UBERON:0009145!8.66e-12!24;UBERON:0005057!1.02e-10!51;UBERON:0000072!1.07e-09!27;UBERON:0003081!1.46e-09!88;UBERON:0000065!4.85e-09!41;UBERON:0001004!1.27e-08!42;UBERON:0000063!5.88e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.36e-31,48;UBERON:0002405,6.36e-31,48;UBERON:0002390,1.44e-25,45;UBERON:0003061,1.44e-25,45;UBERON:0004177,2.86e-23,29;UBERON:0005057,2.86e-23,29;UBERON:0000077,1.89e-18,35;UBERON:0002370,2.81e-18,23;UBERON:0000974,2.81e-18,23;UBERON:0004807,2.81e-18,23;UBERON:0005058,2.81e-18,23;UBERON:0003351,2.81e-18,23;UBERON:0009113,2.81e-18,23;UBERON:0003295,2.81e-18,23;UBERON:0009722,2.81e-18,23;UBERON:0005562,2.81e-18,23;UBERON:0007690,2.81e-18,23;UBERON:0006562,2.32e-17,24;UBERON:0003408,2.32e-17,24;UBERON:0001557,2.32e-17,24;UBERON:0001042,2.32e-17,24;UBERON:0008814,2.32e-17,24;UBERON:0009145,2.32e-17,24;UBERON:0000072,5.05e-15,27;UBERON:0003081,2.96e-11,87;UBERON:0007811,2.29e-10,36;UBERON:0000065,4.76e-10,41;UBERON:0001004,1.02e-09,42;UBERON:0000153,4.09e-08,43;UBERON:0002465,6.83e-08,3;UBERON:0002384,1.19e-07,46;UBERON:0001041,3.94e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,5.81054955487093,1.54867594366833,0.70219357896598,0.34243593645101,0.239316476986009,3.59521532855532,2.53519167015092,2.33176833270964,3.84703008040669,2.09868563438444,16.4040325986284,16.1795031654772,21.2194825899015,0.340173160604279,2.97872853602656,1.04479915655574,4.15980299262857,5.04700418347774,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,7.55021727259814,4.35217285206807,7.73015738027667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.79928715803342,17.8667139716548,0.593768556259299,0.173485326766136,0,0,0,0,0,0,0.289198713839823,1.76922110389975,0,0.220841518460394,0,0,0,0,2.29911349687732,0.718890747035522,0,0.381210681219194,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0.252722758433675,0,0,0.229902104433473,0,0,0,0,0,0,0.215567992932842,0,0.527853372491847,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0.439100230582101,0.268412837520744,0,0,0.991256348951394,0.793351699990633,0,0,0,0,0.22237804384487,0,0.949058123089023,0,0,0.596869416123452,0,0,0,0.398282546508734,0,0,0,0,0,0,0.126473074248515,0,0,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0,0,2.40179147216586,0.189491411770485,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0.655453258862952,0.690739927463582,0.144649058581512,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0.119372344003136,0,0.874442509889552,0,6.4930934703184,0.206386867963223,0.370389054739423,2.26042148405629,3.14396723758358,4.11800711771741,5.60928818979723,10.4963589242744,8.29199842826543,0,0,0,0,0.209088296014469,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,3.47612232690996,1.01362607645082,1.95150818613172,2.20865399062252,1.61124026100733,1.98681354781265,0.961563596159751,1.77227432609493,1.31256384932592,1.21930890648,1.00826185136841,1.16949456887703,1.05833025804362,1.05189211963412,0,0,0.269141569828427,0,0.579568782096571,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Lax1 | |||
}} |
Revision as of 19:36, 4 August 2015
Short description: | p2@Lax1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lax1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1739 |
Association with transcript: | 0bp_to_ENSMUST00000063620, NM_172842, uc007cqt.2_5end |
EntrezGene: | 240754 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 4.09e-17 | 25 |
megakaryocyte progenitor cell | 8.92e-14 | 6 |
megakaryocyte | 8.92e-14 | 6 |
lymphoid lineage restricted progenitor cell | 1.64e-13 | 12 |
hematopoietic cell | 1.48e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.48e-12 | 32 |
hematopoietic stem cell | 1.48e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.48e-12 | 32 |
lymphocyte | 2.48e-12 | 13 |
common lymphoid progenitor | 2.48e-12 | 13 |
T cell | 1.36e-11 | 11 |
pro-T cell | 1.36e-11 | 11 |
leukocyte | 5.21e-09 | 17 |
nongranular leukocyte | 5.21e-09 | 17 |
megakaryocyte-erythroid progenitor cell | 6.69e-09 | 9 |
mature alpha-beta T cell | 1.58e-08 | 9 |
alpha-beta T cell | 1.58e-08 | 9 |
immature T cell | 1.58e-08 | 9 |
mature T cell | 1.58e-08 | 9 |
immature alpha-beta T cell | 1.58e-08 | 9 |
connective tissue cell | 1.19e-07 | 46 |
mesenchymal cell | 1.19e-07 | 46 |
CD9-positive, CD41-positive megakaryocyte cell | 4.56e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 4.56e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 4.56e-07 | 3 |
CD4-positive, alpha-beta T cell | 9.55e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.36e-31 | 48 |
immune system | 6.36e-31 | 48 |
hematopoietic system | 1.44e-25 | 45 |
blood island | 1.44e-25 | 45 |
hemopoietic organ | 2.86e-23 | 29 |
immune organ | 2.86e-23 | 29 |
mixed endoderm/mesoderm-derived structure | 1.89e-18 | 35 |
thymus | 2.81e-18 | 23 |
neck | 2.81e-18 | 23 |
respiratory system epithelium | 2.81e-18 | 23 |
hemolymphoid system gland | 2.81e-18 | 23 |
pharyngeal epithelium | 2.81e-18 | 23 |
thymic region | 2.81e-18 | 23 |
pharyngeal gland | 2.81e-18 | 23 |
entire pharyngeal arch endoderm | 2.81e-18 | 23 |
thymus primordium | 2.81e-18 | 23 |
early pharyngeal endoderm | 2.81e-18 | 23 |
pharynx | 2.32e-17 | 24 |
gland of gut | 2.32e-17 | 24 |
upper respiratory tract | 2.32e-17 | 24 |
chordate pharynx | 2.32e-17 | 24 |
pharyngeal arch system | 2.32e-17 | 24 |
pharyngeal region of foregut | 2.32e-17 | 24 |
segment of respiratory tract | 5.05e-15 | 27 |
lateral plate mesoderm | 2.96e-11 | 87 |
craniocervical region | 2.29e-10 | 36 |
respiratory tract | 4.76e-10 | 41 |
respiratory system | 1.02e-09 | 42 |
anterior region of body | 4.09e-08 | 43 |
lymphoid system | 6.83e-08 | 3 |
connective tissue | 1.19e-07 | 46 |
foregut | 3.94e-07 | 80 |