FFCP PHASE1:Mm9::chr6:36760099..36760126,-: Difference between revisions
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{{FFCP|EntrezGene=19242|HGNC=|MCL_coexpression_id=471|UniProt=Q3UZI5|association_with_transcript=33bp_to_ENSMUST00000166530_5end|description=CAGE_peak_3_at_Ptn_5end|id=chr6:36760099..36760126,-|ontology_enrichment_celltype=CL:0000540!1.07e-07!33;CL:0000047!1.07e-07!33;CL:0000031!1.07e-07!33;CL:0000404!1.07e-07!33;CL:0000117!1.37e-07!23;CL:0000337!1.37e-07!23|ontology_enrichment_celltype_v019_2=CL:0000540,8.26e-08,33;CL:0000047,8.26e-08,33;CL:0000031,8.26e-08,33;CL:0000404,8.26e-08,33;CL:0000117,1.06e-07,23;CL:0000337,1.06e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.65e-16!73;UBERON:0005743!1.65e-16!73;UBERON:0000073!1.84e-15!75;UBERON:0001016!1.84e-15!75;UBERON:0001049!6.59e-15!52;UBERON:0005068!6.59e-15!52;UBERON:0006241!6.59e-15!52;UBERON:0007135!6.59e-15!52;UBERON:0004121!2.41e-14!102;UBERON:0000924!2.41e-14!102;UBERON:0006601!2.41e-14!102;UBERON:0002346!4.56e-14!71;UBERON:0003075!4.56e-14!71;UBERON:0007284!4.56e-14!71;UBERON:0002020!3.44e-13!34;UBERON:0000033!4.20e-13!63;UBERON:0000955!7.71e-13!50;UBERON:0006238!7.71e-13!50;UBERON:0002616!3.06e-12!49;UBERON:0003080!3.87e-12!40;UBERON:0002780!7.08e-12!39;UBERON:0001890!7.08e-12!39;UBERON:0006240!7.08e-12!39;UBERON:0003056!8.76e-12!49;UBERON:0002791!2.98e-10!29;UBERON:0003528!2.98e-10!29;UBERON:0001893!2.98e-10!29;UBERON:0000468!3.79e-10!333;UBERON:0000153!8.15e-08!94;UBERON:0000922!1.58e-07!328;UBERON:0002021!3.50e-07!10;UBERON:0000411!3.50e-07!10;UBERON:0001950!3.50e-07!10;UBERON:0000956!6.22e-07!21;UBERON:0001869!6.22e-07!21;UBERON:0000203!6.22e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.64e-16,73;UBERON:0010314,3.05e-15,92;UBERON:0001016,3.51e-15,75;UBERON:0000073,7.69e-15,54;UBERON:0001049,1.23e-14,52;UBERON:0005068,1.23e-14,52;UBERON:0006241,1.23e-14,52;UBERON:0007135,1.23e-14,52;UBERON:0002346,4.50e-14,64;UBERON:0003075,4.50e-14,64;UBERON:0007284,4.50e-14,64;UBERON:0010371,9.55e-14,73;UBERON:0004121,1.03e-13,95;UBERON:0000924,1.03e-13,95;UBERON:0006601,1.03e-13,95;UBERON:0002020,4.16e-13,34;UBERON:0000955,2.98e-12,47;UBERON:0006238,2.98e-12,47;UBERON:0003080,4.53e-12,40;UBERON:0002780,8.37e-12,39;UBERON:0001890,8.37e-12,39;UBERON:0006240,8.37e-12,39;UBERON:0003056,9.80e-12,49;UBERON:0002616,1.19e-11,46;UBERON:0003528,3.89e-10,29;UBERON:0002791,3.89e-10,29;UBERON:0001893,3.89e-10,29;UBERON:0002021,2.76e-07,10;UBERON:0000411,2.76e-07,10;UBERON:0001950,2.76e-07,10;UBERON:0000956,8.84e-07,21;UBERON:0001869,8.84e-07,21;UBERON:0000203,8.84e-07,21|phase1_expression=325.422457316941,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37824676133023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0,2.34717403304412,0.872100625521786,1.09843091367236,0.972149495371417,9.65906309215001,11.5002051491977,0,0,0,1.80081605225163,19.4842739158355,7.73508138416164,30.7521020506589,26.4495489636016,20.2826049121977,2.37191172448392,2.66788438833342,0,0,0,8.68840320503374,14.6002956022191,21.8785081970888,24.7060867146994,22.7150958259493,47.989365379839,58.309294811226,20.7009450673272,18.0189485514284,11.9498442259303,13.2139057199266,24.6436562504412,22.4265538554115,41.2804080595507,48.3054758220723,56.2586440201301,26.5223849051312,26.449842671489,28.2676758387099,60.1042314366282,58.5147608084313,44.3630681064215,0.151452386666368,1.51143120213571,0.289864488701678,0,0,0,0,0,3.5111105032938,1.36344258062446,0.519572009205738,0.70667914902068,72.3935177652138,0,0,0,0.216491041011214,0,0,1.7127581957859,1.03575153458869,8.16431764856536,28.7985642431786,14.6143429