FFCP PHASE1:Mm9::chr13:52626058..52626176,-: Difference between revisions
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{{FFCP|EntrezGene=68203|HGNC=|MCL_coexpression_id=39|UniProt=Q5PR73,Q3UWU7|association_with_transcript=28bp_to_ENSMUST00000057442,NM_001024474,uc007qmv.1_5end|description=CAGE_peak_1_at_Diras2_5end|id=chr13:52626058..52626176,-|ontology_enrichment_celltype=CL:0000117!7.15e-10!23;CL:0000337!7.15e-10!23;CL:0000540!2.27e-07!33;CL:0000047!2.27e-07!33;CL:0000031!2.27e-07!33;CL:0000404!2.27e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.07e-11,23;CL:0000337,6.07e-11,23;CL:0000540,3.62e-08,33;CL:0000047,3.62e-08,33;CL:0000031,3.62e-08,33;CL:0000404,3.62e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.16e-25!71;UBERON:0003075!1.16e-25!71;UBERON:0007284!1.16e-25!71;UBERON:0000033!2.03e-20!63;UBERON:0004121!3.31e-20!102;UBERON:0000924!3.31e-20!102;UBERON:0006601!3.31e-20!102;UBERON:0001049!3.51e-19!52;UBERON:0005068!3.51e-19!52;UBERON:0006241!3.51e-19!52;UBERON:0007135!3.51e-19!52;UBERON:0001017!6.17e-19!73;UBERON:0005743!6.17e-19!73;UBERON:0003056!7.08e-19!49;UBERON:0007811!1.53e-18!86;UBERON:0000955!2.02e-18!50;UBERON:0006238!2.02e-18!50;UBERON:0000073!3.46e-18!75;UBERON:0001016!3.46e-18!75;UBERON:0002616!8.14e-18!49;UBERON:0000153!4.28e-16!94;UBERON:0003080!7.52e-15!40;UBERON:0002780!2.93e-14!39;UBERON:0001890!2.93e-14!39;UBERON:0006240!2.93e-14!39;UBERON:0002020!5.78e-14!34;UBERON:0002791!1.66e-11!29;UBERON:0003528!1.66e-11!29;UBERON:0001893!1.66e-11!29;UBERON:0002021!7.70e-08!10;UBERON:0000411!7.70e-08!10;UBERON:0001950!7.70e-08!10;UBERON:0000956!1.86e-07!21;UBERON:0001869!1.86e-07!21;UBERON:0000203!1.86e-07!21;UBERON:0002619!6.08e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.13e-27,64;UBERON:0003075,7.13e-27,64;UBERON:0007284,7.13e-27,64;UBERON:0000073,2.61e-23,54;UBERON:0001049,7.53e-22,52;UBERON:0005068,7.53e-22,52;UBERON:0006241,7.53e-22,52;UBERON:0007135,7.53e-22,52;UBERON:0003056,9.72e-22,49;UBERON:0010371,3.91e-21,73;UBERON:0001017,5.18e-21,73;UBERON:0010314,8.67e-21,92;UBERON:0001016,1.13e-19,75;UBERON:0004121,1.83e-19,95;UBERON:0000924,1.83e-19,95;UBERON:0006601,1.83e-19,95;UBERON:0000955,6.68e-19,47;UBERON:0006238,6.68e-19,47;UBERON:0002616,3.13e-18,46;UBERON:0003080,3.64e-17,40;UBERON:0002780,1.72e-16,39;UBERON:0001890,1.72e-16,39;UBERON:0006240,1.72e-16,39;UBERON:0002020,3.45e-16,34;UBERON:0003528,2.15e-13,29;UBERON:0002791,2.15e-13,29;UBERON:0001893,2.15e-13,29;UBERON:0000956,9.06e-09,21;UBERON:0001869,9.06e-09,21;UBERON:0000203,9.06e-09,21;UBERON:0002021,1.19e-08,10;UBERON:0000411,1.19e-08,10;UBERON:0001950,1.19e-08,10;UBERON:0002619,3.19e-08,17|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.946386496074713,1.37114433605739,0,14.8825757764372,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0.683045484958446,0,0.629484089877886,0.405507724878058,1.65192076945513,0,0.872100625521786,0,0,0.279972843250725,1.43752564364972,0.671130424230945,0,0.336093799142464,0.771778308107841,0,0.515672092277442,8.9019242778223,10.0508286061686,5.70448263155561,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0.768436610643109,2.17748185847803,1.89008313664367,1.89292465216244,14.2825492201902,13.0312439161452,3.79721477566358,2.68367318851062,2.75765635983006,19.82085857989,35.369392649597,35.0222895824235,8.04506355154182,11.4359554503012,11.4600941522487,25.4056529091257,19.6966913511088,27.350886352049,12.6690291753677,15.0913981647049,9.13357284543973,0.454357159999104,0.68014404096107,0,0,0,0,0,0,4.0728881838208,4.60161870960756,4.41636207824877,3.88673531961374,0.422530259330042,0,0,7.11066703153331