FFCP PHASE1:Mm9::chr16:34263162..34263185,-: Difference between revisions
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{{FFCP|EntrezGene=545156|HGNC=|MCL_coexpression_id=2|UniProt=D3Z559|association_with_transcript=93bp_to_ENSMUST00000114949_5end|description=CAGE_peak_8_at_Kalrn_5end|id=chr16:34263162..34263185,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.92e-21!50;UBERON:0006238!1.92e-21!50;UBERON:0002021!3.53e-20!10;UBERON:0000411!3.53e-20!10;UBERON:0001950!3.53e-20!10;UBERON:0002616!4.32e-20!49;UBERON:0003080!4.71e-18!40;UBERON:0002791!4.92e-18!29;UBERON:0003528!4.92e-18!29;UBERON:0001893!4.92e-18!29;UBERON:0002780!5.45e-17!39;UBERON:0001890!5.45e-17!39;UBERON:0006240!5.45e-17!39;UBERON:0000033!8.94e-17!63;UBERON:0000956!3.98e-16!21;UBERON:0001869!3.98e-16!21;UBERON:0000203!3.98e-16!21;UBERON:0004121!2.82e-15!102;UBERON:0000924!2.82e-15!102;UBERON:0006601!2.82e-15!102;UBERON:0001049!2.83e-15!52;UBERON:0005068!2.83e-15!52;UBERON:0006241!2.83e-15!52;UBERON:0007135!2.83e-15!52;UBERON:0002619!3.00e-15!17;UBERON:0003056!5.85e-15!49;UBERON:0001017!8.14e-15!73;UBERON:0005743!8.14e-15!73;UBERON:0002020!1.22e-14!34;UBERON:0000073!3.25e-14!75;UBERON:0001016!3.25e-14!75;UBERON:0002346!6.88e-14!71;UBERON:0003075!6.88e-14!71;UBERON:0007284!6.88e-14!71;UBERON:0007811!2.79e-11!86;UBERON:0000153!1.09e-09!94|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.70e-50,10;UBERON:0000411,4.70e-50,10;UBERON:0001950,4.70e-50,10;UBERON:0002619,7.79e-35,17;UBERON:0000956,3.34e-33,21;UBERON:0001869,3.34e-33,21;UBERON:0000203,3.34e-33,21;UBERON:0003528,1.16e-27,29;UBERON:0002791,1.16e-27,29;UBERON:0001893,1.16e-27,29;UBERON:0002780,2.52e-23,39;UBERON:0001890,2.52e-23,39;UBERON:0006240,2.52e-23,39;UBERON:0002020,2.53e-23,34;UBERON:0003080,1.08e-22,40;UBERON:0000955,6.48e-22,47;UBERON:0006238,6.48e-22,47;UBERON:0002616,1.80e-19,46;UBERON:0000073,9.28e-19,54;UBERON:0003056,3.73e-18,49;UBERON:0001049,5.45e-17,52;UBERON:0005068,5.45e-17,52;UBERON:0006241,5.45e-17,52;UBERON:0007135,5.45e-17,52;UBERON:0001017,2.65e-15,73;UBERON:0001016,7.79e-15,75;UBERON:0002346,2.05e-13,64;UBERON:0003075,2.05e-13,64;UBERON:0007284,2.05e-13,64;UBERON:0010371,1.68e-11,73;UBERON:0004121,3.17e-11,95;UBERON:0000924,3.17e-11,95;UBERON:0006601,3.17e-11,95;UBERON:0010314,1.12e-08,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0.0958454710182364,0,0,1.14918604276669,0.307213066512487,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,6.8625090422794,0.125654352112864,23.1186345855728,22.7586757023994,0.20778804455956,3.0825839982874,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0.590292695242212,0,0,0,0,0,0,0,0,0,0,14.5100064509248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53453448063988,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0,0.358117032009409,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.4031252979605,48.7944750697608,38.956894913879,29.2150409984269,36.309373547844,33.2373314851468,28.3509450097358,30.621841819247,28.0948293570207,39.8675440048901,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0.280924522409647,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p8@Kalrn}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:545156 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z559 | |||
|association_with_transcript=93bp_to_ENSMUST00000114949_5end | |||
|cluster_id=chr16:34263162..34263185,- | |||
|description=CAGE_peak_8_at_Kalrn_5end | |||