589828,10.1470818792666,12.2085338847624,11.8764594207062,13.4463252722753,4.94389935468748,0.86759614151947,0,20.0590893934787,4.85851340612866,8.727754556434,1.86391761218122,22.2513405728776,17.5935233723302,0,0,0,0,25.314618059415,34.7700458142156,34.4292924789249,39.1104720432622,41.9373350021742,33.4538751740892,37.6399730317198,70.3710004205686,3.4833951770826,0.252722758433675,4.8401626853889,15.354212269599,15.8632452059096,17.8261508507296,19.7423311364787,17.4173437827399,19.4732854832972,18.1781345645874,15.78090561508,18.1077114063587,36.1192613120535,33.4307135911503,43.4007550206598,49.2143631129308,31.6909471535172,36.423438144206,31.2483798905034,0,0,0,24.2337153866537,36.8205914170321,34.7519778619759,35.0382208666111,27.1534639811417,30.8534225774757,16.2773761325285,15.0233104783787,11.6765342367169,17.9370236405694,8.70087559619205,5.26947262048062,2.77779976108131,1.75640092232841,0.402619256281115,28.5994330047213,39.4124665412659,0,1.05780226665418,32.2065258308203,32.280897388601,22.2940708087221,13.3111126251406,10.8965241483986,10.6526350623033,1.42358718463353,4.44687177754829,4.52403375840485,9.94782360205754,6.23885078781184,1.79763881730844,0.432276099749388,0.398282546508734,19.3461258972143,23.8779391354333,21.4144697778853,24.641810669283,25.9896332804618,23.2149563836954,8.91635173452028,1.18088118383682,1.8839847340965,0.616985819609003,0,7.17433954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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19242 | |||
|HGNC= | |||
|MCL_coexpression_id=471 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UZI5 | |||
|association_with_transcript=33bp_to_ENSMUST00000166530_5end | |||
|cluster_id=chr6:36760099..36760126,- | |||
|description=CAGE_peak_3_at_Ptn_5end | |||
|id=chr6:36760099..36760126,- | |||
|ontology_enrichment_celltype=CL:0000540!1.07e-07!33;CL:0000047!1.07e-07!33;CL:0000031!1.07e-07!33;CL:0000404!1.07e-07!33;CL:0000117!1.37e-07!23;CL:0000337!1.37e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.26e-08,33;CL:0000047,8.26e-08,33;CL:0000031,8.26e-08,33;CL:0000404,8.26e-08,33;CL:0000117,1.06e-07,23;CL:0000337,1.06e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.65e-16!73;UBERON:0005743!1.65e-16!73;UBERON:0000073!1.84e-15!75;UBERON:0001016!1.84e-15!75;UBERON:0001049!6.59e-15!52;UBERON:0005068!6.59e-15!52;UBERON:0006241!6.59e-15!52;UBERON:0007135!6.59e-15!52;UBERON:0004121!2.41e-14!102;UBERON:0000924!2.41e-14!102;UBERON:0006601!2.41e-14!102;UBERON:0002346!4.56e-14!71;UBERON:0003075!4.56e-14!71;UBERON:0007284!4.56e-14!71;UBERON:0002020!3.44e-13!34;UBERON:0000033!4.20e-13!63;UBERON:0000955!7.71e-13!50;UBERON:0006238!7.71e-13!50;UBERON:0002616!3.06e-12!49;UBERON:0003080!3.87e-12!40;UBERON:0002780!7.08e-12!39;UBERON:0001890!7.08e-12!39;UBERON:0006240!7.08e-12!39;UBERON:0003056!8.76e-12!49;UBERON:0002791!2.98e-10!29;UBERON:0003528!2.98e-10!29;UBERON:0001893!2.98e-10!29;UBERON:0000468!3.79e-10!333;UBERON:0000153!8.15e-08!94;UBERON:0000922!1.58e-07!328;UBERON:0002021!3.50e-07!10;UBERON:0000411!3.50e-07!10;UBERON:0001950!3.50e-07!10;UBERON:0000956!6.22e-07!21;UBERON:0001869!6.22e-07!21;UBERON:0000203!6.22e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.64e-16,73;UBERON:0010314,3.05e-15,92;UBERON:0001016,3.51e-15,75;UBERON:0000073,7.69e-15,54;UBERON:0001049,1.23e-14,52;UBERON:0005068,1.23e-14,52;UBERON:0006241,1.23e-14,52;UBERON:0007135,1.23e-14,52;UBERON:0002346,4.50e-14,64;UBERON:0003075,4.50e-14,64;UBERON:0007284,4.50e-14,64;UBERON:0010371,9.55e-14,73;UBERON:0004121,1.03e-13,95;UBERON:0000924,1.03e-13,95;UBERON:0006601,1.03e-13,95;UBERON:0002020,4.16e-13,34;UBERON:0000955,2.98e-12,47;UBERON:0006238,2.98e-12,47;UBERON:0003080,4.53e-12,40;UBERON:0002780,8.37e-12,39;UBERON:0001890,8.37e-12,39;UBERON:0006240,8.37e-12,39;UBERON:0003056,9.80e-12,49;UBERON:0002616,1.19e-11,46;UBERON:0003528,3.89e-10,29;UBERON:0002791,3.89e-10,29;UBERON:0001893,3.89e-10,29;UBERON:0002021,2.76e-07,10;UBERON:0000411,2.76e-07,10;UBERON:0001950,2.76e-07,10;UBERON:0000956,8.84e-07,21;UBERON:0001869,8.84e-07,21;UBERON:0000203,8.84e-07,21 | |||