,0,0,0,3.31133251185274,0.258937883647172,3.71105347662062,6.7659277438793,3.34912026143355,4.15107895060905,3.46662073271032,2.23418543557839,2.13633205260448,0,1.15679485535929,3.5384422077995,0.161766849947409,0.220841518460394,0.484875253135222,0,175.668478206928,127.762491156208,0.510914110417183,0.11981512450592,0,0.254140454146129,28.6100121263211,75.4875994650734,13.9476330845279,81.8712548105622,98.1947356148469,29.9214784165767,42.182728397617,0.101839363850316,1.36847667671102,0.505445516867349,16.8353484709179,2.99277018814219,3.67843367093557,4.32149111532838,7.23383125611432,11.4981683565744,11.5302348256365,13.5867500611607,19.9201595469042,0.215567992932842,0.756424320671277,0.527853372491847,0.657587197282725,0.834141747676794,0.348252166522167,0.823128545631774,0.59710280045548,0,0,0,2.07125772535502,1.40715635988658,1.2604344302271,1.18372367792605,1.96764231747404,2.00547246753592,0.930135779001631,2.41446061259657,0.467061369468678,2.30383789878873,0.656669856316381,0.972825714550269,0.292399974850665,0.219550115291051,0.268412837520744,72.1294523574957,18.6257348406505,0,0,1.91959425481711,1.62565670302307,0.77320476793256,1.4117846723634,2.00140239460383,1.52180500890047,0.474529061544512,1.64698954724011,0.251335208800269,1.1937388322469,1.36474860983384,0.898819408654221,1.08069024937347,0.398282546508734,0.75867160381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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:68203 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5PR73,uniprot:Q3UWU7 | |||
|association_with_transcript=28bp_to_ENSMUST00000057442,NM_001024474,uc007qmv.1_5end | |||
|cluster_id=chr13:52626058..52626176,- | |||
|description=CAGE_peak_1_at_Diras2_5end | |||
|id=chr13:52626058..52626176,- | |||
|ontology_enrichment_celltype=CL:0000117!7.15e-10!23;CL:0000337!7.15e-10!23;CL:0000540!2.27e-07!33;CL:0000047!2.27e-07!33;CL:0000031!2.27e-07!33;CL:0000404!2.27e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.07e-11,23;CL:0000337,6.07e-11,23;CL:0000540,3.62e-08,33;CL:0000047,3.62e-08,33;CL:0000031,3.62e-08,33;CL:0000404,3.62e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.16e-25!71;UBERON:0003075!1.16e-25!71;UBERON:0007284!1.16e-25!71;UBERON:0000033!2.03e-20!63;UBERON:0004121!3.31e-20!102;UBERON:0000924!3.31e-20!102;UBERON:0006601!3.31e-20!102;UBERON:0001049!3.51e-19!52;UBERON:0005068!3.51e-19!52;UBERON:0006241!3.51e-19!52;UBERON:0007135!3.51e-19!52;UBERON:0001017!6.17e-19!73;UBERON:0005743!6.17e-19!73;UBERON:0003056!7.08e-19!49;UBERON:0007811!1.53e-18!86;UBERON:0000955!2.02e-18!50;UBERON:0006238!2.02e-18!50;UBERON:0000073!3.46e-18!75;UBERON:0001016!3.46e-18!75;UBERON:0002616!8.14e-18!49;UBERON:0000153!4.28e-16!94;UBERON:0003080!7.52e-15!40;UBERON:0002780!2.93e-14!39;UBERON:0001890!2.93e-14!39;UBERON:0006240!2.93e-14!39;UBERON:0002020!5.78e-14!34;UBERON:0002791!1.66e-11!29;UBERON:0003528!1.66e-11!29;UBERON:0001893!1.66e-11!29;UBERON:0002021!7.70e-08!10;UBERON:0000411!7.70e-08!10;UBERON:0001950!7.70e-08!10;UBERON:0000956!1.86e-07!21;UBERON:0001869!1.86e-07!21;UBERON:0000203!1.86e-07!21;UBERON:0002619!6.08e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.13e-27,64;UBERON:0003075,7.13e-27,64;UBERON:0007284,7.13e-27,64;UBERON:0000073,2.61e-23,54;UBERON:0001049,7.53e-22,52;UBERON:0005068,7.53e-22,52;UBERON:0006241,7.53e-22,52;UBERON:0007135,7.53e-22,52;UBERON:0003056,9.72e-22,49;UBERON:0010371,3.91e-21,73;UBERON:0001017,5.18e-21,73;UBERON:0010314,8.67e-21,92;UBERON:0001016,1.13e-19,75;UBERON:0004121,1.83e-19,95;UBERON:0000924,1.83e-19,95;UBERON:0006601,1.83e-19,95;UBERON:0000955,6.68e-19,47;UBERON:0006238,6.68e-19,47;UBERON:0002616,3.13e-18,46;UBERON:0003080,3.64e-17,40;UBERON:0002780,1.72e-16,39;UBERON:0001890,1.72e-16,39;UBERON:0006240,1.72e-16,39;UBERON:0002020,3.45e-16,34;UBERON:0003528,2.15e-13,29;UBERON:0002791,2.15e-13,29;UBERON:0001893,2.15e-13,29;UBERON:0000956,9.06e-09,21;UBERON:0001869,9.06e-09,21;UBERON:0000203,9.06e-09,21;UBERON:0002021,1.19e-08,10;UBERON:0000411,1.19e-08,10;UBERON:0001950,1.19e-08,10;UBERON:0002619,3.19e-08,17 