FFCP PHASE1:Mm9::chr8:125897678..125897746,+: Difference between revisions
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{{FFCP|EntrezGene=66855|HGNC=|MCL_coexpression_id=1631|UniProt=Q8R3L2,B2ZAC8|association_with_transcript=0bp_to_ENSMUST00000057934,ENSMUST00000093050,ENSMUST00000108839,ENSMUST00000108840,NM_001037877,NM_001037878_5end|description=CAGE_peak_1_at_Tcf25_5end|id=chr8:125897678..125897746,+|ontology_enrichment_celltype=CL:0000117!3.59e-08!23;CL:0000337!3.59e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.59e-08,23;CL:0000337,3.59e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.97e-17!52;UBERON:0005068!1.97e-17!52;UBERON:0006241!1.97e-17!52;UBERON:0007135!1.97e-17!52;UBERON:0001017!3.82e-17!73;UBERON:0005743!3.82e-17!73;UBERON:0000073!8.39e-17!75;UBERON:0001016!8.39e-17!75;UBERON:0000955!1.71e-16!50;UBERON:0006238!1.71e-16!50;UBERON:0002616!5.34e-16!49;UBERON:0004121!1.14e-15!102;UBERON:0000924!1.14e-15!102;UBERON:0006601!1.14e-15!102;UBERON:0002020!8.18e-14!34;UBERON:0000033!1.33e-13!63;UBERON:0003080!2.58e-12!40;UBERON:0002346!8.05e-12!71;UBERON:0003075!8.05e-12!71;UBERON:0007284!8.05e-12!71;UBERON:0002780!1.11e-11!39;UBERON:0001890!1.11e-11!39;UBERON:0006240!1.11e-11!39;UBERON:0002791!2.84e-11!29;UBERON:0003528!2.84e-11!29;UBERON:0001893!2.84e-11!29;UBERON:0003056!1.03e-09!49;UBERON:0002619!5.81e-08!17;UBERON:0007023!6.34e-08!51;UBERON:0002021!1.08e-07!10;UBERON:0000411!1.08e-07!10;UBERON:0001950!1.08e-07!10;UBERON:0000956!1.15e-07!21;UBERON:0001869!1.15e-07!21;UBERON:0000203!1.15e-07!21;UBERON:0007811!3.37e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.14e-18,54;UBERON:0001049,1.97e-17,52;UBERON:0005068,1.97e-17,52;UBERON:0006241,1.97e-17,52;UBERON:0007135,1.97e-17,52;UBERON:0001017,3.82e-17,73;UBERON:0001016,8.39e-17,75;UBERON:0004121,1.48e-16,95;UBERON:0000924,1.48e-16,95;UBERON:0006601,1.48e-16,95;UBERON:0000955,1.10e-14,47;UBERON:0006238,1.10e-14,47;UBERON:0002616,3.34e-14,46;UBERON:0002020,8.18e-14,34;UBERON:0010371,2.23e-13,73;UBERON:0002346,6.70e-13,64;UBERON:0003075,6.70e-13,64;UBERON:0007284,6.70e-13,64;UBERON:0003080,2.58e-12,40;UBERON:0002780,1.11e-11,39;UBERON:0001890,1.11e-11,39;UBERON:0006240,1.11e-11,39;UBERON:0003528,2.84e-11,29;UBERON:0002791,2.84e-11,29;UBERON:0001893,2.84e-11,29;UBERON:0003056,1.03e-09,49;UBERON:0010314,1.18e-08,92;UBERON:0002619,5.81e-08,17;UBERON:0007023,6.34e-08,51;UBERON:0002021,1.08e-07,10;UBERON:0000411,1.08e-07,10;UBERON:0001950,1.08e-07,10;UBERON:0000956,1.15e-07,21;UBERON:0001869,1.15e-07,21;UBERON:0000203,1.15e-07,21|phase1_expression=172.480308331863,265.570285213554,280.279531463954,385.036940993595,413.238977205736,182.316889296312,205.345511083467,201.561507892301,180.209564354133,190.060395373459,101.361037189499,102.906085103984,209.036091246002,205.875047696739,122.91750210998,146.997044125014,90.2434822785309,190.223685711017,213.487173124135,182.063160621355,192.623052192173,146.255571118904,154.107875591972,208.310134477016,194.997888907095,192.367707978532,214.519474087219,191.984868323127,208.265667724186,168.356126679634,158.759045629198,122.560919977709,105.176078676961,79.2408405077194,123.339641633794,98.7433793429445,113.109823369352,192.106018508241,140.640362014284,150.774838264454,205.292789322824,216.525418731827,157.305354382094,183.431663790416,162.91272846976,149.774149763932,188.556313987877,191.862137614793,216.17120381072,227.482981916912,210.539578124545,195.503487536361,219.459648723519,227.763712591562,201.992373284621,247.740836902617,253.868627785738,198.018083434538,295.988982237592,375.583595283143,323.887847191658,230.753126339079,244.556068930563,224.075029603068,237.327927016074,203.907792989531,214.513679131178,210.551631316212,165.48862124433,199.808788730902,191.395714829758,513.314818973635,532.293183693389,184.716125216151,207.505444754482,190.278288828274,640.874427416442,607.536354609323,631.015638616648,310.196548741416,325.970474155386,265.665818983948,598.568349858961,483.975844627245,463.131489011511,454.611907385869,415.86767961418,336.823798606318,154.329982013029,208.879792135155,215.659179594048,154.87629785665,171.352776094353,175.