|phase1_expression=325.422457316941,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37824676133023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0,2.34717403304412,0.872100625521786,1.09843091367236,0.972149495371417,9.65906309215001,11.5002051491977,0,0,0,1.80081605225163,19.4842739158355,7.73508138416164,30.7521020506589,26.4495489636016,20.2826049121977,2.37191172448392,2.66788438833342,0,0,0,8.68840320503374,14.6002956022191,21.8785081970888,24.7060867146994,22.7150958259493,47.989365379839,58.309294811226,20.7009450673272,18.0189485514284,11.9498442259303,13.2139057199266,24.6436562504412,22.4265538554115,41.2804080595507,48.3054758220723,56.2586440201301,26.5223849051312,26.449842671489,28.2676758387099,60.1042314366282,58.5147608084313,44.3630681064215,0.151452386666368,1.51143120213571,0.289864488701678,0,0,0,0,0,3.5111105032938,1.36344258062446,0.519572009205738,0.70667914902068,72.3935177652138,0,0,0,0.216491041011214,0,0,1.7127581957859,1.03575153458869,8.16431764856536,28.7985642431786,14.6143429589828,10.1470818792666,12.2085338847624,11.8764594207062,13.4463252722753,4.94389935468748,0.86759614151947,0,20.0590893934787,4.85851340612866,8.727754556434,1.86391761218122,22.2513405728776,17.5935233723302,0,0,0,0,25.314618059415,34.7700458142156,34.4292924789249,39.1104720432622,41.9373350021742,33.4538751740892,37.6399730317198,70.3710004205686,3.4833951770826,0.252722758433675,4.8401626853889,15.354212269599,15.8632452059096,17.8261508507296,19.7423311364787,17.4173437827399,19.4732854832972,18.1781345645874,15.78090561508,18.1077114063587,36.1192613120535,33.4307135911503,43.4007550206598,49.2143631129308,31.6909471535172,36.423438144206,31.2483798905034,0,0,0,24.2337153866537,36.8205914170321,34.7519778619759,35.0382208666111,27.1534639811417,30.8534225774757,16.2773761325285,15.0233104783787,11.6765342367169,17.9370236405694,8.70087559619205,5.26947262048062,2.77779976108131,1.75640092232841,0.402619256281115,28.5994330047213,39.4124665412659,0,1.05780226665418,32.2065258308203,32.280897388601,22.2940708087221,13.3111126251406,10.8965241483986,10.6526350623033,1.42358718463353,4.44687177754829,4.52403375840485,9.94782360205754,6.23885078781184,1.79763881730844,0.432276099749388,0.398282546508734,19.3461258972143,23.8779391354333,21.4144697778853,24.641810669283,25.9896332804618,23.2149563836954,8.91635173452028,1.18088118383682,1.8839847340965,0.616985819609003,0,7.17433954579204,7.86235980452812,2.47348323623339,1.82574109249653,0.72353147925725,2.29163266603278,0.575392274901621,0.648540907100142,0.549122826376163,2.87536413054709,1.86070473834252,0.312037673114561,0.252578877947112,0,0,0.369506380333209,52.2996296486538,23.6299215840938,15.1073126339917,8.44884893838608,3.51763140627813,4.76087281772027,1.95133647857799,3.31033802623001,3.5434350343804,1.75400245523236,0.81931657357869,0.518054945597687,0,0,0,0.491764273019036,1.65562047782839,24.0825884981688,34.1086007983311,104.098690314189,1.76729649043061,12.9358369960665,11.7131623288992,10.5557464889071,23.1799734013975,15.81870585985,17.8338214396964,18.6212922770451,14.028281179743,15.8115111178609,65.5495485