FFCP PHASE1:Mm9::chr11:42233939..42233945,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=22|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:42233939..42233945,+|id=chr11:42233939..42233945,+|ontology_enrichment_celltype=CL:0000540!2.28e-13!33;CL:0000047!2.28e-13!33;CL:0000031!2.28e-13!33;CL:0000404!2.28e-13!33;CL:0000117!5.00e-12!23;CL:0000337!5.00e-12!23;CL:0000221!1.62e-09!44;CL:0000133!1.62e-09!44;CL:0000393!1.67e-09!39;CL:0000211!1.67e-09!39;CL:0002319!1.74e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,8.15e-17,23;CL:0000337,8.15e-17,23;CL:0000540,2.64e-14,33;CL:0000047,2.64e-14,33;CL:0000031,2.64e-14,33;CL:0000404,2.64e-14,33;CL:0000393,1.74e-11,39;CL:0000211,1.74e-11,39;CL:0002319,4.72e-10,43;CL:0000221,9.80e-10,44;CL:0000133,9.80e-10,44;CL:0000120,2.27e-08,3;CL:0002613,5.00e-08,3;CL:0002610,1.39e-07,3;CL:0002612,3.57e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.02e-19!73;UBERON:0005743!1.02e-19!73;UBERON:0000073!1.45e-18!75;UBERON:0001016!1.45e-18!75;UBERON:0004121!3.32e-17!102;UBERON:0000924!3.32e-17!102;UBERON:0006601!3.32e-17!102;UBERON:0000033!7.70e-17!63;UBERON:0002346!2.37e-15!71;UBERON:0003075!2.37e-15!71;UBERON:0007284!2.37e-15!71;UBERON:0003056!6.75e-15!49;UBERON:0001049!2.34e-13!52;UBERON:0005068!2.34e-13!52;UBERON:0006241!2.34e-13!52;UBERON:0007135!2.34e-13!52;UBERON:0000955!8.67e-13!50;UBERON:0006238!8.67e-13!50;UBERON:0002616!3.91e-12!49;UBERON:0002020!5.49e-11!34;UBERON:0003080!4.21e-10!40;UBERON:0002780!1.39e-09!39;UBERON:0001890!1.39e-09!39;UBERON:0006240!1.39e-09!39;UBERON:0002791!4.51e-08!29;UBERON:0003528!4.51e-08!29;UBERON:0001893!4.51e-08!29;UBERON:0007811!1.64e-07!86;UBERON:0000153!6.22e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.38e-21,95;UBERON:0000924,7.38e-21,95;UBERON:0006601,7.38e-21,95;UBERON:0001017,9.46e-19,73;UBERON:0001016,4.62e-18,75;UBERON:0002346,2.15e-16,64;UBERON:0003075,2.15e-16,64;UBERON:0007284,2.15e-16,64;UBERON:0000073,1.38e-15,54;UBERON:0010371,1.34e-13,73;UBERON:0003056,1.25e-12,49;UBERON:0001049,1.43e-11,52;UBERON:0005068,1.43e-11,52;UBERON:0006241,1.43e-11,52;UBERON:0007135,1.43e-11,52;UBERON:0010314,1.80e-11,92;UBERON:0002020,2.93e-09,34;UBERON:0000955,3.71e-09,47;UBERON:0006238,3.71e-09,47;UBERON:0002616,3.81e-08,46;UBERON:0000369,4.48e-08,5;UBERON:0002435,4.48e-08,5;UBERON:0000204,4.48e-08,5;UBERON:0010082,4.48e-08,5;UBERON:0000970,4.66e-08,9;UBERON:0000019,4.66e-08,9;UBERON:0000047,4.66e-08,9;UBERON:0010312,4.66e-08,9;UBERON:0004088,4.66e-08,9;UBERON:0002104,4.66e-08,9;UBERON:0001456,4.66e-08,9;UBERON:0003072,4.66e-08,9;UBERON:0004128,4.66e-08,9;UBERON:0003071,4.66e-08,9;UBERON:0004684,1.39e-07,3;UBERON:0002275,1.39e-07,3;UBERON:0002420,2.51e-07,8;UBERON:0007245,2.51e-07,8;UBERON:0010009,2.51e-07,8;UBERON:0010011,2.51e-07,8;UBERON:0000454,2.51e-07,8;UBERON:0003080,2.78e-07,40;UBERON:0002257,3.57e-07,3;UBERON:0001948,6.29e-07,5;UBERON:0002315,6.29e-07,5|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,3.43937983461316,4.7609188134483,5.70448263155561,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0.270011876663381,0.210324961351382,1.14260393761521,0.883474163806454,0.979926393719632,0.479227355091182,0,3.30347642998166,1.40456071893706,3.07213066512487,3.16527090552465,2.19570344645783,4.16730696445408,0.558365998002762,0,1.83357897332172,1.17851434189467,1.99320353118744,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,1.46390398505774,1.8850203613211,0,0,0,0,1.04853447583376,0.915001205637253,2.38743269014442,1.04294592115366,1.79000820131231,2.0778804455956,1.62241263067758,0.611036183101898,0,0,0.210441855886474,1.17108398666433,0.689706313300419,0.720248519221397,1.9591626318643,1.7009124787832,1.7935920839879,1.78033276663485,1.81092359517311,0.215567992932842,0.756424320671277,0,0.43839146485515,0,0,0,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,1.08037236876609,0.710234206755631,1.18058539048442,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0,0,0,0,0,0,1.26173969138476,0.617427674275707,0,0,0