FFCP PHASE1:Mm9::chr7:50664779..50664790,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1406|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:50664779..50664790,+|id=chr7:50664779..50664790,+|ontology_enrichment_celltype=CL:0000680!1.80e-14!6;CL:0000183!1.80e-14!6;CL:0000187!1.80e-14!6;CL:0000056!1.80e-14!6;CL:0000222!2.29e-12!7;CL:0000034!1.48e-11!97;CL:0000548!2.15e-11!115;CL:0000004!2.15e-11!115;CL:0000255!2.15e-11!115;CL:0000723!3.03e-11!91;CL:0000048!3.03e-11!91;CL:0000192!3.73e-11!3;CL:0000359!3.73e-11!3;CL:0002539!3.73e-11!3;CL:0000514!3.73e-11!3;CL:0002092!4.04e-11!3;CL:0002540!4.04e-11!3;CL:0002371!5.43e-11!118;CL:0000144!1.31e-10!121;CL:0000012!1.31e-10!121;CL:0000355!1.49e-09!9;CL:0000219!4.35e-08!54;CL:0000055!1.91e-07!50;CL:0002320!4.94e-07!46;CL:0000134!4.94e-07!46|ontology_enrichment_celltype_v019_2=CL:0000680,3.01e-18,6;CL:0000187,3.01e-18,6;CL:0000056,3.01e-18,6;CL:0000222,1.08e-15,7;CL:0000355,2.83e-12,9;CL:0000192,3.67e-10,3;CL:0000359,3.67e-10,3;CL:0002539,3.67e-10,3;CL:0000514,3.67e-10,3;CL:0002092,4.52e-10,3;CL:0002540,4.52e-10,3;CL:0002494,1.03e-09,3;CL:0000737,1.03e-09,3;CL:0000746,1.03e-09,3;CL:0000513,1.03e-09,3;CL:0000723,1.32e-09,91;CL:0000048,1.32e-09,91;CL:0000034,6.20e-09,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001135!3.73e-11!3;UBERON:0004237!3.73e-11!3;UBERON:0004695!3.73e-11!3;UBERON:0002111!3.73e-11!3;UBERON:0004178!3.73e-11!3;UBERON:0000013!8.08e-11!3;UBERON:0001134!1.49e-09!9;UBERON:0002036!1.49e-09!9;UBERON:0002385!1.49e-09!9;UBERON:0000486!1.49e-09!9;UBERON:0001015!1.49e-09!9;UBERON:0004290!1.49e-09!9;UBERON:0003082!1.49e-09!9;UBERON:0002204!5.33e-09!32;UBERON:0000383!1.44e-08!10;UBERON:0000947!1.80e-08!4;UBERON:0001637!1.80e-08!4;UBERON:0003509!1.80e-08!4;UBERON:0004573!1.80e-08!4;UBERON:0004571!1.80e-08!4;UBERON:0010191!1.80e-08!4;UBERON:0004572!1.80e-08!4;UBERON:0002329!9.23e-08!11;UBERON:0003077!9.23e-08!11;UBERON:0003059!9.23e-08!11;UBERON:0007282!9.23e-08!11;UBERON:0009618!9.23e-08!11;UBERON:0007285!9.23e-08!11;UBERON:0002384!4.94e-07!46;UBERON:0000055!7.50e-07!5;UBERON:0001981!7.50e-07!5;UBERON:0002049!7.50e-07!5;UBERON:0007500!7.50e-07!5;UBERON:0007798!7.50e-07!5;UBERON:0004537!7.50e-07!5;UBERON:0006965!7.50e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.83e-12,9;UBERON:0002036,2.83e-12,9;UBERON:0002385,2.83e-12,9;UBERON:0000486,2.83e-12,9;UBERON:0007503,2.83e-12,9;UBERON:0001015,2.83e-12,9;UBERON:0002329,2.83e-12,9;UBERON:0003082,2.83e-12,9;UBERON:0003059,2.83e-12,9;UBERON:0007282,2.83e-12,9;UBERON:0004290,2.83e-12,9;UBERON:0009618,2.83e-12,9;UBERON:0000383,4.48e-11,10;UBERON:0001135,3.67e-10,3;UBERON:0004237,3.67e-10,3;UBERON:0004695,3.67e-10,3;UBERON:0002111,3.67e-10,3;UBERON:0004178,3.67e-10,3;UBERON:0007524,4.30e-10,11;UBERON:0003077,4.30e-10,11;UBERON:0007285,4.30e-10,11;UBERON:0000013,1.26e-09,3;UBERON:0000947,7.72e-08,4;UBERON:0001637,7.72e-08,4;UBERON:0004573,7.72e-08,4;UBERON:0003509,7.72e-08,4;UBERON:0004571,7.72e-08,4;UBERON:0010191,7.72e-08,4;UBERON:0004572,7.72e-08,4;UBERON:0002204,2.37e-07,32|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0.595745707205312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