943240473928,171.540974206185,157.257437371165,181.17330196996,196.165301287344,202.113511581032,197.51682215128,174.927527362637,252.803160506206,779.704033502336,647.070699869531,145.914961641558,127.69337219945,130.425306813814,181.209817114148,138.790705634884,215.68642806119,139.308717393207,218.301747949805,173.653469433812,168.96008005949,204.251584294719,141.249248654555,248.430942573046,197.667320909519,91.9994974027869,171.796394644149,132.063228039315,149.826453218784,270.268053766277,444.73403066054,402.766017202274,234.254119626278,132.395712579042,96.5843396899386,112.457150959662,730.82852965613,494.558151646935,279.957896507462,592.740931855663,654.887286222977,634.376900040337,541.074612330972,175.469223914095,178.150781913653,235.537610860185,276.31015677894,138.187910426391,124.377038498509,156.654052930654,166.679528526301,172.67663484607,182.049596524772,154.795248972672,295.956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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66855 | |||
|HGNC= | |||
|MCL_coexpression_id=1631 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R3L2,uniprot:B2ZAC8 | |||
|association_with_transcript=0bp_to_ENSMUST00000057934,ENSMUST00000093050,ENSMUST00000108839,ENSMUST00000108840,NM_001037877,NM_001037878_5end | |||
|cluster_id=chr8:125897678..125897746,+ | |||
|description=CAGE_peak_1_at_Tcf25_5end | |||
|id=chr8:125897678..125897746,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.59e-08!23;CL:0000337!3.59e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.59e-08,23;CL:0000337,3.59e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.97e-17!52;UBERON:0005068!1.97e-17!52;UBERON:0006241!1.97e-17!52;UBERON:0007135!1.97e-17!52;UBERON:0001017!3.82e-17!73;UBERON:0005743!3.82e-17!73;UBERON:0000073!8.39e-17!75;UBERON:0001016!8.39e-17!75;UBERON:0000955!1.71e-16!50;UBERON:0006238!1.71e-16!50;UBERON:0002616!5.34e-16!49;UBERON:0004121!1.14e-15!102;UBERON:0000924!1.14e-15!102;UBERON:0006601!1.14e-15!102;UBERON:0002020!8.18e-14!34;UBERON:0000033!1.33e-13!63;UBERON:0003080!2.58e-12!40;UBERON:0002346!8.05e-12!71;UBERON:0003075!8.05e-12!71;UBERON:0007284!8.05e-12!71;UBERON:0002780!1.11e-11!39;UBERON:0001890!1.11e-11!39;UBERON:0006240!1.11e-11!39;UBERON:0002791!2.84e-11!29;UBERON:0003528!2.84e-11!29;UBERON:0001893!2.84e-11!29;UBERON:0003056!1.03e-09!49;UBERON:0002619!5.81e-08!17;UBERON:0007023!6.34e-08!51;UBERON:0002021!1.08e-07!10;UBERON:0000411!1.08e-07!10;UBERON:0001950!1.08e-07!10;UBERON:0000956!1.15e-07!21;UBERON:0001869!1.15e-07!21;UBERON:0000203!1.15e-07!21;UBERON:0007811!3.37e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.14e-18,54;UBERON:0001049,1.97e-17,52;UBERON:0005068,1.97e-17,52;UBERON:0006241,1.97e-17,52;UBERON:0007135,1.97e-17,52;UBERON:0001017,3.82e-17,73;UBERON:0001016,8.39e-17,75;UBERON:0004121,1.48e-16,95;UBERON:0000924,1.48e-16,95;UBERON:0006601,1.48e-16,95;UBERON:0000955,1.10e-14,47;UBERON:0006238,1.10e-14,47;UBERON:0002616,3.34e-14,46;UBERON:0002020,8.18e-14,34;UBERON:0010371,2.23e-13,73;UBERON:0002346,6.70e-13,64;UBERON:0003075,6.70e-13,64;UBERON:0007284,6.70e-13,64;UBERON:0003080,2.58e-12,40;UBERON:0002780,1.11e-11,39;UBERON:0001890,1.11e-11,39;UBERON:0006240,1.11e-11,39;UBERON:0003528,2.84e-11,29;UBERON:0002791,2.84e-11,29;UBERON:0001893,2.84e-11,29;UBERON:0003056,1.03e-09,49;UBERON:0010314,1.18e-08,92;UBERON:0002619,5.81e-08,17;UBERON:0007023,6.34e-08,51;UBERON:0002021,1.08e-07,10;UBERON:0000411,1.08e-07,10;UBERON:0001950,1.08e-07,10;UBERON:0000956,1.15e-07,21;UBERON:0001869,1.15e-07,21;UBERON:0000203,1.15e-07,21 | |||
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| |||
|short_description=p1@Tcf25 | |||
}} |
Revision as of 02:34, 6 August 2015
Short description: | p1@Tcf25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tcf25_5end |
Coexpression cluster: | MCL_coexpression_mm9:1631 |
Association with transcript: | 0bp_to_ENSMUST00000057934, ENSMUST00000093050, ENSMUST00000108839, ENSMUST00000108840, NM_001037877, NM_001037878_5end |
EntrezGene: | 66855 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.59e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.59e-08 | 23 |