500486,1.41940085208269,64.4597485275464,63.2001402291875,13.5275500837479,2.65490276679926,54.6256431348708,42.0229744181004,36.5893854726442,21.5570381802964,35.9699123094395,20.1574068671212,29.0826983582004,22.8158322166222,5.05658812697306,2.10837217149998,2.06271086496374,16.6815406819356,16.5656206508805,10.3486947026204,22.7197257133488,28.551777616406,34.0684441619955,40.4790590681218,8.22055362609418,7.27482294997502,0.42366414172764,1.32317038832977,13.1909002353184,10.9795810153216,17.3098094543807,10.0272768962635,7.71462228801788,2.33184669303881,20.9530591271876,0.170870880797853,54.692520010254,23.3345104485837,0.753473828018764,0.410082683163076,0,0.679913719975421,0.279902904647316,0.276399947608848,3.81868247206045,30.368255383789,29.4813227333931,19.3329560071024,19.0270349373167,12.2283035697859,10.2496903252464,11.2408699786457,2.87931536182433,1.16653475962614,0.621339313086926,0,20.1847337159371,21.6750622498798,33.6400555835202,29.9650790468336,33.6222689726649,33.9162419686229,11.4579858662676,5.45268591013696,2.89900944991207,1.44015003128933,0.316011120628178,44.396822148546,32.8675062927447,14.9408946424464,10.9206284357164,4.37098980518783,3.4856680360791,1.62458479892035,2.62512769865184,1.5241361331,1.51239277705261,0.292373642219257,0.577271049841977,0.467507608726276,2.94749498699775,0,0,0,2.70465431645067,13.3254557570339,8.79127796482872,1.71494703263253,1.00314420807073,94.3135577170501,75.0330135506698,85.9343270159095,53.7900460735742,46.5856113444037,59.6761178937863,58.0519350199353,29.2708782095743,39.87653199061,39.3497836931383,12.7658437528537,44.2917609475144,37.9028604774178,25.7693120092392,15.5113740344707,14.3397936591011,28.6698278864084,27.4026626127729,22.7852638810189,26.7859044469625,25.0944506891337,24.8986770629621,27.343320181205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| |||
|short_description=p3@Ptn | |||
}} |
Revision as of 15:25, 5 August 2015
Short description: | p3@Ptn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ptn_5end |
Coexpression cluster: | MCL_coexpression_mm9:471 |
Association with transcript: | 33bp_to_ENSMUST00000166530_5end |
EntrezGene: | 19242 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.26e-08 | 33 |
neuronal stem cell | 8.26e-08 | 33 |
neuroblast | 8.26e-08 | 33 |
electrically signaling cell | 8.26e-08 | 33 |
CNS neuron (sensu Vertebrata) | 1.06e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.64e-16 | 73 |
structure with developmental contribution from neural crest | 3.05e-15 | 92 |
nervous system | 3.51e-15 | 75 |
regional part of nervous system | 7.69e-15 | 54 |
neural tube | 1.23e-14 | 52 |
neural rod | 1.23e-14 | 52 |
future spinal cord | 1.23e-14 | 52 |
neural keel | 1.23e-14 | 52 |
neurectoderm | 4.50e-14 | 64 |
neural plate | 4.50e-14 | 64 |
presumptive neural plate | 4.50e-14 | 64 |
ecto-epithelium | 9.55e-14 | 73 |
ectoderm-derived structure | 1.03e-13 | 95 |
ectoderm | 1.03e-13 | 95 |
presumptive ectoderm | 1.03e-13 | 95 |
gray matter | 4.16e-13 | 34 |
brain | 2.98e-12 | 47 |
future brain | 2.98e-12 | 47 |
anterior neural tube | 4.53e-12 | 40 |
regional part of forebrain | 8.37e-12 | 39 |
forebrain | 8.37e-12 | 39 |
future forebrain | 8.37e-12 | 39 |
pre-chordal neural plate | 9.80e-12 | 49 |
regional part of brain | 1.19e-11 | 46 |
brain grey matter | 3.89e-10 | 29 |
regional part of telencephalon | 3.89e-10 | 29 |
telencephalon | 3.89e-10 | 29 |
occipital lobe | 2.76e-07 | 10 |
visual cortex | 2.76e-07 | 10 |
neocortex | 2.76e-07 | 10 |
cerebral cortex | 8.84e-07 | 21 |
cerebral hemisphere | 8.84e-07 | 21 |
pallium | 8.84e-07 | 21 |