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.946386496074713,1.37114433605739,0,14.8825757764372,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0.683045484958446,0,0.629484089877886,0.405507724878058,1.65192076945513,0,0.872100625521786,0,0,0.279972843250725,1.43752564364972,0.671130424230945,0,0.336093799142464,0.771778308107841,0,0.515672092277442,8.9019242778223,10.0508286061686,5.70448263155561,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0.768436610643109,2.17748185847803,1.89008313664367,1.89292465216244,14.2825492201902,13.0312439161452,3.79721477566358,2.68367318851062,2.75765635983006,19.82085857989,35.369392649597,35.0222895824235,8.04506355154182,11.4359554503012,11.4600941522487,25.4056529091257,19.6966913511088,27.350886352049,12.6690291753677,15.0913981647049,9.13357284543973,0.454357159999104,0.68014404096107,0,0,0,0,0,0,4.0728881838208,4.60161870960756,4.41636207824877,3.88673531961374,0.422530259330042,0,0,7.11066703153331,0,0,0,3.31133251185274,0.258937883647172,3.71105347662062,6.7659277438793,3.34912026143355,4.15107895060905,3.46662073271032,2.23418543557839,2.13633205260448,0,1.15679485535929,3.5384422077995,0.161766849947409,0.220841518460394,0.484875253135222,0,175.668478206928,127.762491156208,0.510914110417183,0.11981512450592,0,0.254140454146129,28.6100121263211,75.4875994650734,13.9476330845279,81.8712548105622,98.1947356148469,29.9214784165767,42.182728397617,0.101839363850316,1.36847667671102,0.505445516867349,16.8353484709179,2.99277018814219,3.67843367093557,4.32149111532838,7.23383125611432,11.4981683565744,11.5302348256365,13.5867500611607,19.9201595469042,0.215567992932842,0.756424320671277,0.527853372491847,0.657587197282725,0.834141747676794,0.348252166522167,0.823128545631774,0.59710280045548,0,0,0,2.07125772535502,1.40715635988658,1.2604344302271,1.18372367792605,1.96764231747404,2.00547246753592,0.930135779001631,2.41446061259657,0.467061369468678,2.30383789878873,0.656669856316381,0.972825714550269,0.292399974850665,0.219550115291051,0.268412837520744,72.1294523574957,18.6257348406505,0,0,1.91959425481711,1.62565670302307,0.77320476793256,1.4117846723634,2.00140239460383,1.52180500890047,0.474529061544512,1.64698954724011,0.251335208800269,1.1937388322469,1.36474860983384,0.898819408654221,1.08069024937347,0.398282546508734,0.758671603812327,0.799739588268102,2.25415471346161,0.203651327845314,0.775809948670503,0.0701358198903186,0,0,0,0,0,0.500535317148282,0,0.674586337154561,0,0.241177159752417,0,0,0.648540907100142,0,1.43768206527355,0.744281895337007,0.624075346229121,0,0,0,2.95605104266567,0.947457058852424,0.325929952884052,0.678980343100753,0,1.17254380209271,1.19021820443007,0.585400943573396,1.10344600874334,0.221464689648775,1.91345722388985,2.29408640602033,2.24490476425664,0.867894351489069,0,0,0.491764273019036,0,18.6238684385839,15.2375192569864,3.60656879828686,0.504941854408746,1.89304931649754,2.34263246577983,2.15423397732799,0,0,0.566153061577665,1.21443210502468,2.92255857911312,1.97643888973262,26.3483479465882,2.12910127812403,0.35613120733451,0,2.3095817216155,0,0.971122544619926,0.604647113929502,0.754420319023592,1.47650946440