,1.31790010585369,9.17733760808408,0,0,0.439372365468944,0,0.139986421625363,0,0.167782606057736,0,0,1.02903774414379,0,1.54701627683233,0,0,0,1.35537812827653,0,2.2497492932035,1.97773272513395,0.7104801149461,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38602451609281,4.41636207824877,3.18005617059306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29508923527346,0,0,0.390438744296638,0,0,0,0,0.809621403349789,1.16902343164525,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:50664779..50664790,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1406 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:50664779..50664790,+ | |||
|description=CAGE_peak_at_chr7:50664779..50664790,+ | |||
|id=chr7:50664779..50664790,+ | |||
|ontology_enrichment_celltype=CL:0000680!1.80e-14!6;CL:0000183!1.80e-14!6;CL:0000187!1.80e-14!6;CL:0000056!1.80e-14!6;CL:0000222!2.29e-12!7;CL:0000034!1.48e-11!97;CL:0000548!2.15e-11!115;CL:0000004!2.15e-11!115;CL:0000255!2.15e-11!115;CL:0000723!3.03e-11!91;CL:0000048!3.03e-11!91;CL:0000192!3.73e-11!3;CL:0000359!3.73e-11!3;CL:0002539!3.73e-11!3;CL:0000514!3.73e-11!3;CL:0002092!4.04e-11!3;CL:0002540!4.04e-11!3;CL:0002371!5.43e-11!118;CL:0000144!1.31e-10!121;CL:0000012!1.31e-10!121;CL:0000355!1.49e-09!9;CL:0000219!4.35e-08!54;CL:0000055!1.91e-07!50;CL:0002320!4.94e-07!46;CL:0000134!4.94e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.01e-18,6;CL:0000187,3.01e-18,6;CL:0000056,3.01e-18,6;CL:0000222,1.08e-15,7;CL:0000355,2.83e-12,9;CL:0000192,3.67e-10,3;CL:0000359,3.67e-10,3;CL:0002539,3.67e-10,3;CL:0000514,3.67e-10,3;CL:0002092,4.52e-10,3;CL:0002540,4.52e-10,3;CL:0002494,1.03e-09,3;CL:0000737,1.03e-09,3;CL:0000746,1.03e-09,3;CL:0000513,1.03e-09,3;CL:0000723,1.32e-09,91;CL:0000048,1.32e-09,91;CL:0000034,6.20e-09,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001135!3.73e-11!3;UBERON:0004237!3.73e-11!3;UBERON:0004695!3.73e-11!3;UBERON:0002111!3.73e-11!3;UBERON:0004178!3.73e-11!3;UBERON:0000013!8.08e-11!3;UBERON:0001134!1.49e-09!9;UBERON:0002036!1.49e-09!9;UBERON:0002385!1.49e-09!9;UBERON:0000486!1.49e-09!9;UBERON:0001015!1.49e-09!9;UBERON:0004290!1.49e-09!9;UBERON:0003082!1.49e-09!9;UBERON:0002204!5.33e-09!32;UBERON:0000383!1.44e-08!10;UBERON:0000947!1.80e-08!4;UBERON:0001637!1.80e-08!4;UBERON:0003509!1.80e-08!4;UBERON:0004573!1.80e-08!4;UBERON:0004571!1.80e-08!4;UBERON:0010191!1.80e-08!4;UBERON:0004572!1.80e-08!4;UBERON:0002329!9.23e-08!11;UBERON:0003077!9.23e-08!11;UBERON:0003059!9.23e-08!11;UBERON:0007282!9.23e-08!11;UBERON:0009618!9.23e-08!11;UBERON:0007285!9.23e-08!11;UBERON:0002384!4.94e-07!46;UBERON:0000055!7.50e-07!5;UBERON:0001981!7.50e-07!5;UBERON:0002049!7.50e-07!5;UBERON:0007500!7.50e-07!5;UBERON:0007798!7.50e-07!5;UBERON:0004537!7.50e-07!5;UBERON:0006965!7.50e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.83e-12,9;UBERON:0002036,2.83e-12,9;UBERON:0002385,2.83e-12,9;UBERON:0000486,2.83e-12,9;UBERON:0007503,2.83e-12,9;UBERON:0001015,2.83e-12,9;UBERON:0002329,2.83e-12,9;UBERON:0003082,2.83e-12,9;UBERON:0003059,2.83e-12,9;UBERON:0007282,2.83e-12,9;UBERON:0004290,2.83e-12,9;UBERON:0009618,2.83e-12,9;UBERON:0000383,4.48e-11,10;UBERON:0001135