.213288250535234,0.464473343720877,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.469380496577004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.937693492737625,0,0,0.631016438832513,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0.809621403349789,2.33804686329049,1.58115111178609,1.92792789853084,0.851640511249612,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0.540183282093931,0.129358683782755,0,0.886701168211368,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0.370850604021019,0,0,0.370389054739423,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.418176592028937,0.436725127492355,0.269728692769641,0,0,0,0,0,0.598066184175915,0.330916980914195,0.777804753376191,0.258319646955462,1.18269287843545,0.821500670520278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0.564751842617067,0.920650473014354,0,0.343706364687375,1.37016503954128,0,1.35004500046361,0.900642406448441,1.35942722695261,0,0.103787347584177,3.19219898720825,1.53660245178721,0,0.628839487883947,0,0.44449345560323,0.206035057238894,0.962757628775446,0.505394423527595,1.01391719956096,0.377252682772152,0.280924522409647,0.832326981263301,0.804096565378586,1.42888107384922,0.231768651889711,0.77163688185482,0,0.441596760403192,0.685738504770831,0.177475806159338,0,0.290692833264657,0.376437521661322,0.676916863133412,0.365855945745545,0.789209134313529,0.679020569229309,0.561142271657738,0.237270036248348,0.29551344712669,0.818462086339379,0.154936841185966,0.578719832943424,0.499621155875892,0.701794825336225,0.214871054048298,0.191288332068843,0,0|short_description=p@chr11:42233939..42233945,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:42233939..42233945,+ | |||
|description=CAGE_peak_at_chr11:42233939..42233945,+ | |||
|id=chr11:42233939..42233945,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.28e-13!33;CL:0000047!2.28e-13!33;CL:0000031!2.28e-13!33;CL:0000404!2.28e-13!33;CL:0000117!5.00e-12!23;CL:0000337!5.00e-12!23;CL:0000221!1.62e-09!44;CL:0000133!1.62e-09!44;CL:0000393!1.67e-09!39;CL:0000211!1.67e-09!39;CL:0002319!1.74e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.15e-17,23;CL:0000337,8.15e-17,23;CL:0000540,2.64e-14,33;CL:0000047,2.64e-14,33;CL:0000031,2.64e-14,33;CL:0000404,2.64e-14,33;CL:0000393,1.74e-11,39;CL:0000211,1.74e-11,39;CL:0002319,4.72e-10,43;CL:0000221,9.80e-10,44;CL:0000133,9.80e-10,44;CL:0000120,2.27e-08,3;CL:0002613,5.00e-08,3;CL:0002610,1.39e-07,3;CL:0002612,3.57e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.02e-19!73;UBERON:0005743!1.02e-19!73;UBERON:0000073!1.45e-18!75;UBERON:0001016!1.45e-18!75;UBERON:0004121!3.32e-17!102;UBERON:0000924!3.32e-17!102;UBERON:0006601!3.32e-17!102;UBERON:0000033!7.70e-17!63;UBERON:0002346!2.37e-15!71;UBERON:0003075!2.37e-15!71;UBERON:0007284!2.37e-15!71;UBERON:0003056!6.75e-15!49;UBERON:0001049!2.34e-13!52;UBERON:0005068!2.34e-13!52;UBERON:0006241!2.34e-13!52;UBERON:0007135!2.34e-13!52;UBERON:0000955!8.67e-13!50;UBERON:0006238!8.67e-13!50;UBERON:0002616!3.91e-12!49;UBERON:0002020!5.49e-11!34;UBERON:0003080!4.21e-10!40;UBERON:0002780!1.39e-09!39;UBERON:0001890!1.39e-09!39;UBERON:0006240!1.39e-09!39;UBERON:0002791!4.51e-08!29;UBERON:0003528!4.51e-08!29;UBERON:0001893!4.51e-08!29;UBERON:0007811!1.64e-07!86;UBERON:0000153!6.22e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.38e-21,95;UBERON:0000924,7.38e-21,95;UBERON:0006601,7.38e-21,95;UBERON:0001017,9.46e-19,73;UBERON:0001016,4.62e-18,75;UBERON:0002346,2.15e-16,64;UBERON:0003075,2.15e-16,64;UBERON:0007284,2.15e-16,64;UBERON:0000073,1.38e-15,54;UBERON:0010371,1.34e-13,73;UBERON:0003056,1.25e-12,49;UBERON:0001049,1.43e-11,52;UBERON:0005068,1.43e-11,52;UBERON:0006241,1.43e-11,52;UBERON:0007135,1.43e-11,52;UBERON:0010314,1.80e-11,92;UBERON:0002020,2.93e-09,34;UBERON:0000955,3.71e-09,47;UBERON:0006238,3.71e-09,47;UBERON:0002616,3.81e-08,46;UBERON:0000369,4.48e-08,5;UBERON:0002435,4.48e-08,5;UBERON:0000204,4.48e-08,5;UBERON:0010082,4.48e-08,5;UBERON:0000970,4.66e-08,9;UBERON:0000019,4.66e-08