386,1.22974059177571,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,4.42571487479924,1.26042765821917,1.55230420539305,2.7863814554107,4.43350584105684,4.10248280484762,4.60737257685939,3.65357938937519,1.87737366450968,8.68511490541663,0,1.31909002353184,0,0.72375509913787,0.835606408021955,1.64140899745061,0.582961673259701,21.5093350332191,1.19609616558497,0,0,0.753473828018764,0.683471138605126,1.14389086603261,0,0.279902904647316,0,2.86401185404534,0.474503990371703,1.82987520414164,1.62008011232702,0.418176592028937,1.74690050996942,1.88810084938749,3.47144514046411,3.14107130380836,0.648074866458964,0,3.38215763210514,1.49516546043979,1.48912641411388,0.777804753376191,0.387479470433193,0.506868376472335,0.469428954583016,0.781226309063701,0.524296722128554,0.966336483304024,0.864090018773596,4.10814456816632,13.582589424441,10.1683847593179,5.58659538804519,5.19177417435696,5.76175928865668,3.846254384639,2.95379054349154,2.3222283488074,2.28620419965,2.41982844328417,2.92373642219257,2.50150788264857,2.45441494581295,1.81384306892169,0,0.179427713218951,0.503653849092235,11.0118068598349,0.750729901804728,0.915758121336325,0.214368379079066,0,57.0399361043237,40.0482955761244,49.8419096692275,28.8713346337395,53.4364365421101,71.7624202520215,55.3518450190081,71.6010713126511,43.9548136714678,65.7555595924811,0.415149390336707,2.39414924040619,1.36586884603307,2.18796045361465,2.09613162627982,4.04455718590031,2.22246727801615,3.7086310303001,2.88827288632634,1.26348605881899,4.05566879824384,2.82939512079114,1.87283014939765,2.4969809437899,2.5845961030026,1.90517476513229,3.01299247456624,4.62982129112892,3.70877310722976,2.64958056241915,3.08582327146874,2.30718548007139,1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| |||
|short_description=p1@Diras2 | |||
}} |
Revision as of 02:36, 6 August 2015
Short description: | p1@Diras2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Diras2_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 28bp_to_ENSMUST00000057442, NM_001024474, uc007qmv.1_5end |
EntrezGene: | 68203 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.07e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.07e-11 | 23 |
neuron | 3.62e-08 | 33 |
neuronal stem cell | 3.62e-08 | 33 |
neuroblast | 3.62e-08 | 33 |
electrically signaling cell | 3.62e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 7.13e-27 | 64 |
neural plate | 7.13e-27 | 64 |
presumptive neural plate | 7.13e-27 | 64 |
regional part of nervous system | 2.61e-23 | 54 |
neural tube | 7.53e-22 | 52 |
neural rod | 7.53e-22 | 52 |
future spinal cord | 7.53e-22 | 52 |
neural keel | 7.53e-22 | 52 |
pre-chordal neural plate | 9.72e-22 | 49 |
ecto-epithelium | 3.91e-21 | 73 |
central nervous system | 5.18e-21 | 73 |
structure with developmental contribution from neural crest | 8.67e-21 | 92 |
nervous system | 1.13e-19 | 75 |
ectoderm-derived structure | 1.83e-19 | 95 |
ectoderm | 1.83e-19 | 95 |
presumptive ectoderm | 1.83e-19 | 95 |
brain | 6.68e-19 | 47 |
future brain | 6.68e-19 | 47 |
regional part of brain | 3.13e-18 | 46 |
anterior neural tube | 3.64e-17 | 40 |
regional part of forebrain | 1.72e-16 | 39 |
forebrain | 1.72e-16 | 39 |
future forebrain | 1.72e-16 | 39 |
gray matter | 3.45e-16 | 34 |
brain grey matter | 2.15e-13 | 29 |
regional part of telencephalon | 2.15e-13 | 29 |
telencephalon | 2.15e-13 | 29 |
cerebral cortex | 9.06e-09 | 21 |
cerebral hemisphere | 9.06e-09 | 21 |
pallium | 9.06e-09 | 21 |
occipital lobe | 1.19e-08 | 10 |
visual cortex | 1.19e-08 | 10 |
neocortex | 1.19e-08 | 10 |
regional part of cerebral cortex | 3.19e-08 | 17 |