|id=chr16:34263162..34263185,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.92e-21!50;UBERON:0006238!1.92e-21!50;UBERON:0002021!3.53e-20!10;UBERON:0000411!3.53e-20!10;UBERON:0001950!3.53e-20!10;UBERON:0002616!4.32e-20!49;UBERON:0003080!4.71e-18!40;UBERON:0002791!4.92e-18!29;UBERON:0003528!4.92e-18!29;UBERON:0001893!4.92e-18!29;UBERON:0002780!5.45e-17!39;UBERON:0001890!5.45e-17!39;UBERON:0006240!5.45e-17!39;UBERON:0000033!8.94e-17!63;UBERON:0000956!3.98e-16!21;UBERON:0001869!3.98e-16!21;UBERON:0000203!3.98e-16!21;UBERON:0004121!2.82e-15!102;UBERON:0000924!2.82e-15!102;UBERON:0006601!2.82e-15!102;UBERON:0001049!2.83e-15!52;UBERON:0005068!2.83e-15!52;UBERON:0006241!2.83e-15!52;UBERON:0007135!2.83e-15!52;UBERON:0002619!3.00e-15!17;UBERON:0003056!5.85e-15!49;UBERON:0001017!8.14e-15!73;UBERON:0005743!8.14e-15!73;UBERON:0002020!1.22e-14!34;UBERON:0000073!3.25e-14!75;UBERON:0001016!3.25e-14!75;UBERON:0002346!6.88e-14!71;UBERON:0003075!6.88e-14!71;UBERON:0007284!6.88e-14!71;UBERON:0007811!2.79e-11!86;UBERON:0000153!1.09e-09!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.70e-50,10;UBERON:0000411,4.70e-50,10;UBERON:0001950,4.70e-50,10;UBERON:0002619,7.79e-35,17;UBERON:0000956,3.34e-33,21;UBERON:0001869,3.34e-33,21;UBERON:0000203,3.34e-33,21;UBERON:0003528,1.16e-27,29;UBERON:0002791,1.16e-27,29;UBERON:0001893,1.16e-27,29;UBERON:0002780,2.52e-23,39;UBERON:0001890,2.52e-23,39;UBERON:0006240,2.52e-23,39;UBERON:0002020,2.53e-23,34;UBERON:0003080,1.08e-22,40;UBERON:0000955,6.48e-22,47;UBERON:0006238,6.48e-22,47;UBERON:0002616,1.80e-19,46;UBERON:0000073,9.28e-19,54;UBERON:0003056,3.73e-18,49;UBERON:0001049,5.45e-17,52;UBERON:0005068,5.45e-17,52;UBERON:0006241,5.45e-17,52;UBERON:0007135,5.45e-17,52;UBERON:0001017,2.65e-15,73;UBERON:0001016,7.79e-15,75;UBERON:0002346,2.05e-13,64;UBERON:0003075,2.05e-13,64;UBERON:0007284,2.05e-13,64;UBERON:0010371,1.68e-11,73;UBERON:0004121,3.17e-11,95;UBERON:0000924,3.17e-11,95;UBERON:0006601,3.17e-11,95;UBERON:0010314,1.12e-08,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04103896362567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0.0958454710182364,0,0,1.14918604276669,0.307213066512487,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,6.8625090422794,0.125654352112864,23.1186345855728,22.7586757023994,0.20778804455956,3.0825839982874,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0.590292695242212,0,0,0,0,0,0,0,0,0,0,14.5100064509248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53453448063988,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0,0.358117032009409,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.4031252979605,48.7944750697608,38.956894913879,29.2150409984269,36.309373547844,33.2373314851468,28.3509450097358,30.621841819247,28.0948293570207,39.8675440048901,0,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0.280924522409647,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@Kalrn | |||
}} |
Revision as of 08:39, 6 August 2015
Short description: | p8@Kalrn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Kalrn_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 93bp_to_ENSMUST00000114949_5end |
EntrezGene: | 545156 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.70e-50 | 10 |
visual cortex | 4.70e-50 | 10 |
neocortex | 4.70e-50 | 10 |
regional part of cerebral cortex | 7.79e-35 | 17 |
cerebral cortex | 3.34e-33 | 21 |
cerebral hemisphere | 3.34e-33 | 21 |
pallium | 3.34e-33 | 21 |
brain grey matter | 1.16e-27 | 29 |
regional part of telencephalon | 1.16e-27 | 29 |
telencephalon | 1.16e-27 | 29 |
regional part of forebrain | 2.52e-23 | 39 |
forebrain | 2.52e-23 | 39 |
future forebrain | 2.52e-23 | 39 |
gray matter | 2.53e-23 | 34 |
anterior neural tube | 1.08e-22 | 40 |
brain | 6.48e-22 | 47 |
future brain | 6.48e-22 | 47 |
regional part of brain | 1.80e-19 | 46 |
regional part of nervous system | 9.28e-19 | 54 |
pre-chordal neural plate | 3.73e-18 | 49 |
neural tube | 5.45e-17 | 52 |
neural rod | 5.45e-17 | 52 |
future spinal cord | 5.45e-17 | 52 |
neural keel | 5.45e-17 | 52 |
central nervous system | 2.65e-15 | 73 |
nervous system | 7.79e-15 | 75 |
neurectoderm | 2.05e-13 | 64 |
neural plate | 2.05e-13 | 64 |
presumptive neural plate | 2.05e-13 | 64 |
ecto-epithelium | 1.68e-11 | 73 |
ectoderm-derived structure | 3.17e-11 | 95 |
ectoderm | 3.17e-11 | 95 |
presumptive ectoderm | 3.17e-11 | 95 |
structure with developmental contribution from neural crest | 1.12e-08 | 92 |