,9;UBERON:0000047,4.66e-08,9;UBERON:0010312,4.66e-08,9;UBERON:0004088,4.66e-08,9;UBERON:0002104,4.66e-08,9;UBERON:0001456,4.66e-08,9;UBERON:0003072,4.66e-08,9;UBERON:0004128,4.66e-08,9;UBERON:0003071,4.66e-08,9;UBERON:0004684,1.39e-07,3;UBERON:0002275,1.39e-07,3;UBERON:0002420,2.51e-07,8;UBERON:0007245,2.51e-07,8;UBERON:0010009,2.51e-07,8;UBERON:0010011,2.51e-07,8;UBERON:0000454,2.51e-07,8;UBERON:0003080,2.78e-07,40;UBERON:0002257,3.57e-07,3;UBERON:0001948,6.29e-07,5;UBERON:0002315,6.29e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,3.43937983461316,4.7609188134483,5.70448263155561,0,0,0,0,0,0.299600110518405,0,0.518448061542388,0.270011876663381,0.210324961351382,1.14260393761521,0.883474163806454,0.979926393719632,0.479227355091182,0,3.30347642998166,1.40456071893706,3.07213066512487,3.16527090552465,2.19570344645783,4.16730696445408,0.558365998002762,0,1.83357897332172,1.17851434189467,1.99320353118744,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,1.46390398505774,1.8850203613211,0,0,0,0,1.04853447583376,0.915001205637253,2.38743269014442,1.04294592115366,1.79000820131231,2.0778804455956,1.62241263067758,0.611036183101898,0,0,0.210441855886474,1.17108398666433,0.689706313300419,0.720248519221397,1.9591626318643,1.7009124787832,1.7935920839879,1.78033276663485,1.81092359517311,0.215567992932842,0.756424320671277,0,0.43839146485515,0,0,0,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,1.08037236876609,0.710234206755631,1.18058539048442,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0,0,0,0,0,0,1.26173969138476,0.617427674275707,0,0,0.213288250535234,0.464473343720877,0,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.469380496577004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.937693492737625,0,0,0.631016438832513,0,0.430846795465598,0,0.222798674082394,0.283076530788832,0.809621403349789,2.33804686329049,1.58115111178609,1.92792789853084,0.851640511249612,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0.540183282093931,0.129358683782755,0,0.886701168211368,0.178368817602071,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0.370850604021019,0,0,0.370389054739423,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.418176592028937,0.436725127492355,0.269728692769641,0,0,0,0,0,0.598066184175915,0.330916980914195,0.777804753376191,0.258319646955462,1.18269287843545,0.821500670520278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0.564751842617067,0.920650473014354,0,0.343706364687375,1.37016503954128,0,1.35004500046361,0.900642406448441,1.35942722695261,0,0.103787347584177,3.19219898720825,1.53660245178721,0,0.628839487883947,0,0.44449345560323,0.206035057238894,0.962757628775446,0.505394423527595,1.01391719956096,0.377252682772152,0.280924522409647,0.832326981263301,0.804096565378586,1.42888107384922,0.231768651889711,0.77163688185482,0,0.441596760403192,0.685738504770831,0.177475806159338,0,0.290692833264657,0.376437521661322,0.676916863133412,0.365855945745545,0.789209134313529,0.679020569229309,0.561142271657738,0.237270036248348,0.29551344712669,0.818462086339379,0.154936841185966,0.578719832943424,0.499621155875892,0.701794825336225,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr11:42233939..42233945,+ | |||
}} |
Latest revision as of 21:59, 5 August 2015
Short description: | p@chr11:42233939..42233945, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:42233939..42233945, + |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.15e-17 | 23 |
neuroblast (sensu Vertebrata) | 8.15e-17 | 23 |
neuron | 2.64e-14 | 33 |
neuronal stem cell | 2.64e-14 | 33 |
neuroblast | 2.64e-14 | 33 |
electrically signaling cell | 2.64e-14 | 33 |
electrically responsive cell | 1.74e-11 | 39 |
electrically active cell | 1.74e-11 | 39 |
neural cell | 4.72e-10 | 43 |
ectodermal cell | 9.80e-10 | 44 |
neurectodermal cell | 9.80e-10 | 44 |
granule cell | 2.27e-08 | 3 |
striatum neuron | 5.00e-08 | 3 |
raphe nuclei neuron | 1.39e-07 | 3 |
neuron of the ventral spinal cord | 3.57e-07 | 3 |