,3.67e-10,3;UBERON:0004237,3.67e-10,3;UBERON:0004695,3.67e-10,3;UBERON:0002111,3.67e-10,3;UBERON:0004178,3.67e-10,3;UBERON:0007524,4.30e-10,11;UBERON:0003077,4.30e-10,11;UBERON:0007285,4.30e-10,11;UBERON:0000013,1.26e-09,3;UBERON:0000947,7.72e-08,4;UBERON:0001637,7.72e-08,4;UBERON:0004573,7.72e-08,4;UBERON:0003509,7.72e-08,4;UBERON:0004571,7.72e-08,4;UBERON:0010191,7.72e-08,4;UBERON:0004572,7.72e-08,4;UBERON:0002204,2.37e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0.595745707205312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,1.31790010585369,9.17733760808408,0,0,0.439372365468944,0,0.139986421625363,0,0.167782606057736,0,0,1.02903774414379,0,1.54701627683233,0,0,0,1.35537812827653,0,2.2497492932035,1.97773272513395,0.7104801149461,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38602451609281,4.41636207824877,3.18005617059306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29508923527346,0,0,0.390438744296638,0,0,0,0,0.809621403349789,1.16902343164525,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:50664779..50664790,+ | |||
}} |
Latest revision as of 05:23, 5 August 2015
Short description: | p@chr7:50664779..50664790, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:50664779..50664790, + |
Coexpression cluster: | MCL_coexpression_mm9:1406 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.01e-18 | 6 |
muscle cell | 3.01e-18 | 6 |
myoblast | 3.01e-18 | 6 |
mesodermal cell | 1.08e-15 | 7 |
multi-potent skeletal muscle stem cell | 2.83e-12 | 9 |
smooth muscle cell | 3.67e-10 | 3 |
vascular associated smooth muscle cell | 3.67e-10 | 3 |
aortic smooth muscle cell | 3.67e-10 | 3 |
smooth muscle myoblast | 3.67e-10 | 3 |
bone marrow cell | 4.52e-10 | 3 |
mesenchymal stem cell of the bone marrow | 4.52e-10 | 3 |
cardiocyte | 1.03e-09 | 3 |
striated muscle cell | 1.03e-09 | 3 |
cardiac muscle cell | 1.03e-09 | 3 |
cardiac muscle myoblast | 1.03e-09 | 3 |
somatic stem cell | 1.32e-09 | 91 |
multi fate stem cell | 1.32e-09 | 91 |
stem cell | 6.20e-09 | 97 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.83e-12 | 9 |
striated muscle tissue | 2.83e-12 | 9 |
muscle tissue | 2.83e-12 | 9 |
multilaminar epithelium | 2.83e-12 | 9 |
epithelial vesicle | 2.83e-12 | 9 |
musculature | 2.83e-12 | 9 |
somite | 2.83e-12 | 9 |
myotome | 2.83e-12 | 9 |
presomitic mesoderm | 2.83e-12 | 9 |
presumptive segmental plate | 2.83e-12 | 9 |
dermomyotome | 2.83e-12 | 9 |
trunk paraxial mesoderm | 2.83e-12 | 9 |
musculature of body | 4.48e-11 | 10 |
smooth muscle tissue | 3.67e-10 | 3 |
blood vessel smooth muscle | 3.67e-10 | 3 |
arterial system smooth muscle | 3.67e-10 | 3 |
artery smooth muscle tissue | 3.67e-10 | 3 |
aorta smooth muscle tissue | 3.67e-10 | 3 |
dense mesenchyme tissue | 4.30e-10 | 11 |
paraxial mesoderm | 4.30e-10 | 11 |
presumptive paraxial mesoderm | 4.30e-10 | 11 |
sympathetic nervous system | 1.26e-09 | 3 |
aorta | 7.72e-08 | 4 |
artery | 7.72e-08 | 4 |
systemic artery | 7.72e-08 | 4 |
arterial blood vessel | 7.72e-08 | 4 |
systemic arterial system | 7.72e-08 | 4 |
aortic system | 7.72e-08 | 4 |
arterial system | 7.72e-08 | 4 |
musculoskeletal system | 2.37e-07 | 32 |